Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00041
(599 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 25 0.43
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 25 0.57
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 24 1.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 24 1.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 24 1.3
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 4.0
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 4.0
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 4.0
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 5.3
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 7.0
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 7.0
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 7.0
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 7.0
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 7.0
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.2
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.2
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 9.2
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 25.4 bits (53), Expect = 0.43
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = -2
Query: 166 GSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPAVSSSIAYELSG 17
G PG RP T + +++PG + PA VS + SG
Sbjct: 211 GRHLPGHAQMGRPSYTTATMATTSTPGSGSLPASPADSGVSDVESSTSSG 260
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 25.0 bits (52), Expect = 0.57
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 193 SASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAP 71
S + + ++ S G +S+RPPA+AS + A + P
Sbjct: 252 SGNAAGNNEDSSDSGAAASDRPPASASSNEHEAESEHTSTP 292
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
N +N NY +++ + I I +PV +Y
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
N +N NY +++ + I I +PV +Y
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
N +N NY +++ + I I +PV +Y
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
N +N NY +++ + I I +PV +Y
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
N +N NY +++ + I I +PV +Y
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
N +N NY +++ + I I +PV +Y
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
N +N NY +++ + I I +PV +Y
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
N +N NY +++ + I I +PV +Y
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
N +N NY +++ + I I +PV +Y
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
N +N NY +++ + I I +PV +Y
Sbjct: 332 NNYNKHNYNKLYYNINYIEQIPIPVPVY 359
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
N +N NY +++ + I I +PV +Y
Sbjct: 332 NNYNKHNYNKLYYNINYIEQIPIPVPVY 359
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 502 YLYIRVIASVWVVSSQY 452
Y Y+R + W+ SSQY
Sbjct: 234 YYYMREMLPYWMSSSQY 250
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 502 YLYIRVIASVWVVSSQY 452
Y Y+R + W+ SSQY
Sbjct: 234 YYYMREMLPYWMSSSQY 250
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 482 C*RVGRVFSISITFC 438
C R+GR+ IS FC
Sbjct: 5 CSRLGRILLISAVFC 19
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
+ +N NY + + + I I VPV +Y
Sbjct: 92 SNYNNNNYKQLCYNINHIEQIPVPVPVY 119
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
+ +N NY + + + I I VPV +Y
Sbjct: 92 SNYNNNNYKQLCYNINYIEQIPVPVPVY 119
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
+ +N NY + + + I I VPV +Y
Sbjct: 92 SNYNNNNYKQLCYNINYIEQIPVPVPVY 119
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
+ +N NY + + + I I VPV +Y
Sbjct: 92 SNYNNNNYKQLCYNINYIEQIPVPVPVY 119
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
+ +N NY + + + I I VPV +Y
Sbjct: 92 SNYNNNNYKQLCYNINYIEQIPVPVPVY 119
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 579 NEFNIENYMYIWHIHDQIPTISVPVAIY 496
+ +N NY + + + I I VPV +Y
Sbjct: 92 SNYNNNNYKQLCYNINYIEQIPVPVPVY 119
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 187 STSSFSQGSRRPGPCSSNRPP 125
S SS + G+R G C + PP
Sbjct: 420 SPSSLADGARFGGSCLIHGPP 440
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 187 STSSFSQGSRRPGPCSSNRPP 125
S SS + G+R G C + PP
Sbjct: 420 SPSSLADGARFGGSCLIHGPP 440
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 9.2
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = -3
Query: 579 NEFNIENYMYIWH---IHDQIPTISVPVAIY 496
N +N NY +++ +QIP I VPV IY
Sbjct: 316 NYYNNNNYKKLYYNINYIEQIP-IPVPVPIY 345
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,318
Number of Sequences: 438
Number of extensions: 3230
Number of successful extensions: 25
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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