Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00041
(599 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.097
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 28 0.91
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 27 1.6
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 27 2.1
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 2.8
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 2.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 2.8
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 26 3.7
SPCC24B10.14c |xlf1|nej1, mug104|xrcc4 like factor|Schizosacchar... 26 4.8
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 26 4.8
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 25 6.4
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 25 6.4
SPBC530.01 |gyp1||GTPase activating protein Gyp1 |Schizosaccharo... 25 8.5
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 25 8.5
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac... 25 8.5
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 25 8.5
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 25 8.5
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.097
Identities = 19/77 (24%), Positives = 31/77 (40%)
Frame = -2
Query: 262 SNLLKXCCAXAVRSSRFCGGMLPSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGD 83
SNL + R L + +G+ P P +S A+ + + PG
Sbjct: 1224 SNLEDRAARIKAEAQRRMNERLAALGIKPRQKGTPSPAPVNSATSTPVAAPTAQQIQPGK 1283
Query: 82 RAAPADCTTPAVSSSIA 32
+A+ PAVS+SI+
Sbjct: 1284 QASAVSSNVPAVSASIS 1300
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 151 GPCSSNRPPATASMSLRSASPGDRAA 74
GP S+ PP AS + +PGDR+A
Sbjct: 1726 GPPSAPPPPLPASSAPSVPNPGDRSA 1751
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 28.3 bits (60), Expect = 0.91
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 193 SASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPAVSSS 38
S S+SS S S+ SS+ + + S +S+S ++ TTPA SSS
Sbjct: 186 SKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITSTTPASSSS 237
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 196 PSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAP 71
P+A T+ S+ + P P + RP + SA+P D A P
Sbjct: 343 PAAPTTVSSERNAPPYPSAPTRPTPPTVQTSSSAAPVDSAEP 384
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 27.1 bits (57), Expect = 2.1
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -2
Query: 187 STSSFSQGSRRPGPCSSNRPPATASMSLRS--ASPGDRAAPADCTTPAVSSSIA 32
S+S S G +S P +++S++L S AS AA +TPAVSS+ A
Sbjct: 201 SSSVASSSEISAGSATSYVPTSSSSIALSSVVASASVSAANKGVSTPAVSSAAA 254
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 26.6 bits (56), Expect = 2.8
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = -2
Query: 184 TSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPAVSSSIAYELSGV 14
TSSF+ S GP SS P ++S S S + ++PA VSS+++Y S V
Sbjct: 633 TSSFNVNS--VGPSSSQTTPTSSSSITGSQSLKETSSPA-----YVSSTVSYTSSSV 682
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -2
Query: 196 PSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTP 53
P +T + +R P P N+P AT +S+ P ++ PA P
Sbjct: 972 PRLATGGSTAAARGPRPVVQNKPAATKPVSM----PAAKSKPAPMANP 1015
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 2.8
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -2
Query: 193 SASTSSFSQGSRRPGPCSS---NRPPATASMSLRSASPGDRAAPADCTTPAVSSSI 35
+A TSS + + P SS + P T+S +L +++P ++ + +TP SSSI
Sbjct: 706 TAITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSI 761
Score = 25.4 bits (53), Expect = 6.4
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -2
Query: 229 VRSSRFCGGMLPSASTSSFSQGSRRPGPCSSNRP-PATASMSLRSASPGDRAAPADCTTP 53
+ SS P S+S + + + N P T+S L S++P + + +TP
Sbjct: 636 ITSSSVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTP 695
Query: 52 AVSSSI 35
SSS+
Sbjct: 696 ITSSSV 701
Score = 25.4 bits (53), Expect = 6.4
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -2
Query: 232 AVRSSRFCGGMLPSASTSSFSQGSRRPGPCSSNRP-PATASMSLRSASPGDRAAPADCTT 56
A+ SS P S+S + + + N P T+S L S++P ++ + +T
Sbjct: 707 AITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSILNSST 766
Query: 55 PAVSSSI 35
P SSS+
Sbjct: 767 PITSSSV 773
Score = 25.4 bits (53), Expect = 6.4
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -2
Query: 229 VRSSRFCGGMLPSASTSSFSQGSRRPGPCSSNRP-PATASMSLRSASPGDRAAPADCTTP 53
+ SS P S+S + + + N P T+S L S++P ++ + +TP
Sbjct: 1944 ITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNTSTP 2003
Query: 52 AVSSSI 35
SSS+
Sbjct: 2004 ITSSSV 2009
Score = 25.4 bits (53), Expect = 6.4
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -2
Query: 193 SASTSSFSQGSRRPGPCSS---NRPPATASMSLRSASPGDRAAPADCTTPAVSSSI 35
+A TSS S P SS + P T+S + S++P + + +TP SSS+
Sbjct: 3346 TAITSSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSV 3401
Score = 25.0 bits (52), Expect = 8.5
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 190 ASTSSFSQGSRRPGPCSSNRP-PATASMSLRSASPGDRAAPADCTTPAVSSSI 35
A+T+ + ++ P + N P T+S L S++P ++ + +TP SSS+
Sbjct: 361 ANTTPENTSTQITSPTAVNSSTPITSSSVLNSSTPITSSSILNTSTPITSSSV 413
Score = 25.0 bits (52), Expect = 8.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -2
Query: 184 TSSFSQGSRRPGPCSS---NRPPATASMSLRSASPGDRAAPADCTTPAVSSSI 35
TSS S P SS + P T+S L S++P + + +TP SSS+
Sbjct: 409 TSSSVLNSSTPITSSSILNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSV 461
Score = 25.0 bits (52), Expect = 8.5
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = -2
Query: 184 TSSFSQGSRRPGPCSS---NRPPATASMSLRSASPGDRAAPADCTTPAVSSSI 35
TSS S P SS + P T+S +L +++P ++ + +TP SSS+
Sbjct: 601 TSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSV 653
Score = 25.0 bits (52), Expect = 8.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -2
Query: 184 TSSFSQGSRRPGPCSS---NRPPATASMSLRSASPGDRAAPADCTTPAVSSSI 35
TSS + + P SS + P T+S L S++P + + +TP SSS+
Sbjct: 625 TSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSV 677
Score = 25.0 bits (52), Expect = 8.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -2
Query: 184 TSSFSQGSRRPGPCSS---NRPPATASMSLRSASPGDRAAPADCTTPAVSSSI 35
TSS S P SS + P T+S L S++P + + +TP SSS+
Sbjct: 745 TSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSV 797
Score = 25.0 bits (52), Expect = 8.5
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -2
Query: 229 VRSSRFCGGMLPSASTSSFSQGSRRPGPCSSNR-PPATASMSLRSASPGDRAAPADCTTP 53
+ SS P S++ + + + N PP T+S + S++P + + +TP
Sbjct: 1620 ITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSSTVVNSSTPITSSTVVNTSTP 1679
Query: 52 AVSSSI 35
SS++
Sbjct: 1680 ITSSTV 1685
Score = 25.0 bits (52), Expect = 8.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -2
Query: 184 TSSFSQGSRRPGPCSS---NRPPATASMSLRSASPGDRAAPADCTTPAVSSSI 35
TSS + + P SS + P T+S L S++P + + +TP SSS+
Sbjct: 1873 TSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSV 1925
Score = 25.0 bits (52), Expect = 8.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -2
Query: 184 TSSFSQGSRRPGPCSS---NRPPATASMSLRSASPGDRAAPADCTTPAVSSSI 35
TSS + + P SS + P T+S L S++P + + +TP SSS+
Sbjct: 1909 TSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSV 1961
Score = 25.0 bits (52), Expect = 8.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -2
Query: 184 TSSFSQGSRRPGPCSS---NRPPATASMSLRSASPGDRAAPADCTTPAVSSSI 35
TSS + + P SS + P T+S L S++P + + +TP SSS+
Sbjct: 2065 TSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSV 2117
Score = 25.0 bits (52), Expect = 8.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -2
Query: 184 TSSFSQGSRRPGPCSS---NRPPATASMSLRSASPGDRAAPADCTTPAVSSSI 35
TSS + + P SS + P T+S L S++P + + +TP SSS+
Sbjct: 2101 TSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSV 2153
Score = 25.0 bits (52), Expect = 8.5
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -2
Query: 193 SASTSSFSQGSRRPGPCSS---NRPPATASMSLRSASPGDRAAPADCTTPAVSSSI 35
+A TSS S P SS + P T+S + S++P + + +TP SSS+
Sbjct: 3118 TAITSSSILNSSTPITSSSILNSSTPITSSTVVNSSTPITSSTTLNTSTPITSSSV 3173
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 26.2 bits (55), Expect = 3.7
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = -2
Query: 514 GACGYLYIRVIASVWVVSSQYR 449
GAC Y IR+++ +W+ +S ++
Sbjct: 581 GACIYNRIRIVSELWIKNSDWK 602
>SPCC24B10.14c |xlf1|nej1, mug104|xrcc4 like
factor|Schizosaccharomyces pombe|chr 3|||Manual
Length = 203
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 476 ASNNPYV*IATGTDIVGIWSCIC 544
A +N V + TD+V +WSC C
Sbjct: 20 AESNEAVQVIHITDLVRVWSCTC 42
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 25.8 bits (54), Expect = 4.8
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = -2
Query: 199 LPSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPAVSSSIAYELS 20
L +A+++ + G+ + ++ T+S++ S +P ++ A TP SSS+A ++
Sbjct: 48 LEAAASAISTNGAAKEAATAAGDAETTSSVAA-SVTPAASSSVAASVTPVASSSVAASVT 106
Query: 19 GV 14
V
Sbjct: 107 PV 108
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Frame = -1
Query: 377 RRARCQCWSAWLRGNF-----QAPVACSPWGAAPCRAP 279
RRA C++ +G+ + P C+PWGA P
Sbjct: 372 RRANKPCFNKETKGSIFSKENKGPFTCNPWGAKKVSPP 409
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 25.4 bits (53), Expect = 6.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 223 SSRFCGGMLPSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASP 89
SS+F L S ++ ++ + P P SS +PP+T + +ASP
Sbjct: 11 SSKFASLGLGSLKSTPKARETTEPPPPSSQQPPSTPN-GKEAASP 54
>SPBC530.01 |gyp1||GTPase activating protein Gyp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 25.0 bits (52), Expect = 8.5
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -2
Query: 187 STSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPAVSSSIAYE 26
STSS +Q R S++PP RS + + A+ + P+ SS++ E
Sbjct: 44 STSSKAQPFRLDDSVYSDQPPKDHISLARSITRPESASESKIYAPSARSSLSLE 97
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 25.0 bits (52), Expect = 8.5
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +2
Query: 218 GRSDGLSATVLKKIAFRQIHKVLDMEPLPKANTQRAPGSSRATRRSNTDNEHDAPNGEGK 397
G+S SA K + KV PK ++Q +P SS T S TD D+ +G
Sbjct: 35 GKSALRSALEKKNRKSKSKPKVTITSDTPKVSSQHSPVSSAYTGDSTTD--LDSKSGHSS 92
Query: 398 IVKTEEK 418
K K
Sbjct: 93 SQKLSNK 99
>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
complex subunit, Fip1 homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -2
Query: 208 GGMLPSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASP 89
G P+A ++ SRR +N P T+S + A P
Sbjct: 244 GAATPNAYVNNNPSSSRRESESPANSPNITSSAGMTHAQP 283
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 296 PLPKANTQRAPGSSRATRRSNTDNEHDAP 382
PLP +N Q SS + N + + D P
Sbjct: 250 PLPPSNVQSNSSSSENVPKPNAETQEDLP 278
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 521 RYRCLWLSIHKGY 483
RY CLWLS H Y
Sbjct: 261 RYECLWLSCHFYY 273
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,246,383
Number of Sequences: 5004
Number of extensions: 41743
Number of successful extensions: 248
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 262236260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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