Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00030
(814 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 147 1e-35
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 147 1e-35
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 147 1e-35
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 142 7e-34
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 137 2e-32
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 114 1e-25
AY070661-1|AAL48132.1| 455|Drosophila melanogaster RH04535p pro... 29 10.0
AE014298-2149|AAF48454.1| 455|Drosophila melanogaster CG11655-P... 29 10.0
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 147 bits (357), Expect = 1e-35
Identities = 84/178 (47%), Positives = 103/178 (57%), Gaps = 5/178 (2%)
Frame = +3
Query: 240 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 419
F + +LIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 420 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHATSLTLNSGRW*TS*FLTPLPRTSRRP 599
GFT KD SQRKTCYAQ +QVR IR +M + + + + L + + +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKS 203
Query: 600 AMASTLCAMFASER*KC*RGPVFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYE 758
+ K + P F++SKL+ELH SE RPEGYE
Sbjct: 204 CQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYE 261
Score = 116 bits (279), Expect = 4e-26
Identities = 53/67 (79%), Positives = 59/67 (88%)
Frame = +1
Query: 52 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 231
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 232 ERSFRKF 252
ERSFRKF
Sbjct: 81 ERSFRKF 87
Score = 78.2 bits (184), Expect = 1e-14
Identities = 36/53 (67%), Positives = 45/53 (84%)
Frame = +2
Query: 509 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 667
IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF
Sbjct: 174 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRF 226
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 147 bits (357), Expect = 1e-35
Identities = 84/178 (47%), Positives = 103/178 (57%), Gaps = 5/178 (2%)
Frame = +3
Query: 240 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 419
F + +LIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 34 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 93
Query: 420 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHATSLTLNSGRW*TS*FLTPLPRTSRRP 599
GFT KD SQRKTCYAQ +QVR IR +M + + + + L + + +
Sbjct: 94 GFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKS 153
Query: 600 AMASTLCAMFASER*KC*RGPVFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYE 758
+ K + P F++SKL+ELH SE RPEGYE
Sbjct: 154 CQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYE 211
Score = 78.2 bits (184), Expect = 1e-14
Identities = 36/53 (67%), Positives = 45/53 (84%)
Frame = +2
Query: 509 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 667
IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF
Sbjct: 124 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRF 176
Score = 45.2 bits (102), Expect = 1e-04
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1
Query: 181 GRVFEVSLADLQADTDAERSFRKF 252
GRVFEVSLADLQ D D ERSFRKF
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKF 37
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 147 bits (357), Expect = 1e-35
Identities = 84/178 (47%), Positives = 103/178 (57%), Gaps = 5/178 (2%)
Frame = +3
Query: 240 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 419
F + +LIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 420 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHATSLTLNSGRW*TS*FLTPLPRTSRRP 599
GFT KD SQRKTCYAQ +QVR IR +M + + + + L + + +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKS 203
Query: 600 AMASTLCAMFASER*KC*RGPVFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYE 758
+ K + P F++SKL+ELH SE RPEGYE
Sbjct: 204 CQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYE 261
Score = 116 bits (279), Expect = 4e-26
Identities = 53/67 (79%), Positives = 59/67 (88%)
Frame = +1
Query: 52 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 231
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 232 ERSFRKF 252
ERSFRKF
Sbjct: 81 ERSFRKF 87
Score = 78.2 bits (184), Expect = 1e-14
Identities = 36/53 (67%), Positives = 45/53 (84%)
Frame = +2
Query: 509 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 667
IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF
Sbjct: 174 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRF 226
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 142 bits (343), Expect = 7e-34
Identities = 66/90 (73%), Positives = 74/90 (82%)
Frame = +3
Query: 240 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 419
F + +LIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 420 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 509
GFT KD SQRKTCYAQ +QVR IR +M +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTD 173
Score = 116 bits (279), Expect = 4e-26
Identities = 53/67 (79%), Positives = 59/67 (88%)
Frame = +1
Query: 52 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 231
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 232 ERSFRKF 252
ERSFRKF
Sbjct: 81 ERSFRKF 87
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 137 bits (331), Expect = 2e-32
Identities = 64/85 (75%), Positives = 70/85 (82%)
Frame = +3
Query: 240 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 419
F + +LIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 85 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 144
Query: 420 GFTNKDSLSQRKTCYAQHTQVRAIR 494
GFT KD SQRKTCYA +QVR IR
Sbjct: 145 GFTAKDQQSQRKTCYAHESQVRKIR 169
Score = 106 bits (255), Expect = 3e-23
Identities = 50/68 (73%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Frame = +1
Query: 52 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADTD 228
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ KGRVFEVSL DLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80
Query: 229 AERSFRKF 252
E SFRKF
Sbjct: 81 PEHSFRKF 88
Score = 78.2 bits (184), Expect = 1e-14
Identities = 36/53 (67%), Positives = 45/53 (84%)
Frame = +2
Query: 509 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 667
IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF
Sbjct: 176 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRF 228
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 114 bits (275), Expect = 1e-25
Identities = 68/156 (43%), Positives = 85/156 (54%), Gaps = 5/156 (3%)
Frame = +3
Query: 306 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 485
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 486 AIRKKMCESLHATSLTLNSGRW*TS*FLTPLPRTSRRPAMASTLCAMFASER*KC*RGPV 665
IR +M + + + + L + + + + K + P
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPR 120
Query: 666 FEISKLMELHXXXXXXXXXXXDKSE-----RPEGYE 758
F++SKL+ELH SE RPEGYE
Sbjct: 121 FDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYE 156
Score = 78.2 bits (184), Expect = 1e-14
Identities = 36/53 (67%), Positives = 45/53 (84%)
Frame = +2
Query: 509 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 667
IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF
Sbjct: 69 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRF 121
>AY070661-1|AAL48132.1| 455|Drosophila melanogaster RH04535p
protein.
Length = 455
Score = 28.7 bits (61), Expect = 10.0
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = -2
Query: 300 GSCRAHYVLAHIR--RLTEFAERPFRVSVSL*ISQGNFENSSLQS-FRSNFRSLGTVDKR 130
G H +AH R LT ER RV + L N S+LQ R +FR L +VD
Sbjct: 21 GFASTHGWMAHFRPAALTLQMERGDRVQLKL----ENVAPSTLQQPTRYHFR-LESVDTD 75
Query: 129 GADLPLAEHRRSLDIVPIFASEWVDNLLLNTFF 31
A +P SLD+ +W ++++N F
Sbjct: 76 LASVPGENATISLDVFNTDTRDWTGDIVVNGHF 108
>AE014298-2149|AAF48454.1| 455|Drosophila melanogaster CG11655-PA
protein.
Length = 455
Score = 28.7 bits (61), Expect = 10.0
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = -2
Query: 300 GSCRAHYVLAHIR--RLTEFAERPFRVSVSL*ISQGNFENSSLQS-FRSNFRSLGTVDKR 130
G H +AH R LT ER RV + L N S+LQ R +FR L +VD
Sbjct: 21 GFASTHGWMAHFRPAALTLQMERGDRVQLKL----ENVAPSTLQQPTRYHFR-LESVDTD 75
Query: 129 GADLPLAEHRRSLDIVPIFASEWVDNLLLNTFF 31
A +P SLD+ +W ++++N F
Sbjct: 76 LASVPGENATISLDVFNTDTRDWTGDIVVNGHF 108
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,209,287
Number of Sequences: 53049
Number of extensions: 760854
Number of successful extensions: 2190
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2189
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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