Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00029
(695 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 143 4e-33
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 131 2e-29
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 126 7e-28
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 119 8e-26
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 108 1e-22
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 102 1e-20
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 102 1e-20
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 100 4e-20
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 91 2e-17
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 89 7e-17
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 89 1e-16
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 86 9e-16
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 75 2e-12
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 73 9e-12
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 71 3e-11
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 70 5e-11
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 69 1e-10
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 64 3e-09
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 53 8e-06
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 49 1e-04
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 48 3e-04
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 46 0.001
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 43 0.008
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 42 0.011
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 41 0.033
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 40 0.058
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 39 0.10
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 39 0.13
UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.18
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 37 0.41
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 37 0.54
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 36 0.95
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 35 2.2
UniRef50_UPI00015B58EF Cluster: PREDICTED: similar to Chm protei... 33 5.1
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 5.1
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 8.8
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 143 bits (346), Expect = 4e-33
Identities = 64/88 (72%), Positives = 77/88 (87%)
Frame = +2
Query: 239 FPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 418
F + +++AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCI
Sbjct: 84 FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCI 143
Query: 419 GFTNKDSLSQRKTCYAQHTQVRAIRKKM 502
GFT KDS+SQRKTCYAQH+Q++ IR KM
Sbjct: 144 GFTIKDSMSQRKTCYAQHSQIKNIRAKM 171
Score = 124 bits (299), Expect = 2e-27
Identities = 57/68 (83%), Positives = 62/68 (91%)
Frame = +3
Query: 51 IVDPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 230
+VDPFTRKDWYDVKAP+MF QVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80
Query: 231 ERSFRKFR 254
ERSFRKF+
Sbjct: 81 ERSFRKFK 88
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = +1
Query: 508 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
II R++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVLK+P
Sbjct: 174 IIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKP 224
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 131 bits (316), Expect = 2e-29
Identities = 60/90 (66%), Positives = 72/90 (80%)
Frame = +2
Query: 239 FPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 418
F + ++I E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 419 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 508
GFT K + RKT YAQH QVR IRKKM E
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 103 bits (247), Expect = 4e-21
Identities = 49/68 (72%), Positives = 58/68 (85%)
Frame = +3
Query: 51 IVDPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 230
+VDPF++KDWYDVKAP+MF+ +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 231 ERSFRKFR 254
E +FRKF+
Sbjct: 78 EVAFRKFK 85
Score = 81.8 bits (193), Expect = 1e-14
Identities = 37/57 (64%), Positives = 48/57 (84%)
Frame = +1
Query: 490 QKENV*IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
+K+ + I+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKP 221
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 126 bits (303), Expect = 7e-28
Identities = 58/92 (63%), Positives = 72/92 (78%)
Frame = +2
Query: 233 KVFPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 412
+ + +I++ AE VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+F
Sbjct: 474 QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLF 533
Query: 413 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 508
CI FT K +KTCYAQ +Q+R IR+KM E
Sbjct: 534 CIAFTKKRVNQNKKTCYAQSSQIRQIRRKMRE 565
Score = 100 bits (239), Expect = 4e-20
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +3
Query: 57 DPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 236
DPF +KDWYD+KAPS+F VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED--Q 474
Query: 237 SFRKFR 254
++RK R
Sbjct: 475 AYRKIR 480
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +1
Query: 508 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
I+T T+ +L+E+V K IP+SI ++IEKA IYPL++V IRKVK+LK P
Sbjct: 566 IMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAP 616
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 119 bits (286), Expect = 8e-26
Identities = 57/97 (58%), Positives = 74/97 (76%)
Frame = +2
Query: 233 KVFPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 412
+VF +I++ AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF
Sbjct: 78 QVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVF 137
Query: 413 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHAT 523
I FT K ++KT YA+ ++V+AIRKKM + L T
Sbjct: 138 AICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTET 174
Score = 84.2 bits (199), Expect = 3e-15
Identities = 43/71 (60%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
Frame = +3
Query: 54 VDPFTRKDWYDVKAPSMFSKX----QVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 221
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK-- 73
Query: 222 TDAERSFRKFR 254
D + FRK +
Sbjct: 74 DDESQVFRKIK 84
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 108 bits (260), Expect = 1e-22
Identities = 50/98 (51%), Positives = 70/98 (71%)
Frame = +2
Query: 239 FPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 418
F +I++ + VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I
Sbjct: 81 FRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAI 140
Query: 419 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHATSLT 532
T + +KT YA +Q+RAIR+KM E + + T
Sbjct: 141 AVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREAST 178
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +3
Query: 57 DPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 236
DPF RKDWY +KAP+ F+ VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED--H 79
Query: 237 SFRKFR 254
+FRK +
Sbjct: 80 AFRKIK 85
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = +1
Query: 508 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
II R+ + L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P
Sbjct: 171 IIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQP 221
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 102 bits (244), Expect = 1e-20
Identities = 46/80 (57%), Positives = 62/80 (77%)
Frame = +2
Query: 263 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 442
E V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S
Sbjct: 91 EDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSN 150
Query: 443 SQRKTCYAQHTQVRAIRKKM 502
+KT YA+ Q++ IRK M
Sbjct: 151 QIKKTSYAKSAQIKKIRKIM 170
Score = 73.3 bits (172), Expect = 5e-12
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = +3
Query: 51 IVDPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 212
I +PF++K+WY+VK P F + VG +VN+T GT+IASE LKGRV EV+LADL
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADL 75
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 102 bits (244), Expect = 1e-20
Identities = 45/93 (48%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Frame = +2
Query: 233 KVFPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 412
K + +++++ + V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF
Sbjct: 82 KAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVF 141
Query: 413 CIGFTNKDSL---SQRKTCYAQHTQVRAIRKKM 502
+ FT K S S TCYA+ +QVRAIR+K+
Sbjct: 142 TLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKI 174
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/67 (47%), Positives = 47/67 (70%)
Frame = +3
Query: 54 VDPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 233
+DP +RK+WYD +AP FS G TLV ++ G +IASE +KGRV E +LADL+ D +
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNSND 81
Query: 234 RSFRKFR 254
+++RK +
Sbjct: 82 KAWRKVK 88
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +1
Query: 511 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
IT + + E LI + K IEK I+PL+++ IRKVKVLKRP
Sbjct: 178 ITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRP 227
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 100 bits (239), Expect = 4e-20
Identities = 48/91 (52%), Positives = 63/91 (69%)
Frame = +2
Query: 236 VFPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 415
+F + ++ E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F
Sbjct: 6 IFRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFV 65
Query: 416 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 508
I FT K Q+ YAQ T+++ +R ++ E
Sbjct: 66 IAFTKKQE-DQKSHAYAQTTRIKKLRAEIVE 95
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +1
Query: 496 ENV*IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
E V ++ R+V +L+ VV KLIPDSI +D I+PL +RKVKVLK+P
Sbjct: 92 EIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKP 146
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 91.5 bits (217), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%)
Frame = +3
Query: 54 VDPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 233
VD ++KDWYD+KAP+MF+ +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D E
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQND---E 78
Query: 234 RSFRKFR 254
+FRKF+
Sbjct: 79 VAFRKFK 85
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 89.4 bits (212), Expect = 7e-17
Identities = 45/68 (66%), Positives = 54/68 (79%)
Frame = +3
Query: 51 IVDPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 230
+VDPF++KDWYDV AP+MF+ +G TLV RTQGTKIAS+ GRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQND--- 74
Query: 231 ERSFRKFR 254
E +FRKF+
Sbjct: 75 EVAFRKFK 82
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/57 (63%), Positives = 48/57 (84%)
Frame = +1
Query: 490 QKENV*IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
+K+ + I+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P
Sbjct: 112 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKP 168
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +2
Query: 239 FPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 391
F + ++I E VQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 78 FRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/88 (44%), Positives = 60/88 (68%)
Frame = +2
Query: 245 QIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 424
++++I + V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I F
Sbjct: 82 KVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAF 141
Query: 425 TNKDSLSQRKTCYAQHTQVRAIRKKMCE 508
T QRKT YAQ +Q++ IRKK+ E
Sbjct: 142 TKSIKNQQRKTTYAQRSQIKDIRKKIVE 169
Score = 67.3 bits (157), Expect = 3e-10
Identities = 29/67 (43%), Positives = 46/67 (68%)
Frame = +3
Query: 54 VDPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 233
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADLQ +D +
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD-Q 77
Query: 234 RSFRKFR 254
++RK +
Sbjct: 78 MAWRKVK 84
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/57 (35%), Positives = 40/57 (70%)
Frame = +1
Query: 490 QKENV*IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
+K+ V I+ ++V+ + +++ +S+AK+I KA I+PL+++ +RKVK++KRP
Sbjct: 164 RKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRP 220
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 85.8 bits (203), Expect = 9e-16
Identities = 33/94 (35%), Positives = 61/94 (64%)
Frame = +2
Query: 233 KVFPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 412
+ + +++ + VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F
Sbjct: 82 EAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLF 141
Query: 413 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESL 514
+ FT + Q + CYA+ V+ +R ++ + +
Sbjct: 142 VVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMI 175
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +3
Query: 57 DPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 236
+ RK+WYDV AP+ F K Q T+ N+TQGT+IA++ L+GRVFE +LADL E
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 237 SFRKFR 254
++RK R
Sbjct: 83 AYRKVR 88
Score = 37.1 bits (82), Expect = 0.41
Identities = 16/51 (31%), Positives = 34/51 (66%)
Frame = +1
Query: 508 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
+I R ++ +++E V+ L + ++ + + C+ I PLR++ IRKV+V++ P
Sbjct: 174 MIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTP 224
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/78 (44%), Positives = 49/78 (62%)
Frame = +2
Query: 269 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 448
++G + F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T +
Sbjct: 43 IKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYV 102
Query: 449 RKTCYAQHTQVRAIRKKM 502
+KTCY +H+ + IRK M
Sbjct: 103 KKTCYVKHSDEKKIRKIM 120
Score = 41.5 bits (93), Expect = 0.019
Identities = 15/49 (30%), Positives = 34/49 (69%)
Frame = +1
Query: 508 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 654
+I +++ ++++++ KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 123 VIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 72.5 bits (170), Expect = 9e-12
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +2
Query: 275 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 454
G V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S +
Sbjct: 89 GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKN 148
Query: 455 TCYAQHTQVRAIRKKMCESL 514
YA + R +R M ++L
Sbjct: 149 HTYANSHKARQVRDVMIKAL 168
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/95 (37%), Positives = 58/95 (61%)
Frame = +2
Query: 233 KVFPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 412
K + Q Q++++ G+ L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF
Sbjct: 83 KFYLQTQLVSD---GK-CLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVF 138
Query: 413 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLH 517
I FT++ +RK C+ + +R +R + E+LH
Sbjct: 139 VIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLH 173
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = +3
Query: 57 DPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 236
DP+ +K+WY V AP+ F +G T V +T G ++A++ + RV+EV+L DL +
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLN 79
Query: 237 SFRKFR*SPNMCKDVMC 287
KF + D C
Sbjct: 80 GNTKFYLQTQLVSDGKC 96
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/71 (42%), Positives = 46/71 (64%)
Frame = +2
Query: 296 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 475
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 476 QVRAIRKKMCE 508
Q RA+R+++ +
Sbjct: 156 QKRALRRRITD 166
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = +1
Query: 508 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 654
II ++ N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 167 IIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 68.5 bits (160), Expect = 1e-10
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +2
Query: 236 VFPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 415
V + ++I E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC
Sbjct: 65 VVRKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFC 123
Query: 416 IGF-TNKDSLSQRKTCYAQHTQVRAI 490
+G+ TN + R+ AQ+ QV I
Sbjct: 124 VGYTTNVTTRYARQLVCAQYQQVHQI 149
Score = 68.5 bits (160), Expect = 1e-10
Identities = 27/47 (57%), Positives = 39/47 (82%)
Frame = +1
Query: 520 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
D ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P
Sbjct: 158 DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKP 204
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/59 (52%), Positives = 37/59 (62%)
Frame = +3
Query: 69 RKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFR 245
+KD YDVKA +MF+ +G T V R Q TK+ S GL G VFE SLA LQ D R F+
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQNDKVVVRKFK 70
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +1
Query: 553 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKP 36
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 52.8 bits (121), Expect = 8e-06
Identities = 32/94 (34%), Positives = 53/94 (56%)
Frame = +2
Query: 269 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 448
V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G T +
Sbjct: 82 VEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTA 141
Query: 449 RKTCYAQHTQVRAIRKKMCESLHATSLTLNSGRW 550
+K+ A+RKKM E+L + L+SG++
Sbjct: 142 QKS---------AMRKKMIETLVKKAAELDSGQF 166
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/66 (37%), Positives = 42/66 (63%)
Frame = -1
Query: 227 VSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLXLAEHRRSLDIVPIFASEWVDNL 48
+ + L ISQGN ++S L+ FR + S + +K A++ AE RR L+++P+ S+ V L
Sbjct: 76 ILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDRRRLNVIPVLLSKRVGCL 135
Query: 47 LLNTFF 30
LL++ F
Sbjct: 136 LLSSLF 141
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/70 (37%), Positives = 43/70 (61%)
Frame = +2
Query: 302 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 481
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K + S + + V
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQMQA-IREMMV 142
Query: 482 RAIRKKMCES 511
++K+ E+
Sbjct: 143 DIVKKRASET 152
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +2
Query: 269 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 448
VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S
Sbjct: 77 VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSS 136
Query: 449 RKT 457
KT
Sbjct: 137 IKT 139
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 42.7 bits (96), Expect = 0.008
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +2
Query: 308 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 487
+LT D LR +V++ + +EA+I V TTD Y +RV + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKA 133
Query: 488 IRKKMCESLHATS 526
IR+ M + +HA +
Sbjct: 134 IRRVMIDKVHAAA 146
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 42.3 bits (95), Expect = 0.011
Identities = 29/78 (37%), Positives = 41/78 (52%)
Frame = +2
Query: 269 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 448
V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT
Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT------- 118
Query: 449 RKTCYAQHTQVRAIRKKM 502
T A+ +Q RAIRK+M
Sbjct: 119 --TRRAKTSQQRAIRKEM 134
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 40.7 bits (91), Expect = 0.033
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +2
Query: 263 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 433
E + G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K
Sbjct: 70 EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK 126
Score = 37.5 bits (83), Expect = 0.31
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +3
Query: 54 VDPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 221
VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGD 57
Score = 32.7 bits (71), Expect = 8.8
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 544 EVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
E +N+++ +A +I K IYPLR V I K +++ RP
Sbjct: 155 EFINEVVTGKVASEIYKNTKNIYPLRRVEIGKSELVYRP 193
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 39.9 bits (89), Expect = 0.058
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 146 PGNE--NCFGRIEGKSFRSFPG*STS*H*RGKVFPQIQIIAEYVQGRNVLCNFHGMDLTT 319
P N+ N GRI S R T+ H K ++ + V G N F G D T
Sbjct: 42 PANDPANLIGRISEISLRDL----TNEH--SKHMTRMYFKVDGVSGNNATSQFVGHDTTR 95
Query: 320 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 457
+ L+ V++ ++ I A ++V+T DG+ +RV + T + KT
Sbjct: 96 EYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 39.1 bits (87), Expect = 0.10
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 51 IVDPFTRKDWYDVKAPSMFSKXQVGTT 131
++D F++KDWYDVKA +MF+ +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 38.7 bits (86), Expect = 0.13
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 269 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLS 445
V G N F +LT + L + ++ + IE +DV T DGY LRV + FT + S
Sbjct: 76 VAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVRRCKTS 135
Query: 446 QRKTCYAQHTQV 481
Q++ A Q+
Sbjct: 136 QKRAIRAIMRQI 147
>UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1;
Desulfovibrio desulfuricans G20|Rep: Putative
uncharacterized protein - Desulfovibrio desulfuricans
(strain G20)
Length = 351
Score = 38.3 bits (85), Expect = 0.18
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3
Query: 561 QLVHHLPEFRVSDVACNDSHIFFLIALT*VCWA*HVLRWLKESLLVKPMQKT 406
+L+H + S AC D + FF+ LT + A H +RWL+E+ ++ +Q T
Sbjct: 117 RLLHRWRNGKASVTACLDDYAFFIAGLTALYEATHEVRWLREAAALQQVQDT 168
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 37.1 bits (82), Expect = 0.41
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +2
Query: 269 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 448
V+G F G +L D +R + ++ + + +V T DGY LRV + FT + +
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTS 129
Query: 449 RKTCYAQHTQVRAIRKKMCES 511
+K+ + Q + +K ES
Sbjct: 130 QKSAIRKVMQ-EIVEQKARES 149
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 36.7 bits (81), Expect = 0.54
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 272 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 427
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 35.9 bits (79), Expect = 0.95
Identities = 28/94 (29%), Positives = 50/94 (53%)
Frame = +2
Query: 152 NENCFGRIEGKSFRSFPG*STS*H*RGKVFPQIQIIAEYVQGRNVLCNFHGMDLTTDKLR 331
+E+ GRI + + F G T H V + ++ +E V G++ L F G T+ +R
Sbjct: 51 DEHIIGRIYEMTQQEFNGDFTKMH----VMLRFRV-SETV-GQDALTTFVGHHHQTNHIR 104
Query: 332 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 433
+++++ I+ IDV T DGY++R+ + T K
Sbjct: 105 RQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 34.7 bits (76), Expect = 2.2
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = +2
Query: 308 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 487
+LT D LR +V++ + +EA I V TTD Y +++ + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKA 133
Query: 488 IRKKMCESLHATS 526
IR+ M + + T+
Sbjct: 134 IRRTMIDLVRETA 146
>UniRef50_UPI00015B58EF Cluster: PREDICTED: similar to Chm protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to Chm
protein - Nasonia vitripennis
Length = 593
Score = 33.5 bits (73), Expect = 5.1
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +2
Query: 329 RWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC- 505
R +++ + +E D DGY + F + + N +L+ Y A K C
Sbjct: 218 RMLMQLLTSCLEQGADSPEFDGYRDKTF-VEYLNTKNLTPIVKHYVMQAIAMATDKTSCR 276
Query: 506 ESLHATSLTLNS-GRW*TS*FLTPLPRTSRRPAMASTLCAMF 628
+ ++ T LNS GR+ + FL P+ + P LCA+F
Sbjct: 277 DGVNRTKHFLNSLGRYGNTPFLWPMYGSGELPQCFCRLCAVF 318
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.5 bits (73), Expect = 5.1
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +2
Query: 233 KVFPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 412
K++ QI ++E + F + + + LR +V++ + + +DVKT+DGYV R+
Sbjct: 65 KIYFQIDKVSE----ESATSIFKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLK 120
Query: 413 CIGFTNKDSLSQRK 454
+ T + + +K
Sbjct: 121 VLALTYRHLNTSKK 134
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 8.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 306 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 431
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,161,651
Number of Sequences: 1657284
Number of extensions: 14551350
Number of successful extensions: 41325
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 39793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41317
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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