Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00032
(399 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58682-1|AAB07066.1| 69|Homo sapiens ribosomal protein S28 pro... 78 1e-14
L05091-1|AAC15855.1| 69|Homo sapiens ribosomal protein S28 pro... 78 1e-14
CR457055-1|CAG33336.1| 69|Homo sapiens RPS28 protein. 78 1e-14
BC070218-1|AAH70218.1| 69|Homo sapiens ribosomal protein S28 p... 78 1e-14
BC070217-1|AAH70217.1| 69|Homo sapiens ribosomal protein S28 p... 78 1e-14
BC021239-1|AAH21239.1| 69|Homo sapiens ribosomal protein S28 p... 78 1e-14
BC000354-1|AAH00354.1| 69|Homo sapiens ribosomal protein S28 p... 78 1e-14
AB061846-1|BAB79484.1| 69|Homo sapiens ribosomal protein S28 p... 78 1e-14
AL023513-1|CAI19979.1| 57|Homo sapiens protein ( Human DNA seq... 43 4e-04
BX641077-1|CAE46038.1| 615|Homo sapiens hypothetical protein pr... 29 5.7
BC032456-1|AAH32456.1| 412|Homo sapiens ZCCHC6 protein protein. 29 5.7
AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domai... 29 5.7
AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domai... 29 5.7
AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domai... 29 5.7
AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domai... 29 5.7
AK055546-1|BAB70951.1| 750|Homo sapiens protein ( Homo sapiens ... 29 5.7
AF121255-1|AAF13034.2| 377|Homo sapiens protein translation ini... 29 5.7
Y11151-1|CAA72037.1| 118|Homo sapiens phenylpyruvate tautomeras... 29 7.5
U84143-1|AAB41503.1| 118|Homo sapiens D-dopachrome tautomerase ... 29 7.5
U49785-1|AAB48546.1| 118|Homo sapiens D-dopachrome tautomerase ... 29 7.5
CR456431-1|CAG30317.1| 118|Homo sapiens DDT protein. 29 7.5
BT006970-1|AAP35616.1| 118|Homo sapiens D-dopachrome tautomeras... 29 7.5
BC015508-1|AAH15508.1| 118|Homo sapiens D-dopachrome tautomeras... 29 7.5
BC005971-1|AAH05971.1| 118|Homo sapiens D-dopachrome tautomeras... 29 7.5
AF058293-1|AAC13717.1| 118|Homo sapiens D-dopachrome tautomeras... 29 7.5
AF012434-1|AAC77468.1| 118|Homo sapiens D-dopachrome tautomeras... 29 7.5
>U58682-1|AAB07066.1| 69|Homo sapiens ribosomal protein S28
protein.
Length = 69
Score = 77.8 bits (183), Expect = 1e-14
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +2
Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRD 196
+P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+
Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVRE 52
>L05091-1|AAC15855.1| 69|Homo sapiens ribosomal protein S28
protein.
Length = 69
Score = 77.8 bits (183), Expect = 1e-14
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +2
Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRD 196
+P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+
Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVRE 52
>CR457055-1|CAG33336.1| 69|Homo sapiens RPS28 protein.
Length = 69
Score = 77.8 bits (183), Expect = 1e-14
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +2
Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRD 196
+P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+
Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVRE 52
>BC070218-1|AAH70218.1| 69|Homo sapiens ribosomal protein S28
protein.
Length = 69
Score = 77.8 bits (183), Expect = 1e-14
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +2
Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRD 196
+P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+
Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVRE 52
>BC070217-1|AAH70217.1| 69|Homo sapiens ribosomal protein S28
protein.
Length = 69
Score = 77.8 bits (183), Expect = 1e-14
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +2
Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRD 196
+P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+
Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVRE 52
>BC021239-1|AAH21239.1| 69|Homo sapiens ribosomal protein S28
protein.
Length = 69
Score = 77.8 bits (183), Expect = 1e-14
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +2
Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRD 196
+P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+
Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVRE 52
>BC000354-1|AAH00354.1| 69|Homo sapiens ribosomal protein S28
protein.
Length = 69
Score = 77.8 bits (183), Expect = 1e-14
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +2
Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRD 196
+P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+
Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVRE 52
>AB061846-1|BAB79484.1| 69|Homo sapiens ribosomal protein S28
protein.
Length = 69
Score = 77.8 bits (183), Expect = 1e-14
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +2
Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRD 196
+P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+
Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVRE 52
>AL023513-1|CAI19979.1| 57|Homo sapiens protein ( Human DNA
sequence from clone RP1-268D13 on chromosome
22q11.21-12.2. ).
Length = 57
Score = 42.7 bits (96), Expect = 4e-04
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +2
Query: 62 PNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIR 172
P L + KVLGRT SQGQCT+V VEF+ S+++ R
Sbjct: 8 PVKLVKATKVLGRTSSQGQCTRVCVEFMVSQSKRLRR 44
>BX641077-1|CAE46038.1| 615|Homo sapiens hypothetical protein
protein.
Length = 615
Score = 29.1 bits (62), Expect = 5.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 31 KLDITSQN-G*TQRSCSCRESAWPYRFSGPVYSSEGRVHWGDQPSDHQKR 177
K IT N G T R C S+ PY F P+YS ++ D D KR
Sbjct: 53 KKKITPGNYGNTPRKGPCAVSSNPYAFKNPIYSQPAWMN--DSHKDQSKR 100
>BC032456-1|AAH32456.1| 412|Homo sapiens ZCCHC6 protein protein.
Length = 412
Score = 29.1 bits (62), Expect = 5.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 31 KLDITSQN-G*TQRSCSCRESAWPYRFSGPVYSSEGRVHWGDQPSDHQKR 177
K IT N G T R C S+ PY F P+YS ++ D D KR
Sbjct: 53 KKKITPGNYGNTPRKGPCAVSSNPYAFKNPIYSQPAWMN--DSHKDQSKR 100
>AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1495
Score = 29.1 bits (62), Expect = 5.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 31 KLDITSQN-G*TQRSCSCRESAWPYRFSGPVYSSEGRVHWGDQPSDHQKR 177
K IT N G T R C S+ PY F P+YS ++ D D KR
Sbjct: 53 KKKITPGNYGNTPRKGPCAVSSNPYAFKNPIYSQPAWMN--DSHKDQSKR 100
>AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1259
Score = 29.1 bits (62), Expect = 5.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 31 KLDITSQN-G*TQRSCSCRESAWPYRFSGPVYSSEGRVHWGDQPSDHQKR 177
K IT N G T R C S+ PY F P+YS ++ D D KR
Sbjct: 53 KKKITPGNYGNTPRKGPCAVSSNPYAFKNPIYSQPAWMN--DSHKDQSKR 100
>AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1495
Score = 29.1 bits (62), Expect = 5.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 31 KLDITSQN-G*TQRSCSCRESAWPYRFSGPVYSSEGRVHWGDQPSDHQKR 177
K IT N G T R C S+ PY F P+YS ++ D D KR
Sbjct: 53 KKKITPGNYGNTPRKGPCAVSSNPYAFKNPIYSQPAWMN--DSHKDQSKR 100
>AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1259
Score = 29.1 bits (62), Expect = 5.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 31 KLDITSQN-G*TQRSCSCRESAWPYRFSGPVYSSEGRVHWGDQPSDHQKR 177
K IT N G T R C S+ PY F P+YS ++ D D KR
Sbjct: 53 KKKITPGNYGNTPRKGPCAVSSNPYAFKNPIYSQPAWMN--DSHKDQSKR 100
>AK055546-1|BAB70951.1| 750|Homo sapiens protein ( Homo sapiens
cDNA FLJ30984 fis, clone HHDPC2000456. ).
Length = 750
Score = 29.1 bits (62), Expect = 5.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 31 KLDITSQN-G*TQRSCSCRESAWPYRFSGPVYSSEGRVHWGDQPSDHQKR 177
K IT N G T R C S+ PY F P+YS ++ D D KR
Sbjct: 53 KKKITPGNYGNTPRKGPCAVSSNPYAFKNPIYSQPAWMN--DSHKDQSKR 100
>AF121255-1|AAF13034.2| 377|Homo sapiens protein translation
initiation factor 2C2 protein.
Length = 377
Score = 29.1 bits (62), Expect = 5.7
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 VVKVLGRTGSQGQCTQVKVEFIGETSRQI-IRNVKGPVRDETSSLFLNLNVKLGGCDRL 253
VV + G+T + +V +G ++ + ++NV+ S+L+L +NVKLGG + +
Sbjct: 37 VVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLWLKINVKLGGVNNI 95
>Y11151-1|CAA72037.1| 118|Homo sapiens phenylpyruvate tautomerase
II protein.
Length = 118
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 14 RVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCTQVKVEFIG 148
R+ A +SIL D+ NV R + +GS C Q+ + IG
Sbjct: 22 RLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQLSISSIG 66
>U84143-1|AAB41503.1| 118|Homo sapiens D-dopachrome tautomerase
protein.
Length = 118
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 14 RVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCTQVKVEFIG 148
R+ A +SIL D+ NV R + +GS C Q+ + IG
Sbjct: 22 RLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQLSISSIG 66
>U49785-1|AAB48546.1| 118|Homo sapiens D-dopachrome tautomerase
protein.
Length = 118
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 14 RVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCTQVKVEFIG 148
R+ A +SIL D+ NV R + +GS C Q+ + IG
Sbjct: 22 RLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQLSISSIG 66
>CR456431-1|CAG30317.1| 118|Homo sapiens DDT protein.
Length = 118
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 14 RVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCTQVKVEFIG 148
R+ A +SIL D+ NV R + +GS C Q+ + IG
Sbjct: 22 RLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQLSISSIG 66
>BT006970-1|AAP35616.1| 118|Homo sapiens D-dopachrome tautomerase
protein.
Length = 118
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 14 RVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCTQVKVEFIG 148
R+ A +SIL D+ NV R + +GS C Q+ + IG
Sbjct: 22 RLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQLSISSIG 66
>BC015508-1|AAH15508.1| 118|Homo sapiens D-dopachrome tautomerase
protein.
Length = 118
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 14 RVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCTQVKVEFIG 148
R+ A +SIL D+ NV R + +GS C Q+ + IG
Sbjct: 22 RLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQLSISSIG 66
>BC005971-1|AAH05971.1| 118|Homo sapiens D-dopachrome tautomerase
protein.
Length = 118
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 14 RVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCTQVKVEFIG 148
R+ A +SIL D+ NV R + +GS C Q+ + IG
Sbjct: 22 RLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQLSISSIG 66
>AF058293-1|AAC13717.1| 118|Homo sapiens D-dopachrome tautomerase
protein.
Length = 118
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 14 RVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCTQVKVEFIG 148
R+ A +SIL D+ NV R + +GS C Q+ + IG
Sbjct: 22 RLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQLSISSIG 66
>AF012434-1|AAC77468.1| 118|Homo sapiens D-dopachrome tautomerase
protein.
Length = 118
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 14 RVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCTQVKVEFIG 148
R+ A +SIL D+ NV R + +GS C Q+ + IG
Sbjct: 22 RLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQLSISSIG 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,837,005
Number of Sequences: 237096
Number of extensions: 972879
Number of successful extensions: 1679
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1679
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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