Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00042
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   2.5  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   4.4  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    24   4.4  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
 Frame = -3

Query: 498 CTKNNYVILTFSGAIIEECAYYIVYILIRYFRSLL-------AILSQINFIRRLFIIELC 340
           C K  YV   F  +I+     YI+ ++++ F++ L         +S  +    +F + L 
Sbjct: 715 CDKPEYVSDVFLMSIVLFLGTYIISVILKDFKNALFFPAVVRQFISDFSVTIAIFSMTLL 774

Query: 339 ELFTR 325
           ++FTR
Sbjct: 775 DVFTR 779


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 197  CLSTVFFFLLKYD 235
            C+ST FFFL +YD
Sbjct: 1052 CVSTPFFFLDEYD 1064


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 134 KYLVYKYERNFERFYTSRQH*Y 69
           +Y+V +YE + E  Y  RQ+ Y
Sbjct: 180 RYVVQRYESSEEELYARRQNCY 201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,063
Number of Sequences: 2352
Number of extensions: 12774
Number of successful extensions: 71
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)