Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00030
         (814 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   142   2e-35
DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domai...    25   2.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   2.8  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   6.4  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  142 bits (343), Expect = 2e-35
 Identities = 64/88 (72%), Positives = 76/88 (86%)
 Frame = +3

Query: 240 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 419
           F + +L+AE V GR+VL NFHGM LTTDKLR MV KWQTLIE ++DVKTTDG++LRVFCI
Sbjct: 84  FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFCI 143

Query: 420 GFTNKDSLSQRKTCYAQHTQVRAIRKKM 503
           GFT KDS+SQRKTCYAQH+Q++ IR KM
Sbjct: 144 GFTIKDSMSQRKTCYAQHSQIKNIRAKM 171



 Score =  123 bits (297), Expect = 6e-30
 Identities = 57/67 (85%), Positives = 61/67 (91%)
 Frame = +1

Query: 52  IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 231
           +VDPFTRKDWYDVKAP+MF  RQ G TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21  VVDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80

Query: 232 ERSFRKF 252
           ERSFRKF
Sbjct: 81  ERSFRKF 87



 Score = 82.2 bits (194), Expect = 2e-17
 Identities = 37/53 (69%), Positives = 46/53 (86%)
 Frame = +2

Query: 509 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 667
           II R++T+++L+ VV KL+PDSIAKDIEKAC  +YPL DV IRKVKVLK+PRF
Sbjct: 174 IIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRF 226


>DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 122

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 283 LRPCTYSAIN*ICGKTFPRQ 224
           +RP TY  IN ICG+ + R+
Sbjct: 77  VRPDTYFRINCICGEEYDRE 96


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = -3

Query: 680 LRDLENGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSP 549
           L  L NG    +   G  H   G    RPSR    ++  S C P
Sbjct: 141 LLQLVNGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPSICRP 184


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -1

Query: 640 LSDANIAQRVDAMAGLLDVLGNGVRNQLV 554
           L+ AN  QR++    L D++G+  RN+++
Sbjct: 560 LAIANALQRINTPKYLYDIIGDYFRNRVL 588


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,831
Number of Sequences: 2352
Number of extensions: 17126
Number of successful extensions: 47
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)