Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00029
(695 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 141 9e-34
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 141 9e-34
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 141 9e-34
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 141 9e-34
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 136 3e-32
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 109 5e-24
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 141 bits (341), Expect = 9e-34
Identities = 65/90 (72%), Positives = 74/90 (82%)
Frame = +2
Query: 239 FPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 418
F + ++IAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 419 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 508
GFT KD SQRKTCYAQ +QVR IR +M +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTD 173
Score = 116 bits (278), Expect = 4e-26
Identities = 53/68 (77%), Positives = 59/68 (86%)
Frame = +3
Query: 51 IVDPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 230
+VDPF+RKDWYDVKAP+MF Q+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 231 ERSFRKFR 254
ERSFRKFR
Sbjct: 81 ERSFRKFR 88
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 141 bits (341), Expect = 9e-34
Identities = 65/90 (72%), Positives = 74/90 (82%)
Frame = +2
Query: 239 FPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 418
F + ++IAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 419 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 508
GFT KD SQRKTCYAQ +QVR IR +M +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTD 173
Score = 116 bits (278), Expect = 4e-26
Identities = 53/68 (77%), Positives = 59/68 (86%)
Frame = +3
Query: 51 IVDPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 230
+VDPF+RKDWYDVKAP+MF Q+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 231 ERSFRKFR 254
ERSFRKFR
Sbjct: 81 ERSFRKFR 88
Score = 73.7 bits (173), Expect = 2e-13
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +1
Query: 508 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+P
Sbjct: 174 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 224
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 141 bits (341), Expect = 9e-34
Identities = 65/90 (72%), Positives = 74/90 (82%)
Frame = +2
Query: 239 FPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 418
F + ++IAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 34 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 93
Query: 419 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 508
GFT KD SQRKTCYAQ +QVR IR +M +
Sbjct: 94 GFTAKDQQSQRKTCYAQQSQVRKIRARMTD 123
Score = 73.7 bits (173), Expect = 2e-13
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +1
Query: 508 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+P
Sbjct: 124 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 174
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +3
Query: 180 GRVFEVSLADLQADTDAERSFRKFR 254
GRVFEVSLADLQ D D ERSFRKFR
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFR 38
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 141 bits (341), Expect = 9e-34
Identities = 65/90 (72%), Positives = 74/90 (82%)
Frame = +2
Query: 239 FPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 418
F + ++IAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 419 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 508
GFT KD SQRKTCYAQ +QVR IR +M +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTD 173
Score = 116 bits (278), Expect = 4e-26
Identities = 53/68 (77%), Positives = 59/68 (86%)
Frame = +3
Query: 51 IVDPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 230
+VDPF+RKDWYDVKAP+MF Q+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 231 ERSFRKFR 254
ERSFRKFR
Sbjct: 81 ERSFRKFR 88
Score = 73.7 bits (173), Expect = 2e-13
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +1
Query: 508 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+P
Sbjct: 174 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 224
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 136 bits (329), Expect = 3e-32
Identities = 63/85 (74%), Positives = 70/85 (82%)
Frame = +2
Query: 239 FPQIQIIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 418
F + ++IAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 85 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 144
Query: 419 GFTNKDSLSQRKTCYAQHTQVRAIR 493
GFT KD SQRKTCYA +QVR IR
Sbjct: 145 GFTAKDQQSQRKTCYAHESQVRKIR 169
Score = 106 bits (254), Expect = 3e-23
Identities = 50/69 (72%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 IVDPFTRKDWYDVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADTD 227
+VDPF+RKDWYDVKAP+MF Q+G TLVNRTQG +IAS+ KGRVFEVSL DLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80
Query: 228 AERSFRKFR 254
E SFRKFR
Sbjct: 81 PEHSFRKFR 89
Score = 73.7 bits (173), Expect = 2e-13
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +1
Query: 508 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+P
Sbjct: 176 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 226
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 109 bits (261), Expect = 5e-24
Identities = 50/68 (73%), Positives = 56/68 (82%)
Frame = +2
Query: 305 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 484
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 485 AIRKKMCE 508
IR +M +
Sbjct: 61 KIRARMTD 68
Score = 73.7 bits (173), Expect = 2e-13
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +1
Query: 508 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 660
IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+P
Sbjct: 69 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 119
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,798,046
Number of Sequences: 53049
Number of extensions: 693576
Number of successful extensions: 2006
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2005
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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