Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00035
(761 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 32 0.006
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 32 0.006
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 32 0.006
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 28 0.071
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 28 0.071
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 24 1.5
DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 23 2.7
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 2.7
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 23 2.7
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 23 2.7
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 22 4.6
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 22 4.6
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 22 6.1
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 21 8.1
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 31.9 bits (69), Expect = 0.006
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 29 LEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKL 85
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 31.9 bits (69), Expect = 0.006
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 29 LEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKL 85
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 31.9 bits (69), Expect = 0.006
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 29 LEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKL 85
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 28.3 bits (60), Expect = 0.071
Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + L T + + W D ++ WN ++ G ++++ ++
Sbjct: 29 LEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLKWNESEYGGVKDLRITPNKL 85
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 28.3 bits (60), Expect = 0.071
Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + L T + + W D ++ WN ++ G ++++ ++
Sbjct: 29 LEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLKWNESEYGGVKDLRITPNKL 85
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 384 DVDPLSVKYFSFAAWNGVEAKFLYDCP 464
D P++ +Y W +K YDCP
Sbjct: 51 DSVPMTCRYTFLLEWYHTLSKACYDCP 77
>DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc
growth factor 2 protein.
Length = 439
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 421 AKLKYFTDNGSTSLKLIKG 365
A++KY+ NG+ S K++ G
Sbjct: 278 AQVKYWMSNGAPSAKIVLG 296
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 23.0 bits (47), Expect = 2.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 88 PHSVFEMHIAIQAASNGH 141
P S MH+A AA NGH
Sbjct: 110 PDSPSSMHMANTAAPNGH 127
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -3
Query: 621 VSLNPSFTSMTGLGGTEGSRPINKVR 544
+SL+P+ TSM + + ++P+ ++R
Sbjct: 256 LSLHPAETSMNDVNRNDCAKPLTQIR 281
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 23.0 bits (47), Expect = 2.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 88 PHSVFEMHIAIQAASNGH 141
P S MH+A AA NGH
Sbjct: 112 PDSPSSMHMANTAAPNGH 129
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -3
Query: 621 VSLNPSFTSMTGLGGTEGSRPINKVR 544
+SL+P+ TSM + ++P+ ++R
Sbjct: 256 LSLHPAETSMNDANRNDCAKPLTQIR 281
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -3
Query: 621 VSLNPSFTSMTGLGGTEGSRPINKVR 544
+SL+P+ TSM + ++P+ ++R
Sbjct: 256 LSLHPAETSMNDANRNDCAKPLTQIR 281
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +2
Query: 197 WSAVEGTSSPNYAATCD 247
W +V G ++P YA++ D
Sbjct: 217 WESVTGQNAPLYASSID 233
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 21.4 bits (43), Expect = 8.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -3
Query: 657 VNLESKVLYRKLVSLNPSFTSMTGLGGTEGSRPINKVRFN 538
VN+ L +V+ + F TGLGG + + ++ + FN
Sbjct: 195 VNMSHNKLINLVVAPSVPFEQDTGLGGLQNIKVLD-LSFN 233
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,298
Number of Sequences: 336
Number of extensions: 4232
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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