Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00032
         (399 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   0.84 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   0.84 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   1.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   2.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   4.5  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 0.84
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 201 VSSRTGPFTFLMI*RLVS 148
           +S RTG FTFLM+  ++S
Sbjct: 73  LSFRTGSFTFLMVVAVLS 90


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 0.84
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 201 VSSRTGPFTFLMI*RLVS 148
           +S RTG FTFLM+  ++S
Sbjct: 73  LSFRTGSFTFLMVVAVLS 90


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 297 YINLCVKLTKPSKMT 341
           Y  +CVKL  P K+T
Sbjct: 330 YPEVCVKLANPQKLT 344


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 2   SFGARVLIALSSILQAKMDKPNV 70
           ++GA +L A   +L A  DKP +
Sbjct: 417 AYGAGLLSAYGELLHALSDKPEL 439


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 252 YAALLH*VKAFTCTIYINLCVKLT 323
           YA+LL   K F   IY NL +  T
Sbjct: 72  YASLLCTEKIFLFAIYTNLSILTT 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,171
Number of Sequences: 336
Number of extensions: 1646
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)