Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00041
(599 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical ... 54 1e-07
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 33 0.12
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 31 0.63
U29097-5|AAA68413.1| 222|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z83107-7|CAB05501.2| 537|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 30 1.5
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 30 1.5
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 1.5
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 30 1.5
AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical ... 30 1.5
Z67755-8|CAE17847.1| 209|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF043693-11|AAB97541.2| 213|Caenorhabditis elegans Hypothetical... 29 2.5
AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical... 29 2.5
U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeo... 29 3.3
U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeo... 29 3.3
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 28 5.9
U80454-4|AAB37876.3| 896|Caenorhabditis elegans Prion-like-(q/n... 27 7.7
AF045646-5|AAK29828.1| 225|Caenorhabditis elegans Hypothetical ... 27 7.7
>AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical
protein Y95B8A.7 protein.
Length = 608
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = +3
Query: 6 PNWTPLNSYAMELLTAGVVQSAGAALSPGEALRRLMEAVAGGLLLEHGPGLRDPCEKELV 185
P L+ Y MEL+ + ++ S+ +L +A +R++EA+A G L + L DPCE
Sbjct: 465 PEVACLDDYKMELIVSNIIDSSPMSLGLSDAFKRIVEALASGYL--YSAILSDPCETSRP 522
Query: 186 DALGNMPPQKREDLTAXAQQXLRRL 260
+ L + +++ LTA AQ +R++
Sbjct: 523 NVLDALTDEQKHSLTALAQNFVRQI 547
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 233 LSATVLKKIAFRQIHKVLDMEPLPKANTQRAPGSSRATRR--SNTDNEHDAPNGEGKIVK 406
L+ +++IAF QIH++L ++ L +T P + +R + +N +A N + V
Sbjct: 539 LAQNFVRQIAFNQIHEILGIDRL--QDTIDLPEDAPMLKRPLESNENAENAENLDDSPVS 596
Query: 407 TEEKSD 424
+EK D
Sbjct: 597 KKEKLD 602
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = -2
Query: 190 ASTSSFSQGSRRPGPCSSNRP-PATASMS---LRSASPGDRAAPADCTTPAVSSSIAYEL 23
A S+ ++ + P P + P P TAS + A+P D AAPAD T A +S A
Sbjct: 408 APASAAAEETPAPAPAAEETPAPETASAAPDAAGGAAPADVAAPADVATTAPETSSAQSA 467
Query: 22 SG 17
+G
Sbjct: 468 AG 469
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 31.1 bits (67), Expect = 0.63
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = -2
Query: 196 PSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPAVSSS 38
P AST+S S S GP S++ P+TAS S S + G TT S++
Sbjct: 541 PGASTTSGSTQSTTSGP-STSSGPSTASRSTVSTTSGPSTTSGPSTTSGPSTT 592
>U29097-5|AAA68413.1| 222|Caenorhabditis elegans Hypothetical
protein F18C5.5 protein.
Length = 222
Score = 30.7 bits (66), Expect = 0.83
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = -2
Query: 211 CGGMLPSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPA 50
C ++P AS +G R P S A + SLR AS G R APA T PA
Sbjct: 16 CYEVVPRASALR-PRGDVRRSPLPSLSAYAPFAKSLRPASTGIRRAPAVVTLPA 68
>Z83107-7|CAB05501.2| 537|Caenorhabditis elegans Hypothetical
protein F32A7.6 protein.
Length = 537
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 45 LTAGVVQSAGAALSPGEALRRLMEAVAGGLLLEHGPGLRDPC 170
L+ GV+ ++GA + GE ++ AV+GG + GL C
Sbjct: 298 LSFGVIDASGAPAAYGEGCSSVLAAVSGGDAMIQTTGLESTC 339
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = -2
Query: 223 SSRFCGGMLPSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPAVS 44
SS S STS S S PG SS+ P +T S+ S P + T S
Sbjct: 552 SSELPNSSTDSGSTSEPSMSSEAPGASSSDFPSSTPDSSVSSEEPNASSNSVSTETSPGS 611
Query: 43 S 41
S
Sbjct: 612 S 612
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = -2
Query: 223 SSRFCGGMLPSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPAVS 44
SS S STS S S PG SS+ P +T S+ S P + T S
Sbjct: 552 SSELPNSSTDSGSTSEPSMSSEAPGASSSDFPSSTPDSSVSSEEPNASSNSVSTETSPGS 611
Query: 43 S 41
S
Sbjct: 612 S 612
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = -2
Query: 223 SSRFCGGMLPSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPAVS 44
SS S STS S S PG SS+ P +T S+ S P + T S
Sbjct: 552 SSELPNSSTDSGSTSEPSMSSEAPGASSSDFPSSTPDSSVSSEEPNASSNSVSTETSPGS 611
Query: 43 S 41
S
Sbjct: 612 S 612
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = -2
Query: 223 SSRFCGGMLPSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPAVS 44
SS S STS S S PG SS+ P +T S+ S P + T S
Sbjct: 552 SSELPNSSTDSGSTSEPSMSSEAPGASSSDFPSSTPDSSVSSEEPNASSNSVSTETSPGS 611
Query: 43 S 41
S
Sbjct: 612 S 612
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = -2
Query: 190 ASTSSFSQGSRRPGPCSSNRP-PAT---ASMSLRSASPGDRAAPAD-CTTPAVSS 41
ASTS S S P P +S P P+T +SM +S P +P + TTP+ S
Sbjct: 835 ASTSGSSVASSSPAPSTSQNPNPSTSSGSSMITQSPYPSQSTSPVESSTTPSPGS 889
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 317 QRAPGSSRATRRSNTDNEHDAPNGEGKIVKTEEKSDCSDT 436
Q++PG + T RSN H P G I ++ KS DT
Sbjct: 3256 QKSPGDQKQTERSNGWTGHVMPRRRGHINRSMVKSPDDDT 3295
>AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical
protein R119.5 protein.
Length = 659
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -2
Query: 193 SASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAA 74
S STS+ SQ S PC S P +T S R SP +A
Sbjct: 547 SPSTSTESQVSEDEEPCCSTDPASTTSRRRRIRSPKSESA 586
>Z67755-8|CAE17847.1| 209|Caenorhabditis elegans Hypothetical
protein F54F7.8 protein.
Length = 209
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -3
Query: 414 SSVFTIFPSPLGASCSLSVLERLVAREL---PGARCVFALGSGSMS 286
SSVF++ P P+G S LE L A + P +F G+ S+S
Sbjct: 71 SSVFSLPPPPVGVSVPNPFLEALTAHFMSLQPTFNAIFPFGANSLS 116
>AF043693-11|AAB97541.2| 213|Caenorhabditis elegans Hypothetical
protein C34B2.9 protein.
Length = 213
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2
Query: 193 SASTSSFSQGSRRPGPCSSNRPPATASMSLRSAS 92
S ST+S S SRRP SSN PP+++ + L +S
Sbjct: 96 STSTASSSASSRRP-IISSNNPPSSSPVPLHVSS 128
>AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical
protein F07B7.14 protein.
Length = 401
Score = 29.1 bits (62), Expect = 2.5
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Frame = -2
Query: 274 NLPESNLLKX---CCAXAVRSSRFCGGMLPSASTSSFSQGSRRPGPCSSNRP---PATAS 113
NLP+ N+ C RSS LP + S++ RRP P SS++P P
Sbjct: 39 NLPKENVSTWPASCRRPEPRSSSQPKENLPEENISTWPASCRRPEPRSSSQPKENPPKEK 98
Query: 112 MSLRSASPGDRAAPADCTTPAVSSSIAYEL 23
+S R AS C P SSS+ L
Sbjct: 99 ISTRLAS---------CRRPRTSSSLPLSL 119
>U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform a protein.
Length = 632
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 196 PSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPA 68
PSASTSS + + P S+ + + A MS+ S P + A
Sbjct: 60 PSASTSSATSATEEPATSSAPQLASLAPMSMSSEQPSSSFSSA 102
>U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform b protein.
Length = 641
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 196 PSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPA 68
PSASTSS + + P S+ + + A MS+ S P + A
Sbjct: 60 PSASTSSATSATEEPATSSAPQLASLAPMSMSSEQPSSSFSSA 102
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -2
Query: 193 SASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPAVSSSI 35
++ S + S P P PP TA S+ S+S G AD +V S++
Sbjct: 222 ASGASPYPSASSNPAPPPPRPPPVTAQTSVSSSSGG--TIQADTIRASVMSAV 272
>U80454-4|AAB37876.3| 896|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 66
protein.
Length = 896
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 311 NTQRAPGSSRATRRSNTDNEHDAPNGEGKIVKTEEKSDCSDTNKK*SILRRHDPHASNN 487
N Q P + A N N +A N + +K+D + N + R++DP+ N+
Sbjct: 599 NAQSDPNAHNAQNVQNAPNVQNASNVQNSQNGQNDKNDPNAQNSQNGQNRQNDPNVQNS 657
>AF045646-5|AAK29828.1| 225|Caenorhabditis elegans Hypothetical
protein F56B3.3 protein.
Length = 225
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -2
Query: 196 PSASTSSFSQGSRRPGPCSSNRPPATA 116
PS+STSS SR PG C RP +TA
Sbjct: 109 PSSSTSS----SRTPGFCRKGRPTSTA 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,894,094
Number of Sequences: 27780
Number of extensions: 262296
Number of successful extensions: 1105
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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