Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00034
         (396 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14970-1|AAA85658.1|  204|Homo sapiens ribosomal protein S5 prot...   173   1e-43
BC018151-1|AAH18151.1|  204|Homo sapiens ribosomal protein S5 pr...   173   1e-43
BC015405-1|AAH15405.1|  204|Homo sapiens ribosomal protein S5 pr...   173   1e-43
AK223106-1|BAD96826.1|  204|Homo sapiens ribosomal protein S5 va...   173   1e-43
AB061853-1|BAB79493.1|  204|Homo sapiens ribosomal protein S5 pr...   173   1e-43
AB007149-1|BAA25815.1|   55|Homo sapiens ribosomal protein S5 pr...    62   6e-10
AB209803-1|BAD93040.1|  107|Homo sapiens ribosomal protein S5 va...    35   0.11 
BC095477-1|AAH95477.1|  522|Homo sapiens AMIGO2 protein protein.       33   0.34 
BC047595-1|AAH47595.1|  522|Homo sapiens adhesion molecule with ...    33   0.34 
BC014103-1|AAH14103.2|  277|Homo sapiens AMIGO2 protein protein.       33   0.34 
AY454159-1|AAR83271.1|  522|Homo sapiens DEGA/AMIGO-2 precursor ...    33   0.34 
AY237005-1|AAO48946.1|  522|Homo sapiens transmembrane protein A...    33   0.34 
AB080610-1|BAC81189.1|  522|Homo sapiens alivin 1 protein.             33   0.34 
AB079074-1|BAC81188.1|  283|Homo sapiens alivin 1 protein.             33   0.34 
AK127866-1|BAC87168.1|  204|Homo sapiens protein ( Homo sapiens ...    30   3.2  
AK094875-1|BAC04446.1|  149|Homo sapiens protein ( Homo sapiens ...    29   7.4  
BC020198-1|AAH20198.1|  567|Homo sapiens MEGF10 protein protein.       28   9.7  
AB058676-1|BAB47409.1| 1140|Homo sapiens MEGF10 protein (KIAA178...    28   9.7  

>U14970-1|AAA85658.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  173 bits (422), Expect = 1e-43
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = +1

Query: 1   VKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 180
           VKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW
Sbjct: 93  VKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 152

Query: 181 LLCTGAREAAFRNIKTIAECVADELL 258
           LLCTGAREAAFRNIKTIAEC+ADEL+
Sbjct: 153 LLCTGAREAAFRNIKTIAECLADELI 178



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 252 IINAAKGLSNSNAIKKKDELERVAKSNR 335
           +INAAKG SNS AIKKKDELERVAKSNR
Sbjct: 177 LINAAKGSSNSYAIKKKDELERVAKSNR 204


>BC018151-1|AAH18151.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  173 bits (422), Expect = 1e-43
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = +1

Query: 1   VKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 180
           VKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW
Sbjct: 93  VKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 152

Query: 181 LLCTGAREAAFRNIKTIAECVADELL 258
           LLCTGAREAAFRNIKTIAEC+ADEL+
Sbjct: 153 LLCTGAREAAFRNIKTIAECLADELI 178



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 252 IINAAKGLSNSNAIKKKDELERVAKSNR 335
           +INAAKG SNS AIKKKDELERVAKSNR
Sbjct: 177 LINAAKGSSNSYAIKKKDELERVAKSNR 204


>BC015405-1|AAH15405.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  173 bits (422), Expect = 1e-43
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = +1

Query: 1   VKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 180
           VKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW
Sbjct: 93  VKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 152

Query: 181 LLCTGAREAAFRNIKTIAECVADELL 258
           LLCTGAREAAFRNIKTIAEC+ADEL+
Sbjct: 153 LLCTGAREAAFRNIKTIAECLADELI 178



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 252 IINAAKGLSNSNAIKKKDELERVAKSNR 335
           +INAAKG SNS AIKKKDELERVAKSNR
Sbjct: 177 LINAAKGSSNSYAIKKKDELERVAKSNR 204


>AK223106-1|BAD96826.1|  204|Homo sapiens ribosomal protein S5
           variant protein.
          Length = 204

 Score =  173 bits (422), Expect = 1e-43
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = +1

Query: 1   VKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 180
           VKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW
Sbjct: 93  VKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 152

Query: 181 LLCTGAREAAFRNIKTIAECVADELL 258
           LLCTGAREAAFRNIKTIAEC+ADEL+
Sbjct: 153 LLCTGAREAAFRNIKTIAECLADELI 178



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +3

Query: 252 IINAAKGLSNSNAIKKKDELERVAKSNR 335
           +INAAKG SN  AIKK+DELERVAKSNR
Sbjct: 177 LINAAKGSSNFYAIKKRDELERVAKSNR 204


>AB061853-1|BAB79493.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  173 bits (422), Expect = 1e-43
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = +1

Query: 1   VKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 180
           VKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW
Sbjct: 93  VKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 152

Query: 181 LLCTGAREAAFRNIKTIAECVADELL 258
           LLCTGAREAAFRNIKTIAEC+ADEL+
Sbjct: 153 LLCTGAREAAFRNIKTIAECLADELI 178



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 252 IINAAKGLSNSNAIKKKDELERVAKSNR 335
           +INAAKG SNS AIKKKDELERVAKSNR
Sbjct: 177 LINAAKGSSNSYAIKKKDELERVAKSNR 204


>AB007149-1|BAA25815.1|   55|Homo sapiens ribosomal protein S5
           protein.
          Length = 55

 Score = 62.1 bits (144), Expect = 6e-10
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +1

Query: 172 AIWLLCTGAREAAFRNIKTIAECVADELL 258
           AIWLLCTGAREAAFRNIKTIAEC+ADEL+
Sbjct: 1   AIWLLCTGAREAAFRNIKTIAECLADELI 29



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 252 IINAAKGLSNSNAIKKKDELERVAKSNR 335
           +INAAKG SNS AIKKKDELERVAKSNR
Sbjct: 28  LINAAKGSSNSYAIKKKDELERVAKSNR 55


>AB209803-1|BAD93040.1|  107|Homo sapiens ribosomal protein S5
          variant protein.
          Length = 107

 Score = 34.7 bits (76), Expect = 0.11
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = +1

Query: 1  VKHAFEIIHLLTGENPLQVLVTA 69
          VKHAFEIIHLLTGE  L  LV A
Sbjct: 30 VKHAFEIIHLLTGEVGLCGLVRA 52


>BC095477-1|AAH95477.1|  522|Homo sapiens AMIGO2 protein protein.
          Length = 522

 Score = 33.1 bits (72), Expect = 0.34
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +1

Query: 196 AREAAFRNIKTIAECVADELLMQLRVYLTPTPSKRRT 306
           A EA      T+A CVA  +L+ L +YLTP P K +T
Sbjct: 392 AHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKT 428


>BC047595-1|AAH47595.1|  522|Homo sapiens adhesion molecule with
           Ig-like domain 2 protein.
          Length = 522

 Score = 33.1 bits (72), Expect = 0.34
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +1

Query: 196 AREAAFRNIKTIAECVADELLMQLRVYLTPTPSKRRT 306
           A EA      T+A CVA  +L+ L +YLTP P K +T
Sbjct: 392 AHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKT 428


>BC014103-1|AAH14103.2|  277|Homo sapiens AMIGO2 protein protein.
          Length = 277

 Score = 33.1 bits (72), Expect = 0.34
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +1

Query: 196 AREAAFRNIKTIAECVADELLMQLRVYLTPTPSKRRT 306
           A EA      T+A CVA  +L+ L +YLTP P K +T
Sbjct: 147 AHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKT 183


>AY454159-1|AAR83271.1|  522|Homo sapiens DEGA/AMIGO-2 precursor
           protein.
          Length = 522

 Score = 33.1 bits (72), Expect = 0.34
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +1

Query: 196 AREAAFRNIKTIAECVADELLMQLRVYLTPTPSKRRT 306
           A EA      T+A CVA  +L+ L +YLTP P K +T
Sbjct: 392 AHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKT 428


>AY237005-1|AAO48946.1|  522|Homo sapiens transmembrane protein
           AMIGO2 protein.
          Length = 522

 Score = 33.1 bits (72), Expect = 0.34
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +1

Query: 196 AREAAFRNIKTIAECVADELLMQLRVYLTPTPSKRRT 306
           A EA      T+A CVA  +L+ L +YLTP P K +T
Sbjct: 392 AHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKT 428


>AB080610-1|BAC81189.1|  522|Homo sapiens alivin 1 protein.
          Length = 522

 Score = 33.1 bits (72), Expect = 0.34
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +1

Query: 196 AREAAFRNIKTIAECVADELLMQLRVYLTPTPSKRRT 306
           A EA      T+A CVA  +L+ L +YLTP P K +T
Sbjct: 392 AHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKT 428


>AB079074-1|BAC81188.1|  283|Homo sapiens alivin 1 protein.
          Length = 283

 Score = 33.1 bits (72), Expect = 0.34
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +1

Query: 196 AREAAFRNIKTIAECVADELLMQLRVYLTPTPSKRRT 306
           A EA      T+A CVA  +L+ L +YLTP P K +T
Sbjct: 153 AHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKT 189


>AK127866-1|BAC87168.1|  204|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45969 fis, clone PLACE7016454. ).
          Length = 204

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 237 LCDCFNISECSLTCTCAQKPDCLVDSAQG*NINGL 133
           LC C ++  C+  C C  K  C   S Q  ++NG+
Sbjct: 45  LCVCVHVCICACICACVWKFPCRNHSVQTESLNGV 79


>AK094875-1|BAC04446.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37556 fis, clone BRCAN2028545. ).
          Length = 149

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -1

Query: 252 FICNTLCDCFNISECSLTCTCAQKPDCLV 166
           ++C  +C C  +  C   C CA    C+V
Sbjct: 106 YVCKRVCTCACVCMCVQVCMCASVHMCIV 134


>BC020198-1|AAH20198.1|  567|Homo sapiens MEGF10 protein protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
 Frame = -1

Query: 252 FICNTLCDCFNISECSL---TCTCA 187
           F CN  C C N   C+    TCTCA
Sbjct: 493 FGCNLTCQCLNGGACNTLDGTCTCA 517


>AB058676-1|BAB47409.1| 1140|Homo sapiens MEGF10 protein (KIAA1780)
           protein.
          Length = 1140

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
 Frame = -1

Query: 252 FICNTLCDCFNISECSL---TCTCA 187
           F CN  C C N   C+    TCTCA
Sbjct: 493 FGCNLTCQCLNGGACNTLDGTCTCA 517


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,399,926
Number of Sequences: 237096
Number of extensions: 960727
Number of successful extensions: 2080
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2072
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)