Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00031
(751 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 130 2e-31
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 130 2e-31
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 113 3e-26
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 92 7e-20
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 84 2e-17
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 36 0.006
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 32 0.076
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 27 0.11
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 31 0.13
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.31
SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr 1||... 29 0.71
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 0.94
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 29 0.94
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 28 1.2
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 28 1.6
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 28 1.6
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 27 2.2
SPBC21D10.08c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 27 2.2
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 2.9
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 27 2.9
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 2.9
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 2.9
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 3.8
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 27 3.8
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 3.8
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 26 5.0
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 26 5.0
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.0
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 26 5.0
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 26 6.6
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 6.6
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 26 6.6
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 26 6.6
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 25 8.7
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 25 8.7
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 130 bits (315), Expect = 2e-31
Identities = 62/71 (87%), Positives = 65/71 (91%)
Frame = -1
Query: 721 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 542
GERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITIT
Sbjct: 443 GERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITIT 502
Query: 541 NDKGRLSKEEI 509
NDKGRLSKEEI
Sbjct: 503 NDKGRLSKEEI 513
Score = 97.9 bits (233), Expect = 1e-21
Identities = 44/84 (52%), Positives = 61/84 (72%)
Frame = -3
Query: 506 RMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCND 327
RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+ I +
Sbjct: 515 RMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKE 574
Query: 326 TXKWLDSNQLADKEEYEHKQKELE 255
T +WLD N A K+EYE KQKELE
Sbjct: 575 TIEWLDHNTTAAKDEYEDKQKELE 598
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 130 bits (315), Expect = 2e-31
Identities = 62/71 (87%), Positives = 65/71 (91%)
Frame = -1
Query: 721 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 542
GERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITIT
Sbjct: 443 GERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITIT 502
Query: 541 NDKGRLSKEEI 509
NDKGRLSKEEI
Sbjct: 503 NDKGRLSKEEI 513
Score = 98.3 bits (234), Expect = 1e-21
Identities = 44/85 (51%), Positives = 63/85 (74%)
Frame = -3
Query: 506 RMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCND 327
RMV EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+T+ +
Sbjct: 515 RMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKE 574
Query: 326 TXKWLDSNQLADKEEYEHKQKELEA 252
T +WLDSN A K+E+E KQKELE+
Sbjct: 575 TIEWLDSNTTAAKDEFEAKQKELES 599
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 113 bits (272), Expect = 3e-26
Identities = 52/72 (72%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
Frame = -1
Query: 721 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITI 545
GER +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++KS K K+ I
Sbjct: 472 GERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVI 531
Query: 544 TNDKGRLSKEEI 509
NDKGRLS+E+I
Sbjct: 532 KNDKGRLSEEDI 543
Score = 77.0 bits (181), Expect = 3e-15
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Frame = -3
Query: 509 QRMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLKEKISDSDKQTILDKC 333
+RMV EAE++ ED KE I+A+N LE+Y +S+K +DE+L K+ DKQ +LD
Sbjct: 544 ERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAV 603
Query: 332 NDTXKWLD-SNQLADKEEYEHKQKELEA 252
D +WL+ + A KEE+E ++++L+A
Sbjct: 604 EDVAEWLEIHGEDASKEEFEDQRQKLDA 631
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 92.3 bits (219), Expect = 7e-20
Identities = 39/69 (56%), Positives = 53/69 (76%)
Frame = -1
Query: 721 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 542
GER + +DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+TNK++ IT+
Sbjct: 486 GERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVA 545
Query: 541 NDKGRLSKE 515
G E
Sbjct: 546 GSSGLTDSE 554
Score = 39.9 bits (89), Expect = 4e-04
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = -3
Query: 509 QRMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME--DEKLKEKISDSDKQTILDK 336
+ MV +AEKYR D +KE I+ N ES C ++S ++ +KL ++ + + I D
Sbjct: 556 EAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQAVEDLRSKITDL 615
Query: 335 CNDTXKWLDSNQLADKEEYEHKQKELEAFTIR 240
K ++ E+ + K E++ +++
Sbjct: 616 RETVAKVNAGDEGITSEDMKKKIDEIQQLSLK 647
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 83.8 bits (198), Expect = 2e-17
Identities = 38/71 (53%), Positives = 50/71 (70%)
Frame = -1
Query: 721 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 542
GER +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+EK+T + I IT
Sbjct: 448 GERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEIT 507
Query: 541 NDKGRLSKEEI 509
N G LS +I
Sbjct: 508 NSVGHLSSTKI 518
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 35.9 bits (79), Expect = 0.006
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Frame = -3
Query: 512 DQRMVNEAEKYRNEDD-KQKETIQAKNALESYCFS-----MKSTMEDEKLKEKISDSD-K 354
D +NE +K+ +E+D T +N S S + +E + K +D+D K
Sbjct: 220 DSENINEVKKFEDEEDTSTPNTSSFQNNSSSLDLSDNLSYLLQYLEGNRSKINATDADVK 279
Query: 353 QTILDKCNDTXKWLDSNQLADKEEYEHKQK---ELEAFTIR*LRRCTRVPE-ESPE 198
Q + D + KW + ++ +E YE +K EL ++T L T+V + ++P+
Sbjct: 280 QLLSDVKKNKSKWANDQRIGQEELYEAAEKVVLELRSYTEHSLAFLTKVSKRDAPD 335
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 32.3 bits (70), Expect = 0.076
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Frame = -1
Query: 628 VTFDIDANGILNVSA---IEKSTNKENKITITNDKGR---LSKEEISVWLMRQRSTETRM 467
VT + D + LN + +E K+N I N + LSKEE + +Q + R+
Sbjct: 49 VTHETDLDEFLNTAELGEVEFIAEKQNVTVIQNPEQNPFLLSKEEAARSKQKQEKNKDRL 108
Query: 466 TSKRRPSRPRMHWNLTASA 410
T RRP HW+ T +A
Sbjct: 109 TIPRRP-----HWDQTTTA 122
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 26.6 bits (56), Expect(2) = 0.11
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 470 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTXKWLDSNQLA 294
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 293 DK 288
DK
Sbjct: 238 DK 239
Score = 23.8 bits (49), Expect(2) = 0.11
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 221 RVPEESPEVCRASRAEHPEPEVP 153
++ ++ P RASRA EP+ P
Sbjct: 235 KLGDKGPAAARASRAAAEEPQAP 257
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.5 bits (68), Expect = 0.13
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Frame = -3
Query: 581 REVHQQGEQDHHYQRQRSSLQGRD-QRMVNEAEKYRNEDDKQK-ETIQAKNALESYCFSM 408
R Q ++ +RQ + + R+ QR+ E EK + E ++QK E Q + E
Sbjct: 619 RLAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQ 678
Query: 407 KSTMEDEKL--KEKISDSDKQTILDKCNDTXKWLDSNQLADKEEYEHKQKEL 258
+ + EK+ ++++ + +++ IL++ K DKEE E +++EL
Sbjct: 679 QQEADREKMAREQRLREEEEKRILEERKRREK-------LDKEEEERRRREL 723
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.3 bits (65), Expect = 0.31
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = -3
Query: 539 RQRSSLQGRDQRMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 360
RQ++S+ + + N+ E + DDKQ + KN+LE+ M+ + E K D
Sbjct: 1261 RQKTSIVAKYR---NKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDD 1316
Query: 359 DKQTILDKCNDTXK 318
++ LDK D K
Sbjct: 1317 NEMEDLDKMEDLEK 1330
>SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 29.1 bits (62), Expect = 0.71
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = -3
Query: 392 DEKLKEKISDSDKQTILDKCNDTXKWLDSNQLADKEEYEHKQKELEAFTIR*LRRCTRVP 213
DE+++ + D ++ L K N+ L+ N A EY + +E EAF IR RR
Sbjct: 29 DEEIESSLKDVRQE--LQKLNEEQSRLEKN--AQIPEY--RVRESEAFLIRMQRRLESAE 82
Query: 212 EESPEVCRAS 183
EE + RAS
Sbjct: 83 EEFEKQRRAS 92
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 28.7 bits (61), Expect = 0.94
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = -3
Query: 521 QGRDQRMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 342
Q ++ ++EK ++ K + KNA ++ M DE+ E S K+
Sbjct: 96 QSVEEEEEEDSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKK 155
Query: 341 DKC-NDTXKWLDSNQLADKEEYEHKQKE 261
K +D + LD + E+ + K+K+
Sbjct: 156 SKSKDDGSEALDDGDIESSEKDKKKKKK 183
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 28.7 bits (61), Expect = 0.94
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 15/139 (10%)
Frame = -3
Query: 494 EAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED-----------EKLKEKISDSDKQ 351
EAE DK ET+ KNALE Y + ++ ++D K KE ++ ++
Sbjct: 561 EAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAPFTNEEESSKFKEMLTKAE-D 619
Query: 350 TILDKCNDTXKWLDSNQLAD--KEEYEHKQKELEAFTIR*LRRCTRVPEESPEVCRASRA 177
+ ++ DT K + + +L D + +Q+ L+A + R+ + E+ + S A
Sbjct: 620 WLYEEGEDTTKAVYTAKLEDLMRVGGPIRQRYLDAEEAK--RQKVQAEREAAKAATKSEA 677
Query: 176 EHPEPEVP-PPGLEALAPP 123
E +P G APP
Sbjct: 678 EKQKPSGKFEEGTGGRAPP 696
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -3
Query: 389 EKLKEKISDSDKQTILDKCNDTXKWLDSNQLADK--EEYEHKQKELEAFTIR*LRRCTRV 216
++ KE+ S S ++LD N + N + D+ E +HK +++ T+R L RC ++
Sbjct: 404 DRFKERKS-SLVHSLLDAANAIFESCGLNDIMDETLEFLKHKNPQVKTETLRWLNRCLQL 462
Query: 215 PEESP 201
+ P
Sbjct: 463 TDVCP 467
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 380 KEKISDSDKQTILDKCNDTXKWL-DSNQLADKEEYEHKQKELE 255
+EKI +++TI D ++ L + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.9 bits (59), Expect = 1.6
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = -3
Query: 542 QRQRSSLQGRDQRMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKL-KEKIS 366
Q+QR+ + Q+ EAE+ + E ++Q+ Q K E + K E EKL KE+I
Sbjct: 81 QKQRAQEERIRQK---EAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIR 136
Query: 365 DSDKQTILDKCNDTXKWLDSNQLADKEEYEHKQKE 261
++Q ++ + + + Q +E+ +K+++
Sbjct: 137 LQEQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/86 (18%), Positives = 38/86 (44%)
Frame = -3
Query: 539 RQRSSLQGRDQRMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 360
+QR + ++ N ++ + + KQK +Q K + S K E +KL + ++
Sbjct: 31 KQREECKELQSKITNLRKQLKEGNKKQKRALQQKISQMEADLSQKHATERQKLDKGDEET 90
Query: 359 DKQTILDKCNDTXKWLDSNQLADKEE 282
++ D N + ++ ++ E+
Sbjct: 91 NETQQEDLLNTLLQQMEDTKITTAEK 116
>SPBC21D10.08c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = -3
Query: 359 DKQTILDKCNDTXKWLDSNQLADKEEYEHKQKELEAFTIR*LRRCTRVPEESPEVCRASR 180
+K L K + WL Q K + QK+LE + +R + + E + S+
Sbjct: 183 NKVQTLGKAKNKKHWLGVYQSFGKASVDQIQKQLECYNVR-MMELNKTDENNESAICESQ 241
Query: 179 AEHPEPE 159
A E E
Sbjct: 242 ASSKEDE 248
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 27.1 bits (57), Expect = 2.9
Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -1
Query: 277 STSRKNWKHLQSDNYE-DVP 221
S +R NW H++ +NY D+P
Sbjct: 102 SVNRSNWDHIRQENYSPDIP 121
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 616 IDANGILNVSAIEKSTNKENKITITNDKGRLSKEE-ISVWL 497
+ + GI+ S +E N I+ + G ++EE IS+WL
Sbjct: 508 LHSKGIITTSQLESLRNNTEWISSVAENGEKTEEELISIWL 548
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 503 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 399
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 566 QGEQDHHYQRQRSSLQGRDQRMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 402
+ E H +S + Q++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 285 KNEFSSHPAFNATSSETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +3
Query: 588 ETLRIPLASMSKVTSI*GTPRGAGGIP 668
E L PLA MS TSI G G GG P
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFP 102
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 26.6 bits (56), Expect = 3.8
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = -3
Query: 566 QGEQDHHYQRQRSSLQGRDQRMVNEAEKYR---NEDDKQKETIQAKNALESYCFSMKSTM 396
Q + +H + L+ QRM N E+Y+ E +K+ + + KNA+ + M
Sbjct: 344 QEKLEHEQHSRNQKLEAAKQRMDNIREEYKVITQERNKKIQETEKKNAMIEMTEQKIAGM 403
Query: 395 EDEKLKEKIS 366
+E L+ +IS
Sbjct: 404 REE-LESQIS 412
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = -1
Query: 586 AIEKSTNKENKITITNDKGRLSKEEISVWLMRQRSTETRMTSKR 455
AIE+ N+E ++ + ++ R EEI + + S+ T +T++R
Sbjct: 520 AIERRRNEEEELARSRERARKKAEEIKISSSKMNSSPT-ITNER 562
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 26.2 bits (55), Expect = 5.0
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = -3
Query: 626 HLRHRCQRY-PQRFRYREVHQQGEQDHHYQRQRSSLQGRDQRMVNEAEKYRNEDDKQKET 450
+L H Y P + R + +Q H + Q L+ +++M EKY++ D ++
Sbjct: 266 NLHHLINDYRPHQSRESLIMLLEKQLKHEESQVELLRTHNRQMTETLEKYKSLDFNMEKE 325
Query: 449 IQAKNALESYCFSMKSTMEDE-KLKEKISDSDKQ 351
L+S S EDE K + S +D++
Sbjct: 326 GDVIQQLKSSIKKPLSGAEDEQKSRSMFSKNDEK 359
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 5.0
Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Frame = -3
Query: 542 QRQRSSLQGRDQRMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISD 363
Q+ +++ ++ AE+ N + ++E Q K A+E + + E E+ +E
Sbjct: 784 QKLAEAIREAEEEAARAAEEEANRELHEQEEAQ-KRAIEERTRAAREAKEREQ-REMAEK 841
Query: 362 SDKQTILDKCNDTXKWLDSNQLADKEEYEHKQKELEAFTIR*LRR----CTRVPEESPEV 195
++Q + + D S +LA+K + + RR V +SP
Sbjct: 842 LERQRRIQQERDEEI---SRKLAEKAAARRANIGASSPSPGAWRRGGASAGGVSRDSPRY 898
Query: 194 CRA--SRAEHPEPEVPPPGLEALAPPSRRS 111
R SR P E P A PPSRR+
Sbjct: 899 SRGGYSRGSVPPRETLAPSKGAYVPPSRRN 928
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 212 EESPEVCRASRAEHPEPE 159
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 292 TRRSMSTSRKNWKHLQSDNYEDVPGCRRSPR 200
TR+S+S S+ KH+ ++ +D+P RS R
Sbjct: 578 TRKSISHSKNTDKHVGNELPQDIPSWLRSLR 608
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -3
Query: 587 RYREVHQQGEQDHHYQRQRSSLQGRDQRMVNEAEKYRNEDDKQKE 453
R+R+ H + QD +R + D+R + YRN+ + +E
Sbjct: 171 RHRDRHHRSNQDRSRERSDNEQHSSDKR-EHSRRSYRNDRNNWRE 214
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 25.8 bits (54), Expect = 6.6
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Frame = -3
Query: 368 SDSDKQTILDKCNDTXKWLD--SNQLAD---KEEYEHKQKELEAFTIR*LRRCTRVPEES 204
S S + + LDK ND K ++ +N+ KE+ Q E T + T P+E
Sbjct: 370 SSSSEPSNLDKINDVKKNIEVSANEPQPRPVKEDVPKSQVGGETDTTDVINNST--PKEE 427
Query: 203 PEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT 99
E ++ E PP E P S KP+
Sbjct: 428 TEESPSTELPETGKEQPPNKAEPAVPTEASSTKPS 462
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 25.8 bits (54), Expect = 6.6
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -3
Query: 536 QRSSLQGRDQRMVNEAEKYR--NEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISD 363
+R+ +Q R + N ++ E DK ET+ K A+ S+ +++++++ K+S
Sbjct: 219 ERNEMQERLDILTNLLDELTLLYETDKFDETM--KEAILSF-----EDLKEQEIRRKVSS 271
Query: 362 SDKQTILDKCND 327
D L+ CN+
Sbjct: 272 DDVHNYLESCNN 283
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = -3
Query: 545 YQRQRSSLQGRDQRMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 366
+ +Q SSL + N A + + K E + LE Y ++ D K++ K+
Sbjct: 831 FDKQTSSLAQLRYSIQNVAHAQKESEVKYNELNEQVKTLEGYVETVLEKFNDLKIENKVP 890
Query: 365 DS 360
++
Sbjct: 891 ET 892
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.4 bits (53), Expect = 8.7
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -3
Query: 500 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC 333
V + E+ + D T+Q K +S FS K + E L +KIS+ D QT ++C
Sbjct: 402 VIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLLKKISEIDSQTSFEQC 452
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = -3
Query: 605 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRD---QRMVNEAEKYRNEDDKQK 456
R P R +YRE H + + H R QGR ++ + +++Y ++ +
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSYKKRSHRSDRYTERENPDR 373
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,642,336
Number of Sequences: 5004
Number of extensions: 49876
Number of successful extensions: 295
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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