Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00045
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 137 6e-33
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 137 6e-33
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 137 6e-33
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 137 6e-33
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 137 6e-33
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 137 6e-33
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 111 4e-25
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 111 4e-25
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 137 bits (332), Expect = 6e-33
Identities = 63/85 (74%), Positives = 67/85 (78%)
Frame = +1
Query: 1 IEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXKLPRKTHKGLR 180
IE KV WAREHLEK + VD+VFAQDEMID I SRWHT KLPRKTHKGLR
Sbjct: 190 IEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLR 249
Query: 181 KVACIGAWHPSRVSFTVARAGQKGY 255
KVACIGAWHPSRV+FTVARAGQKG+
Sbjct: 250 KVACIGAWHPSRVAFTVARAGQKGF 274
Score = 111 bits (268), Expect = 4e-25
Identities = 51/85 (60%), Positives = 65/85 (76%)
Frame = +3
Query: 255 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYXEVNNDFVMIK 434
HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP Y VN D++M++
Sbjct: 275 HHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 331
Query: 435 GCCMGPKKRIITLRKSLRVHTKRAA 509
G +GPKKR+ITLRKSL TKR A
Sbjct: 332 GAVLGPKKRLITLRKSLITQTKRVA 356
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +2
Query: 512 EKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 628
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 358 EKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 137 bits (332), Expect = 6e-33
Identities = 63/85 (74%), Positives = 67/85 (78%)
Frame = +1
Query: 1 IEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXKLPRKTHKGLR 180
IE KV WAREHLEK + VD+VFAQDEMID I SRWHT KLPRKTHKGLR
Sbjct: 190 IEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLR 249
Query: 181 KVACIGAWHPSRVSFTVARAGQKGY 255
KVACIGAWHPSRV+FTVARAGQKG+
Sbjct: 250 KVACIGAWHPSRVAFTVARAGQKGF 274
Score = 111 bits (268), Expect = 4e-25
Identities = 51/85 (60%), Positives = 65/85 (76%)
Frame = +3
Query: 255 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYXEVNNDFVMIK 434
HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP Y VN D++M++
Sbjct: 275 HHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 331
Query: 435 GCCMGPKKRIITLRKSLRVHTKRAA 509
G +GPKKR+ITLRKSL TKR A
Sbjct: 332 GAVLGPKKRLITLRKSLITQTKRVA 356
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +2
Query: 512 EKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 628
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 358 EKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 137 bits (332), Expect = 6e-33
Identities = 63/85 (74%), Positives = 67/85 (78%)
Frame = +1
Query: 1 IEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXKLPRKTHKGLR 180
IE KV WAREHLEK + VD+VFAQDEMID I SRWHT KLPRKTHKGLR
Sbjct: 92 IEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLR 151
Query: 181 KVACIGAWHPSRVSFTVARAGQKGY 255
KVACIGAWHPSRV+FTVARAGQKG+
Sbjct: 152 KVACIGAWHPSRVAFTVARAGQKGF 176
Score = 111 bits (268), Expect = 4e-25
Identities = 51/85 (60%), Positives = 65/85 (76%)
Frame = +3
Query: 255 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYXEVNNDFVMIK 434
HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP Y VN D++M++
Sbjct: 177 HHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 233
Query: 435 GCCMGPKKRIITLRKSLRVHTKRAA 509
G +GPKKR+ITLRKSL TKR A
Sbjct: 234 GAVLGPKKRLITLRKSLITQTKRVA 258
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +2
Query: 512 EKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 628
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 260 EKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 137 bits (332), Expect = 6e-33
Identities = 63/85 (74%), Positives = 67/85 (78%)
Frame = +1
Query: 1 IEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXKLPRKTHKGLR 180
IE KV WAREHLEK + VD+VFAQDEMID I SRWHT KLPRKTHKGLR
Sbjct: 190 IEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLR 249
Query: 181 KVACIGAWHPSRVSFTVARAGQKGY 255
KVACIGAWHPSRV+FTVARAGQKG+
Sbjct: 250 KVACIGAWHPSRVAFTVARAGQKGF 274
Score = 111 bits (268), Expect = 4e-25
Identities = 51/85 (60%), Positives = 65/85 (76%)
Frame = +3
Query: 255 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYXEVNNDFVMIK 434
HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP Y VN D++M++
Sbjct: 275 HHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 331
Query: 435 GCCMGPKKRIITLRKSLRVHTKRAA 509
G +GPKKR+ITLRKSL TKR A
Sbjct: 332 GAVLGPKKRLITLRKSLITQTKRVA 356
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +2
Query: 512 EKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 628
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 358 EKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 137 bits (332), Expect = 6e-33
Identities = 63/85 (74%), Positives = 67/85 (78%)
Frame = +1
Query: 1 IEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXKLPRKTHKGLR 180
IE KV WAREHLEK + VD+VFAQDEMID I SRWHT KLPRKTHKGLR
Sbjct: 92 IEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLR 151
Query: 181 KVACIGAWHPSRVSFTVARAGQKGY 255
KVACIGAWHPSRV+FTVARAGQKG+
Sbjct: 152 KVACIGAWHPSRVAFTVARAGQKGF 176
Score = 111 bits (268), Expect = 4e-25
Identities = 51/85 (60%), Positives = 65/85 (76%)
Frame = +3
Query: 255 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYXEVNNDFVMIK 434
HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP Y VN D++M++
Sbjct: 177 HHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 233
Query: 435 GCCMGPKKRIITLRKSLRVHTKRAA 509
G +GPKKR+ITLRKSL TKR A
Sbjct: 234 GAVLGPKKRLITLRKSLITQTKRVA 258
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +2
Query: 512 EKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 628
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 260 EKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 137 bits (332), Expect = 6e-33
Identities = 63/85 (74%), Positives = 67/85 (78%)
Frame = +1
Query: 1 IEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXKLPRKTHKGLR 180
IE KV WAREHLEK + VD+VFAQDEMID I SRWHT KLPRKTHKGLR
Sbjct: 190 IEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLR 249
Query: 181 KVACIGAWHPSRVSFTVARAGQKGY 255
KVACIGAWHPSRV+FTVARAGQKG+
Sbjct: 250 KVACIGAWHPSRVAFTVARAGQKGF 274
Score = 111 bits (268), Expect = 4e-25
Identities = 51/85 (60%), Positives = 65/85 (76%)
Frame = +3
Query: 255 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYXEVNNDFVMIK 434
HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP Y VN D++M++
Sbjct: 275 HHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 331
Query: 435 GCCMGPKKRIITLRKSLRVHTKRAA 509
G +GPKKR+ITLRKSL TKR A
Sbjct: 332 GAVLGPKKRLITLRKSLITQTKRVA 356
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +2
Query: 512 EKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 628
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 358 EKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 111 bits (268), Expect = 4e-25
Identities = 51/85 (60%), Positives = 65/85 (76%)
Frame = +3
Query: 255 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYXEVNNDFVMIK 434
HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP Y VN D++M++
Sbjct: 227 HHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 283
Query: 435 GCCMGPKKRIITLRKSLRVHTKRAA 509
G +GPKKR+ITLRKSL TKR A
Sbjct: 284 GAVLGPKKRLITLRKSLITQTKRVA 308
Score = 98.7 bits (235), Expect = 4e-21
Identities = 45/65 (69%), Positives = 48/65 (73%)
Frame = +1
Query: 61 VFAQDEMIDCIXXXXXXXXXXXXSRWHTXKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 240
V A +MID I SRWHT KLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 241 GQKGY 255
GQKG+
Sbjct: 222 GQKGF 226
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +2
Query: 512 EKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 628
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 310 EKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 111 bits (268), Expect = 4e-25
Identities = 51/85 (60%), Positives = 65/85 (76%)
Frame = +3
Query: 255 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYXEVNNDFVMIK 434
HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP Y VN D++M++
Sbjct: 227 HHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 283
Query: 435 GCCMGPKKRIITLRKSLRVHTKRAA 509
G +GPKKR+ITLRKSL TKR A
Sbjct: 284 GAVLGPKKRLITLRKSLITQTKRVA 308
Score = 98.7 bits (235), Expect = 4e-21
Identities = 45/65 (69%), Positives = 48/65 (73%)
Frame = +1
Query: 61 VFAQDEMIDCIXXXXXXXXXXXXSRWHTXKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 240
V A +MID I SRWHT KLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 241 GQKGY 255
GQKG+
Sbjct: 222 GQKGF 226
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +2
Query: 512 EKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 628
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 310 EKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,030,804
Number of Sequences: 27780
Number of extensions: 363507
Number of successful extensions: 959
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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