Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00035
(761 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 36 3e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 35 0.001
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 34 0.001
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.009
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.009
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.009
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.009
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.009
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.009
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 31 0.009
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 31 0.009
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 30 0.027
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 29 0.047
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 29 0.047
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 28 0.082
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 27 0.19
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 27 0.19
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 26 0.44
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 23 4.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 5.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 5.4
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 7.1
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 7.1
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 9.4
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 36.3 bits (80), Expect = 3e-04
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 584 NPVMEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
N + VKLG +L+ N D LTT + W+D W+P ++ G T +
Sbjct: 43 NDTVVVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFQWDPAEYGGVTEL 95
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 34.7 bits (76), Expect = 0.001
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 569 PSVPPNPVMEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNG 727
P + + V+LG KL+ N + +TT V W D + WNP+++ G
Sbjct: 51 PVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLKWNPEEYGG 104
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 34.3 bits (75), Expect = 0.001
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
+ VK+G +L+ N + +TT V W D + WNPD + G +
Sbjct: 46 LTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTL 95
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.009
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 12 LEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKL 68
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.009
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 12 LEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKL 68
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.009
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 12 LEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKL 68
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.009
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 12 LEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKL 68
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.009
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 12 LEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKL 68
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.009
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 12 LEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKL 68
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 31.5 bits (68), Expect = 0.009
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 80 LEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKL 136
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 31.5 bits (68), Expect = 0.009
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 80 LEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKL 136
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 29.9 bits (64), Expect = 0.027
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 569 PSVPPNPVMEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNG 727
P V + VK+ KL+ N + +TT V SW D + W+P ++ G
Sbjct: 42 PVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLKWDPKEYGG 95
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 29.1 bits (62), Expect = 0.047
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 569 PSVPPNPVMEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNG 727
P V + V+ V + KL+ N + +TT V SW D + W P ++ G
Sbjct: 46 PVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGG 99
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 29.1 bits (62), Expect = 0.047
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 569 PSVPPNPVMEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNG 727
P V + V+ V + KL+ N + +TT V SW D + W P ++ G
Sbjct: 46 PVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGG 99
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 28.3 bits (60), Expect = 0.082
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +2
Query: 605 LGFKLTSFRYNTLDSK---LTTTAAVVVSWEDDSMAWNPDKFNGTTNIKL 745
L F LT + +D K L T + + W D +M WN + G ++++
Sbjct: 51 LSFGLTLMQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRI 100
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 27.1 bits (57), Expect = 0.19
Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 581 PNPVMEVKLGFKLTSFRYNTLDSKLTTTAAVVVS--WEDDSMAWNPDKFNGTTNIKLRQG 754
P K+ F L+ YN + T V++ WE + W +F+ +I+++
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSY 113
Query: 755 QI 760
+I
Sbjct: 114 EI 115
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.19
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +2
Query: 539 LKRTLLMGRLPSVPP--NPVMEVKLGFKLTSFRYNTLDSK---LTTTAAVVVSWEDDSMA 703
L + LL G V P N + + F L+ +D K LTT V W D +
Sbjct: 9 LTKYLLDGYDAGVRPAENSSQPLAVVFGLSLHHIIDVDEKNQILTTNCWVTQIWTDHHLK 68
Query: 704 WNPDKFNGTTNIKLRQGQI 760
WN +F G I++ ++
Sbjct: 69 WNASEFAGIRVIRVPYNRV 87
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 25.8 bits (54), Expect = 0.44
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 671 VVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+ + W D ++W P F+G I ++ I
Sbjct: 95 MTLMWTDSHLSWKPSDFDGINYIYVKSDDI 124
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 244 AGCGVVR*TCSLHRRP 197
AGC VV T LHR+P
Sbjct: 436 AGCTVVIGTFKLHRQP 451
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 94 NEGQR*CSSFRSRPPGRKFRSCNRVY 17
N+G+R CS RSR +K R ++++
Sbjct: 247 NDGERSCSRDRSREYKKKDRRYDQLH 272
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 94 NEGQR*CSSFRSRPPGRKFRSCNRVY 17
N+G+R CS RSR +K R ++++
Sbjct: 247 NDGERSCSRDRSREYKKKDRRYDQLH 272
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 94 NEGQR*CSSFRSRPPGRKFRSCNRVY 17
N+G+R CS RSR +K R ++++
Sbjct: 247 NDGERSCSRDRSREYKKKDRRYDQLH 272
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 94 NEGQR*CSSFRSRPPGRKFRSCNRVY 17
N+G+R CS RSR +K R ++++
Sbjct: 247 NDGERSCSRDRSREYKKKDRRYDQLH 272
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 94 NEGQR*CSSFRSRPPGRKFRSCNRVY 17
N+G+R CS RSR +K R ++++
Sbjct: 247 NDGERSCSRDRSREYKKKDRRYDQLH 272
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 94 NEGQR*CSSFRSRPPGRKFRSCNRVY 17
N+G+R CS RSR +K R ++++
Sbjct: 247 NDGERSCSRDRSREYKKKDRRYDQLH 272
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 94 NEGQR*CSSFRSRPPGRKFRSCNRVY 17
N+G+R CS RSR +K R ++++
Sbjct: 247 NDGERSCSRDRSREYKKKDRRYDQLH 272
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 564 GFPLSRPIPSW 596
GFPL RP+ +W
Sbjct: 651 GFPLDRPMWAW 661
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 564 GFPLSRPIPSW 596
GFPL RP+ +W
Sbjct: 651 GFPLDRPMWAW 661
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 303 GFYIKISEDGLVEFGREGQVLPLIS 377
G + + E+G VE R+G+ L ++
Sbjct: 136 GSIVYVMEEGKVEVSRDGKYLSTLA 160
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3
Query: 699 WRGIRTNSTEPP 734
W G+R + EPP
Sbjct: 631 WEGLRARTLEPP 642
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,605
Number of Sequences: 438
Number of extensions: 4967
Number of successful extensions: 33
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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