Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00035
(761 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069859-1|AAL40004.1| 313|Drosophila melanogaster SD10415p pro... 46 4e-05
AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA... 46 4e-05
AY061622-1|AAL29170.1| 327|Drosophila melanogaster SD09326p pro... 40 0.004
AY122199-1|AAM52711.1| 308|Drosophila melanogaster LD46156p pro... 38 0.020
AE013599-3120|AAF46666.1| 296|Drosophila melanogaster CG10527-P... 38 0.020
AY005148-1|AAF89090.1| 441|Drosophila melanogaster nicotinic ac... 37 0.035
AJ318761-1|CAC48166.1| 441|Drosophila melanogaster nicotinic ac... 37 0.035
AE014134-121|AAN10500.1| 327|Drosophila melanogaster CG11822-PB... 37 0.035
AE014134-120|AAF51485.1| 441|Drosophila melanogaster CG11822-PA... 37 0.035
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 36 0.080
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 36 0.080
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 36 0.080
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 36 0.080
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 36 0.080
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 34 0.18
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 34 0.18
AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein. 33 0.56
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 31 1.3
AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic ac... 31 1.3
AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE... 31 1.3
AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA... 31 1.3
X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta su... 31 1.7
AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p pro... 31 1.7
AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB... 31 1.7
AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA... 31 1.7
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 30 3.0
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 30 3.0
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 30 3.0
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 30 3.0
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 30 3.0
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 30 3.0
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 29 6.9
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 29 6.9
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 29 6.9
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 29 6.9
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 29 6.9
>AY069859-1|AAL40004.1| 313|Drosophila melanogaster SD10415p
protein.
Length = 313
Score = 46.4 bits (105), Expect = 4e-05
Identities = 24/67 (35%), Positives = 35/67 (52%)
Frame = +1
Query: 25 GYSYETFYRVDANEMRSINVDPHSVFEMHIAIQAASNGHIVLSEIPNPGVSDPVYEIVVG 204
GY Y FY + E+ + N + + A + HI+LS +P +D VYEIV+G
Sbjct: 53 GYGYRRFYML--RELSNNNRKAGERLHLKFYVLTAMDAHILLSVTNHPRPNDRVYEIVIG 110
Query: 205 GGGNKFT 225
GGN F+
Sbjct: 111 AGGNTFS 117
Score = 35.5 bits (78), Expect = 0.080
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 366 PLISFNDVDPLSVKYFSFAAWNGVEAKFLYDCPIPG 473
PL+ F D PL + Y SF+++ A++ YDC G
Sbjct: 166 PLLQFIDEAPLVINYLSFSSFGSNTARWFYDCGFDG 201
Score = 32.7 bits (71), Expect = 0.56
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 572 SVPPNPVMEVKLGFKLTSFRYNTLDSKLTTTAAVVVSWEDDSMAWNPDKF 721
S+P N + + F+ S Y S L T +++ W D + W P+ F
Sbjct: 231 SMPAN-LSSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDF 279
>AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA
protein.
Length = 585
Score = 46.4 bits (105), Expect = 4e-05
Identities = 24/67 (35%), Positives = 35/67 (52%)
Frame = +1
Query: 25 GYSYETFYRVDANEMRSINVDPHSVFEMHIAIQAASNGHIVLSEIPNPGVSDPVYEIVVG 204
GY Y FY + E+ + N + + A + HI+LS +P +D VYEIV+G
Sbjct: 53 GYGYRRFYML--RELSNNNRKAGERLHLKFYVLTAMDAHILLSVTNHPRPNDRVYEIVIG 110
Query: 205 GGGNKFT 225
GGN F+
Sbjct: 111 AGGNTFS 117
Score = 35.5 bits (78), Expect = 0.080
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 366 PLISFNDVDPLSVKYFSFAAWNGVEAKFLYDCPIPG 473
PL+ F D PL + Y SF+++ A++ YDC G
Sbjct: 166 PLLQFIDEAPLVINYLSFSSFGSNTARWFYDCGFDG 201
Score = 32.7 bits (71), Expect = 0.56
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 572 SVPPNPVMEVKLGFKLTSFRYNTLDSKLTTTAAVVVSWEDDSMAWNPDKF 721
S+P N + + F+ S Y S L T +++ W D + W P+ F
Sbjct: 231 SMPAN-LSSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDF 279
>AY061622-1|AAL29170.1| 327|Drosophila melanogaster SD09326p
protein.
Length = 327
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
V LG +T + L+ KLTT + + W D+ W P +++ T I L+ ++
Sbjct: 77 VSLGMVVTYIDIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEV 130
>AY122199-1|AAM52711.1| 308|Drosophila melanogaster LD46156p
protein.
Length = 308
Score = 37.5 bits (83), Expect = 0.020
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +3
Query: 258 SSVTTPQILSPIELRGFYIKISEDGLVEFGREGQVLPLISFNDVDPLSVKYFSFAAWNGV 437
+ V TP IL E RGF+++ D ++ GREG +S++ V + G
Sbjct: 84 AEVPTPGILDAGEFRGFWVRWY-DNVITVGREGDAAAFLSYDAGSLFPVNFVGICTGWGA 142
Query: 438 EAKFLYDCPIP 470
+L D P P
Sbjct: 143 SGTWLIDEPAP 153
>AE013599-3120|AAF46666.1| 296|Drosophila melanogaster CG10527-PA
protein.
Length = 296
Score = 37.5 bits (83), Expect = 0.020
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +3
Query: 258 SSVTTPQILSPIELRGFYIKISEDGLVEFGREGQVLPLISFNDVDPLSVKYFSFAAWNGV 437
+ V TP IL E RGF+++ D ++ GREG +S++ V + G
Sbjct: 72 AEVPTPGILDAGEFRGFWVRWY-DNVITVGREGDAAAFLSYDAGSLFPVNFVGICTGWGA 130
Query: 438 EAKFLYDCPIP 470
+L D P P
Sbjct: 131 SGTWLIDEPAP 141
>AY005148-1|AAF89090.1| 441|Drosophila melanogaster nicotinic
acetylcholine receptorbeta subunit protein.
Length = 441
Score = 36.7 bits (81), Expect = 0.035
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
V L +T + L+ KLTT + + W D+ W P +++ T I L+ ++
Sbjct: 77 VSLEMVVTYIDIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEV 130
>AJ318761-1|CAC48166.1| 441|Drosophila melanogaster nicotinic
acetylcholine receptorbeta 3 (Dbeta3) subunit protein.
Length = 441
Score = 36.7 bits (81), Expect = 0.035
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
V L +T + L+ KLTT + + W D+ W P +++ T I L+ ++
Sbjct: 77 VSLEMVVTYIDIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEV 130
>AE014134-121|AAN10500.1| 327|Drosophila melanogaster CG11822-PB,
isoform B protein.
Length = 327
Score = 36.7 bits (81), Expect = 0.035
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
V L +T + L+ KLTT + + W D+ W P +++ T I L+ ++
Sbjct: 77 VSLEMVVTYIDIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEV 130
>AE014134-120|AAF51485.1| 441|Drosophila melanogaster CG11822-PA,
isoform A protein.
Length = 441
Score = 36.7 bits (81), Expect = 0.035
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
V L +T + L+ KLTT + + W D+ W P +++ T I L+ ++
Sbjct: 77 VSLEMVVTYIDIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEV 130
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 35.5 bits (78), Expect = 0.080
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 599 VKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
VKLG +L+ N D LTT + W+D W+P ++ G T +
Sbjct: 72 VKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTEL 119
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 35.5 bits (78), Expect = 0.080
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 599 VKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
VKLG +L+ N D LTT + W+D W+P ++ G T +
Sbjct: 72 VKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTEL 119
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 35.5 bits (78), Expect = 0.080
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 599 VKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
VKLG +L+ N D LTT + W+D W+P ++ G T +
Sbjct: 72 VKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTEL 119
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 35.5 bits (78), Expect = 0.080
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 599 VKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
VKLG +L+ N D LTT + W+D W+P ++ G T +
Sbjct: 72 VKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTEL 119
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 35.5 bits (78), Expect = 0.080
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 599 VKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
VKLG +L+ N D LTT + W+D W+P ++ G T +
Sbjct: 72 VKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTEL 119
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
+ VK+G +L+ N + +TT V W D + WNPD + G +
Sbjct: 50 LTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTL 99
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
+ VK+G +L+ N + +TT V W D + WNPD + G +
Sbjct: 50 LTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTL 99
>AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.56
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 572 SVPPNPVMEVKLGFKLTSFRYNTLDSKLTTTAAVVVSWEDDSMAWNPDKF 721
S+P N + + F+ S Y S L T +++ W D + W P+ F
Sbjct: 34 SMPAN-LSSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDF 82
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 55 LEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKL 111
>AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type I
protein.
Length = 494
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 55 LEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKL 111
>AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE,
isoform E protein.
Length = 523
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 55 LEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKL 111
>AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA,
isoform A protein.
Length = 494
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 55 LEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKL 111
>X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta
subunit of nicotinicacetylcholine receptor protein.
Length = 500
Score = 31.1 bits (67), Expect = 1.7
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 569 PSVPPNPVMEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
P V + V LG KL+ N + +TT V W D + W+P+++ G +
Sbjct: 28 PVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQL 85
>AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p
protein.
Length = 238
Score = 31.1 bits (67), Expect = 1.7
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 569 PSVPPNPVMEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
P V + V LG KL+ N + +TT V W D + W+P+++ G +
Sbjct: 47 PVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQL 104
>AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB,
isoform B protein.
Length = 304
Score = 31.1 bits (67), Expect = 1.7
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 569 PSVPPNPVMEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
P V + V LG KL+ N + +TT V W D + W+P+++ G +
Sbjct: 47 PVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQL 104
>AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA,
isoform A protein.
Length = 519
Score = 31.1 bits (67), Expect = 1.7
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 569 PSVPPNPVMEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
P V + V LG KL+ N + +TT V W D + W+P+++ G +
Sbjct: 47 PVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQL 104
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSK---LTTTAAVVVSWEDDSMAWNPDKFNGTTNIKL 745
++L F LT + +D K L T + + W D ++ WN +F G ++++
Sbjct: 86 LQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNLRWNSSEFGGVRDLRI 137
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSK---LTTTAAVVVSWEDDSMAWNPDKFNGTTNIKL 745
++L F LT + +D K L T + + W D ++ WN +F G ++++
Sbjct: 86 LQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNLRWNSSEFGGVRDLRI 137
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSK---LTTTAAVVVSWEDDSMAWNPDKFNGTTNIKL 745
++L F LT + +D K L T + + W D ++ WN +F G ++++
Sbjct: 64 LQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNLRWNSSEFGGVRDLRI 115
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSK---LTTTAAVVVSWEDDSMAWNPDKFNGTTNIKL 745
++L F LT + +D K L T + + W D ++ WN +F G ++++
Sbjct: 86 LQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNLRWNSSEFGGVRDLRI 137
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSK---LTTTAAVVVSWEDDSMAWNPDKFNGTTNIKL 745
++L F LT + +D K L T + + W D ++ WN +F G ++++
Sbjct: 86 LQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNLRWNSSEFGGVRDLRI 137
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSK---LTTTAAVVVSWEDDSMAWNPDKFNGTTNIKL 745
++L F LT + +D K L T + + W D ++ WN +F G ++++
Sbjct: 67 LQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNLRWNSSEFGGVRDLRI 118
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSK---LTTTAAVVVSWEDDSMAWNPDKFNGTTNIKL 745
++L F LT + +D K L T + + W D ++ WN + G ++++
Sbjct: 338 LQLSFGLTLMQIIDVDEKNQLLVTNVWLKLEWNDMNLRWNTSDYGGVKDLRI 389
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 29.1 bits (62), Expect = 6.9
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 569 PSVPPNPVMEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNG 727
P V V++V + KL+ N + +TT V SW D + W P ++ G
Sbjct: 58 PVVNTTDVLKVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGG 111
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSK---LTTTAAVVVSWEDDSMAWNPDKFNGTTNIKL 745
++L F LT + +D K L T + + W D ++ WN + G ++++
Sbjct: 337 LQLSFGLTLMQIIDVDEKNQLLVTNVWLKLEWNDMNLRWNTSDYGGVKDLRI 388
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSK---LTTTAAVVVSWEDDSMAWNPDKFNGTTNIKL 745
++L F LT + +D K L T + + W D ++ WN + G ++++
Sbjct: 338 LQLSFGLTLMQIIDVDEKNQLLVTNVWLKLEWNDMNLRWNTSDYGGVKDLRI 389
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSK---LTTTAAVVVSWEDDSMAWNPDKFNGTTNIKL 745
++L F LT + +D K L T + + W D ++ WN + G ++++
Sbjct: 338 LQLSFGLTLMQIIDVDEKNQLLVTNVWLKLEWNDMNLRWNTSDYGGVKDLRI 389
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,582,745
Number of Sequences: 53049
Number of extensions: 804051
Number of successful extensions: 2581
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2581
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -