Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00041
(599 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.49
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.49
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.49
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.49
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 24 0.85
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 24 0.85
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 24 0.85
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 22 4.6
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 22 4.6
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 6.0
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 7.9
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 7.9
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 7.9
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.49
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 508 RHRYRWNLVMYM 543
RHR RW+ VMYM
Sbjct: 693 RHRKRWSQVMYM 704
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.49
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 508 RHRYRWNLVMYM 543
RHR RW+ VMYM
Sbjct: 693 RHRKRWSQVMYM 704
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.49
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 508 RHRYRWNLVMYM 543
RHR RW+ VMYM
Sbjct: 693 RHRKRWSQVMYM 704
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.49
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 508 RHRYRWNLVMYM 543
RHR RW+ VMYM
Sbjct: 693 RHRKRWSQVMYM 704
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 24.2 bits (50), Expect = 0.85
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +2
Query: 353 SNTDNEHDAPNGEGKIVKTEEKSDCSDTNKK 445
+N+D + D +G+G +E D +T +
Sbjct: 178 ANSDEQDDGDDGQGSSTNNDEDDDDEETGDR 208
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 24.2 bits (50), Expect = 0.85
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +2
Query: 353 SNTDNEHDAPNGEGKIVKTEEKSDCSDTNKK 445
+N+D + D +G+G +E D +T +
Sbjct: 178 ANSDEQDDGDDGQGSSTNNDEDDDDEETGDR 208
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 24.2 bits (50), Expect = 0.85
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +2
Query: 353 SNTDNEHDAPNGEGKIVKTEEKSDCSDTNKK 445
+N+D + D +G+G +E D +T +
Sbjct: 178 ANSDEQDDGDDGQGSSTNNDEDDDDEETGDR 208
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 21.8 bits (44), Expect = 4.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 127 PATASMSLRSASPGDRAAPADC 62
P ASMS +S S + A+P C
Sbjct: 155 PNEASMSPQSTSSNNSASPKAC 176
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 21.8 bits (44), Expect = 4.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 127 PATASMSLRSASPGDRAAPADC 62
P ASMS +S S + A+P C
Sbjct: 175 PNEASMSPQSTSSNNSASPKAC 196
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 103 GGSWRPSPAACCSNTGPACGTP 168
GG+ +P P +C + G G P
Sbjct: 40 GGAVQPDPGSCDPSVGLRQGIP 61
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.0 bits (42), Expect = 7.9
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 120 VAGGLLLEHGPGLRDPCEKELVDALGNMPPQKRE 221
VAGG L+ H P P + + + G P R+
Sbjct: 523 VAGGTLIVHCPFAGHPVDSVVWERDGRQLPINRK 556
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.0 bits (42), Expect = 7.9
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +1
Query: 118 PSPAACCSNTGPACGTPARRNSLTRWATC 204
PSP A P +P + T ATC
Sbjct: 263 PSPTAGAGGLPPQVPSPRSQRRYTGRATC 291
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 21.0 bits (42), Expect = 7.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 118 ASMSLRSASPGDRAAPADCTTPAVSSS 38
AS + +A+P A P TP+ S+S
Sbjct: 206 ASKASPAAAPRSVATPTGIPTPSTSAS 232
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,164
Number of Sequences: 336
Number of extensions: 2736
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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