Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00038
         (530 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M17887-1|AAA36472.1|  115|Homo sapiens protein ( Human acidic ri...    83   6e-16
CR542248-1|CAG47044.1|  115|Homo sapiens RPLP2 protein.                83   6e-16
CR542212-1|CAG47008.1|  115|Homo sapiens RPLP2 protein.                83   6e-16
BC062314-1|AAH62314.1|  115|Homo sapiens ribosomal protein, larg...    83   6e-16
BC007573-1|AAH07573.1|  115|Homo sapiens ribosomal protein, larg...    83   6e-16
BC005920-1|AAH05920.1|  115|Homo sapiens ribosomal protein, larg...    83   6e-16
BC005354-1|AAH05354.1|  115|Homo sapiens ribosomal protein, larg...    83   6e-16
AB061837-1|BAB79475.1|  115|Homo sapiens ribosomal protein P2 pr...    83   6e-16
AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellu...    31   2.5  
AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ...    31   3.3  
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    31   3.3  
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro...    31   3.3  
AB051471-1|BAB21775.1|  762|Homo sapiens KIAA1684 protein protein.     31   3.3  

>M17887-1|AAA36472.1|  115|Homo sapiens protein ( Human acidic
           ribosomal phosphoprotein P2 mRNA, complete cds. ).
          Length = 115

 Score = 83.0 bits (196), Expect = 6e-16
 Identities = 37/59 (62%), Positives = 50/59 (84%)
 Frame = +3

Query: 87  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAPDV 263
           MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA  +
Sbjct: 1   MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGI 59


>CR542248-1|CAG47044.1|  115|Homo sapiens RPLP2 protein.
          Length = 115

 Score = 83.0 bits (196), Expect = 6e-16
 Identities = 37/59 (62%), Positives = 50/59 (84%)
 Frame = +3

Query: 87  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAPDV 263
           MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA  +
Sbjct: 1   MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGI 59


>CR542212-1|CAG47008.1|  115|Homo sapiens RPLP2 protein.
          Length = 115

 Score = 83.0 bits (196), Expect = 6e-16
 Identities = 37/59 (62%), Positives = 50/59 (84%)
 Frame = +3

Query: 87  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAPDV 263
           MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA  +
Sbjct: 1   MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGI 59


>BC062314-1|AAH62314.1|  115|Homo sapiens ribosomal protein, large,
           P2 protein.
          Length = 115

 Score = 83.0 bits (196), Expect = 6e-16
 Identities = 37/59 (62%), Positives = 50/59 (84%)
 Frame = +3

Query: 87  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAPDV 263
           MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA  +
Sbjct: 1   MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGI 59


>BC007573-1|AAH07573.1|  115|Homo sapiens ribosomal protein, large,
           P2 protein.
          Length = 115

 Score = 83.0 bits (196), Expect = 6e-16
 Identities = 37/59 (62%), Positives = 50/59 (84%)
 Frame = +3

Query: 87  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAPDV 263
           MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA  +
Sbjct: 1   MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGI 59


>BC005920-1|AAH05920.1|  115|Homo sapiens ribosomal protein, large,
           P2 protein.
          Length = 115

 Score = 83.0 bits (196), Expect = 6e-16
 Identities = 37/59 (62%), Positives = 50/59 (84%)
 Frame = +3

Query: 87  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAPDV 263
           MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA  +
Sbjct: 1   MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGI 59


>BC005354-1|AAH05354.1|  115|Homo sapiens ribosomal protein, large,
           P2 protein.
          Length = 115

 Score = 83.0 bits (196), Expect = 6e-16
 Identities = 37/59 (62%), Positives = 50/59 (84%)
 Frame = +3

Query: 87  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAPDV 263
           MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA  +
Sbjct: 1   MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGI 59


>AB061837-1|BAB79475.1|  115|Homo sapiens ribosomal protein P2
           protein.
          Length = 115

 Score = 83.0 bits (196), Expect = 6e-16
 Identities = 37/59 (62%), Positives = 50/59 (84%)
 Frame = +3

Query: 87  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAPDV 263
           MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA  +
Sbjct: 1   MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGI 59


>AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellular
           receptor 1 protein.
          Length = 359

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 13/51 (25%), Positives = 29/51 (56%)
 Frame = -2

Query: 262 TSGAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTAS 110
           TS  +  +T++P ++V T +S   + ++PT + + +T++       P+T S
Sbjct: 146 TSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVPTTTSIPTTTS 196


>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44709 fis, clone BRACE3019570, highly  similar
           to Rattus norvegicus SNAP-25-interacting protein (SNIP).
           ).
          Length = 1012

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 126 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLI 251
           G  TP    V+K +S    E D E+ +  +T+ + KD+ +L+
Sbjct: 765 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLL 806


>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
            marker CA125 protein.
          Length = 22152

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = -2

Query: 262  TSGAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTASKYAAT 95
            T G  S STS P  S    +   P+AS+   LR  STS         +TA  Y  T
Sbjct: 5460 TLGDTSVSTSTPNISQTNQIQTEPTASLSPRLRESSTSEKTSSTTETNTAFSYVPT 5515


>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein
            protein.
          Length = 1183

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 126  GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLI 251
            G  TP    V+K +S    E D E+ +  +T+ + KD+ +L+
Sbjct: 893  GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLL 934


>AB051471-1|BAB21775.1|  762|Homo sapiens KIAA1684 protein protein.
          Length = 762

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 126 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLI 251
           G  TP    V+K +S    E D E+ +  +T+ + KD+ +L+
Sbjct: 472 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLL 513


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,815,395
Number of Sequences: 237096
Number of extensions: 910495
Number of successful extensions: 2161
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2161
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)