Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00038
         (530 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...    82   5e-16
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...    82   5e-16
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...    82   5e-16
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...    81   7e-16
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...    81   7e-16
U81384-1|AAD00517.1|  717|Drosophila melanogaster dMyc1 protein.       31   0.98 
U77370-1|AAB39842.2|  717|Drosophila melanogaster transcription ...    31   0.98 
BT003783-1|AAO41464.1|  994|Drosophila melanogaster LP02833p pro...    31   0.98 
AY058627-1|AAL13856.1|  717|Drosophila melanogaster LD32539p pro...    31   0.98 
AL121800-1|CAD24780.1|  717|Drosophila melanogaster EG:BACN5I9.1...    31   0.98 
AE014298-519|AAF45866.2|  717|Drosophila melanogaster CG10798-PA...    31   0.98 
AE014297-1651|AAF54925.1|  988|Drosophila melanogaster CG8773-PA...    31   0.98 
M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    29   3.0  
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    29   3.0  
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    29   3.0  
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    29   3.0  

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +3

Query: 87  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLI 251
           MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLI 55



 Score = 31.1 bits (67), Expect = 0.98
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 257 GREKLSSMPVGGG 295
           GREKLSSMPVGGG
Sbjct: 58  GREKLSSMPVGGG 70


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +3

Query: 87  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLI 251
           MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLI 55



 Score = 31.1 bits (67), Expect = 0.98
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 257 GREKLSSMPVGGG 295
           GREKLSSMPVGGG
Sbjct: 58  GREKLSSMPVGGG 70


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +3

Query: 87  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLI 251
           MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLI 55



 Score = 31.1 bits (67), Expect = 0.98
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 257 GREKLSSMPVGGG 295
           GREKLSSMPVGGG
Sbjct: 58  GREKLSSMPVGGG 70


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score = 81.4 bits (192), Expect = 7e-16
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = +3

Query: 87  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLI 251
           MRYVAAYLLAVLGGK +PA  D+EKILSSVG+E D E+L KVI EL GK ++ LI
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLI 55



 Score = 31.1 bits (67), Expect = 0.98
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 257 GREKLSSMPVGGG 295
           GREKLSSMPVGGG
Sbjct: 58  GREKLSSMPVGGG 70


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score = 81.4 bits (192), Expect = 7e-16
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = +3

Query: 87  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLI 251
           MRYVAAYLLAVLGGK +PA  D+EKILSSVG+E D E+L KVI EL GK ++ LI
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLI 55



 Score = 31.1 bits (67), Expect = 0.98
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 257 GREKLSSMPVGGG 295
           GREKLSSMPVGGG
Sbjct: 58  GREKLSSMPVGGG 70


>U81384-1|AAD00517.1|  717|Drosophila melanogaster dMyc1 protein.
          Length = 717

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 13/40 (32%), Positives = 28/40 (70%)
 Frame = +3

Query: 150 DVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAPDVRS 269
           D++K+LSS  I++D EK++ + +     D+E+ + P++R+
Sbjct: 31  DMDKLLSSSTIQSDLEKIEDMESVFQDYDLEEDMKPEIRN 70


>U77370-1|AAB39842.2|  717|Drosophila melanogaster transcription
           factor dMyc/dm protein.
          Length = 717

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 13/40 (32%), Positives = 28/40 (70%)
 Frame = +3

Query: 150 DVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAPDVRS 269
           D++K+LSS  I++D EK++ + +     D+E+ + P++R+
Sbjct: 31  DMDKLLSSSTIQSDLEKIEDMESVFQDYDLEEDMKPEIRN 70


>BT003783-1|AAO41464.1|  994|Drosophila melanogaster LP02833p
           protein.
          Length = 994

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 46  LSALHVSCQLGLKKCVTWPRIYWLCWVARPRQLP 147
           ++AL  +C LGL+ C+T     +  W+A+P   P
Sbjct: 783 VTALSAACSLGLESCLTEAGEQFNAWLAKPEDRP 816


>AY058627-1|AAL13856.1|  717|Drosophila melanogaster LD32539p
           protein.
          Length = 717

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 13/40 (32%), Positives = 28/40 (70%)
 Frame = +3

Query: 150 DVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAPDVRS 269
           D++K+LSS  I++D EK++ + +     D+E+ + P++R+
Sbjct: 31  DMDKLLSSSTIQSDLEKIEDMESVFQDYDLEEDMKPEIRN 70


>AL121800-1|CAD24780.1|  717|Drosophila melanogaster
           EG:BACN5I9.1,FBgn0000472;dm protein.
          Length = 717

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 13/40 (32%), Positives = 28/40 (70%)
 Frame = +3

Query: 150 DVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAPDVRS 269
           D++K+LSS  I++D EK++ + +     D+E+ + P++R+
Sbjct: 31  DMDKLLSSSTIQSDLEKIEDMESVFQDYDLEEDMKPEIRN 70


>AE014298-519|AAF45866.2|  717|Drosophila melanogaster CG10798-PA
           protein.
          Length = 717

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 13/40 (32%), Positives = 28/40 (70%)
 Frame = +3

Query: 150 DVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAPDVRS 269
           D++K+LSS  I++D EK++ + +     D+E+ + P++R+
Sbjct: 31  DMDKLLSSSTIQSDLEKIEDMESVFQDYDLEEDMKPEIRN 70


>AE014297-1651|AAF54925.1|  988|Drosophila melanogaster CG8773-PA
           protein.
          Length = 988

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 46  LSALHVSCQLGLKKCVTWPRIYWLCWVARPRQLP 147
           ++AL  +C LGL+ C+T     +  W+A+P   P
Sbjct: 777 VTALSAACSLGLESCLTEAGEQFNAWLAKPEDRP 810


>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -1

Query: 236 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 126
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -1

Query: 236 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 126
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -1

Query: 236 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 126
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -1

Query: 236 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 126
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,185,579
Number of Sequences: 53049
Number of extensions: 289699
Number of successful extensions: 976
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)