BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00036 (399 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 87 5e-18 04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 86 8e-18 07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 47 5e-06 07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 39 0.002 01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 29 1.8 11_04_0291 - 15851647-15852252,15853995-15854136,15854666-158548... 27 4.1 07_01_0478 - 3605306-3605614,3605766-3605906 27 5.5 08_01_0839 + 8210084-8210341,8210499-8210582,8211345-8211461,821... 27 7.2 04_04_0461 + 25390552-25391904 27 7.2 03_05_0554 - 25551220-25551310,25551562-25551695,25552115-255522... 27 7.2 03_02_0170 + 6119667-6119912,6120032-6120169,6120311-6120421,612... 27 7.2 12_01_1057 - 10899871-10899961,10900255-10900411,10901420-109014... 26 9.5 06_03_1462 + 30330811-30330882,30331006-30331671 26 9.5 06_01_0115 - 901385-901495,902134-902163,902847-902927,903019-90... 26 9.5 04_04_1273 - 32307273-32307569,32307659-32307791,32307874-323081... 26 9.5 03_05_0276 + 22646416-22646760,22646858-22647090,22647184-226472... 26 9.5 03_01_0006 + 65675-65808,66385-66457,68290-68526,68648-68785,688... 26 9.5 >02_04_0116 + 19901546-19901737,19901825-19901899,19902034-19902115, 19902219-19902298,19903279-19903482,19903625-19903750, 19903872-19903985,19904802-19904918 Length = 329 Score = 87.0 bits (206), Expect = 5e-18 Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 1/74 (1%) Frame = +1 Query: 1 ETGIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFT-DKHGEVCPANWRPG 177 + GI RGLFIID + ++ TIN+L +GRSV+ET+R +QA Q+ D EVCPA W+PG Sbjct: 252 DQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETMRTLQALQYVQDNPDEVCPAGWKPG 311 Query: 178 AKTIKPDTKAAQEY 219 K++KPD K ++EY Sbjct: 312 DKSMKPDPKGSKEY 325 >04_03_0889 + 20568984-20569037,20569271-20569345,20569981-20570088, 20572066-20572179,20572393-20572509 Length = 155 Score = 86.2 bits (204), Expect = 8e-18 Identities = 39/72 (54%), Positives = 54/72 (75%), Gaps = 1/72 (1%) Frame = +1 Query: 7 GIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPANWRPGAK 183 GI RGLFIID + ++ TIN+L +GRSV+ETLR +QA Q+ ++ EVCPA W+PG K Sbjct: 80 GIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGEK 139 Query: 184 TIKPDTKAAQEY 219 ++KPD K ++EY Sbjct: 140 SMKPDPKDSKEY 151 >07_03_1427 + 26495072-26495148,26495323-26495468,26495581-26495729, 26495829-26496224 Length = 255 Score = 47.2 bits (107), Expect = 5e-06 Identities = 20/62 (32%), Positives = 33/62 (53%) Frame = +1 Query: 10 IPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTI 189 +P R L I+ + ++ + VGR+++E +R V A Q KH P NW+PG + + Sbjct: 160 LPSRALHIVGPDKKVKLSFLYPACVGRNMDEVVRAVDALQTAAKHAVATPVNWKPGERVV 219 Query: 190 KP 195 P Sbjct: 220 IP 221 >07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 Length = 220 Score = 38.7 bits (86), Expect = 0.002 Identities = 18/69 (26%), Positives = 32/69 (46%) Frame = +1 Query: 10 IPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTI 189 +P R L I+ + ++ + GR++ E LR A +H P NW+PG + + Sbjct: 125 LPNRALHIVGPDKKVKLSFLFPACTGRNMAEVLRATDALLTAARHRVATPVNWKPGERVV 184 Query: 190 KPDTKAAQE 216 P + +E Sbjct: 185 IPPGVSDEE 193 >01_06_0813 - 32165310-32165546,32165691-32165783,32166075-32166218, 32166685-32166771,32166858-32167077,32167879-32168039 Length = 313 Score = 28.7 bits (61), Expect = 1.8 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = -1 Query: 141 LVRELEGLHQPQGLLHRPPHGQVVDRDLPEVLL 43 +VRE E LHQ G P DLPE LL Sbjct: 117 MVRETEKLHQQVGRYKSPDEHPFFPEDLPEPLL 149 >11_04_0291 - 15851647-15852252,15853995-15854136,15854666-15854881, 15854957-15855052,15855147-15855259,15856516-15856727, 15856842-15856939,15857066-15857186,15857291-15857508, 15857657-15857837,15857919-15858207,15858303-15858367, 15858480-15858591 Length = 822 Score = 27.5 bits (58), Expect = 4.1 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Frame = +1 Query: 85 GRSVEETLRLVQAFQFTDKHGEV--CPAN 165 G S+EE L LV F D HGE+ C +N Sbjct: 559 GGSMEEMLNLVALFDKWDDHGEIGFCSSN 587 >07_01_0478 - 3605306-3605614,3605766-3605906 Length = 149 Score = 27.1 bits (57), Expect = 5.5 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = +3 Query: 3 DGHSLPRTLHHR 38 DGH LPRTL HR Sbjct: 7 DGHGLPRTLSHR 18 >08_01_0839 + 8210084-8210341,8210499-8210582,8211345-8211461, 8211850-8211945,8212164-8212427,8212522-8212704 Length = 333 Score = 26.6 bits (56), Expect = 7.2 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +1 Query: 136 DKHGEVCPANWRPGAKTI 189 DKHG +CP +P + T+ Sbjct: 285 DKHGHICPVTCQPVSSTV 302 >04_04_0461 + 25390552-25391904 Length = 450 Score = 26.6 bits (56), Expect = 7.2 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +1 Query: 226 DAN*TRHXTKITLFEIAYSMNTSYLYFT 309 D R+ K+TLF+ Y + YLYFT Sbjct: 354 DGKAARNLKKLTLFKQFYLVVVGYLYFT 381 >03_05_0554 - 25551220-25551310,25551562-25551695,25552115-25552221, 25552359-25552437,25552524-25552613,25552790-25553044, 25553388-25553537,25553677-25553976 Length = 401 Score = 26.6 bits (56), Expect = 7.2 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -2 Query: 218 YSWAALVSGLMVLAPGLQ 165 Y W A+ G MVL PGL+ Sbjct: 371 YRWKAIKGGTMVLGPGLR 388 >03_02_0170 + 6119667-6119912,6120032-6120169,6120311-6120421, 6120621-6120828,6120938-6121019,6121239-6121347, 6122175-6122291,6122378-6122602 Length = 411 Score = 26.6 bits (56), Expect = 7.2 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -2 Query: 218 YSWAALVSGLMVLAPG 171 YSW LVS L++ APG Sbjct: 194 YSWRVLVSRLLITAPG 209 >12_01_1057 - 10899871-10899961,10900255-10900411,10901420-10901498, 10901618-10901707,10903232-10903486,10903674-10903689, 10903907-10903940,10905653-10905884 Length = 317 Score = 26.2 bits (55), Expect = 9.5 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -2 Query: 218 YSWAALVSGLMVLAPGLQ 165 Y W + G MVL PGLQ Sbjct: 287 YRWKVIKGGKMVLCPGLQ 304 >06_03_1462 + 30330811-30330882,30331006-30331671 Length = 245 Score = 26.2 bits (55), Expect = 9.5 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +1 Query: 145 GEVCPANWRPG 177 GEV PA+WRPG Sbjct: 198 GEVLPADWRPG 208 >06_01_0115 - 901385-901495,902134-902163,902847-902927,903019-903084, 903207-903284,904708-904791,904881-904970,905069-905345, 905765-905973 Length = 341 Score = 26.2 bits (55), Expect = 9.5 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = +1 Query: 25 LFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTI 189 + +ID + +I N V SVEE + +Q + T K G + A GA T+ Sbjct: 263 VLVIDQGTIIDRIDYNIQNVAASVEEGYKQLQKAERTQKKGGMVSACMHGGAVTL 317 >04_04_1273 - 32307273-32307569,32307659-32307791,32307874-32308105, 32308220-32308436,32308594-32308718,32309416-32310757 Length = 781 Score = 26.2 bits (55), Expect = 9.5 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -1 Query: 99 LHRPPHGQVVDRDLPEVLLVVDDE 28 LH P G V+ RDL +++DDE Sbjct: 589 LHEGPDGSVIHRDLKLSNILLDDE 612 >03_05_0276 + 22646416-22646760,22646858-22647090,22647184-22647259, 22647383-22647459,22647559-22647592,22647699-22647848, 22647935-22648069,22648156-22648227 Length = 373 Score = 26.2 bits (55), Expect = 9.5 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = -1 Query: 57 PEVLLVVDDEESSEGNARL 1 P V++VVDD+E EG+ +L Sbjct: 81 PAVVVVVDDDEEGEGDPQL 99 >03_01_0006 + 65675-65808,66385-66457,68290-68526,68648-68785, 68871-69005,69131-69310,69495-69701,69821-69943, 70240-70359,70758-70880,72067-72171,72254-72398, 73443-73607,73669-73907,74452-74484,74977-75058, 75200-75360,75739-75951,76789-76971,77051-77220, 77375-77474 Length = 1021 Score = 26.2 bits (55), Expect = 9.5 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 372 KDHSSLLQPLDYIKLINTDLTSEVQIRSIH 283 K+H + + LD++K LTSEV + IH Sbjct: 69 KEHIPVEEVLDHLKCTREGLTSEVAQQRIH 98 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,720,291 Number of Sequences: 37544 Number of extensions: 146370 Number of successful extensions: 476 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 468 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 474 length of database: 14,793,348 effective HSP length: 75 effective length of database: 11,977,548 effective search space used: 682720236 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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