Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00027
(706 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 64 8e-11
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 64 1e-10
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 64 1e-10
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 48 1e-05
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 39 0.003
07_01_0542 + 4002542-4003119,4004347-4004404,4004518-4004835,400... 30 2.1
12_02_0727 - 22564183-22564815,22564906-22565073,22565264-225653... 29 3.6
07_01_0708 - 5339478-5339867 29 4.8
02_05_0142 - 26227792-26228346,26228486-26228608,26229824-262300... 29 4.8
01_06_1477 + 37645143-37647425 29 4.8
01_06_0058 - 26056334-26056630,26057063-26057365,26057748-260578... 29 4.8
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 28 6.3
07_01_1067 + 9437996-9438093,9438368-9438419,9440437-9440511,944... 28 6.3
08_01_0087 + 630355-630403,630502-630699,631858-631943,632238-63... 28 8.3
07_03_1460 - 26687630-26688310 28 8.3
04_01_0418 - 5531652-5531827,5535111-5535195,5535250-5535402,553... 28 8.3
02_05_0235 - 27068516-27069032,27069697-27069788,27070056-270702... 28 8.3
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 64.5 bits (150), Expect = 8e-11
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +2
Query: 236 SEGHRKIYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAISTLAWTTSSGAQ 415
+ + K + GDSYIIL+TT+ +L DIHYWIG++++QDESG AAI T+ + G +
Sbjct: 67 ASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDESGTAAILTVELDAALGGR 126
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +1
Query: 385 VGLDDKFGGTAVQHRETMGHESALFLSYFQTPLTYLEGG 501
V LD GG AVQ+RE G+E+ FLSYF+ + GG
Sbjct: 117 VELDAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGG 155
Score = 36.7 bits (81), Expect = 0.018
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 183 TAGVQIWRIQNFEPIPVAQKDIGK 254
T G++IWRI+NF+P+P+ GK
Sbjct: 49 TGGLEIWRIENFKPVPIPASSYGK 72
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = +2
Query: 239 EGHRKIYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAISTLAWTTSSGAQ 415
E H + + GDSY+IL+TT+ + DIHYW+G++++QDE+G AAI T+ + G +
Sbjct: 94 ESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGR 152
Score = 42.7 bits (96), Expect = 3e-04
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 7/180 (3%)
Frame = +3
Query: 186 AGVQIWRIQNFEPIPVAQKDIGK-----STKEIHTSFYGRPRTVATIYHGISTTGSVGSR 350
+G++IWRI+ + +PV ++ G+ S + T+ I++ + S
Sbjct: 76 SGLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEA 135
Query: 351 RKTSQEPPQFQR-WPGRQVRGHSGPAPRDHGSRKCFVPIIFPDTLDLFGGRESVGFNHVV 527
+ + + GR V+ F P I P+ GG S GF H
Sbjct: 136 GTAAIKTVELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEE----GGIAS-GFRHTE 190
Query: 528 TNAGAQ-KRMFQVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLK 704
N R+F +GK V V++V +S+N D F+L + I+ F G + E+ K
Sbjct: 191 INEREHVTRLFVCRGKHTVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAK 250
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 385 VGLDDKFGGTAVQHRETMGHESALFLSYFQTPLTYLEGG 501
V LD GG AVQ+RE G+E+ FLSYF+ + EGG
Sbjct: 143 VELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEEGG 181
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Frame = +3
Query: 480 LDLFGGRESVGFNHVVTNAGAQK--------RMFQVKGK--RDVRVRQVDPQIASMNKGD 629
L +F G S G+ V+ G + +F+V+G +++ QVD S+N
Sbjct: 548 LVIFKGGVSTGYKKFVSENGIEDDTYSENGVALFRVQGSGPENMQAIQVDTAATSLNSSY 607
Query: 630 CFVLSLDNDIYVFVGEKAKNVEK 698
C+VL + ++ ++G + ++++
Sbjct: 608 CYVLHDGDTLFTWIGNLSSSMDQ 630
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +2
Query: 236 SEGHRKIYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAISTLAWTTSSGAQ 415
+ H K Y GDSYIIL+TT+ + D+HYW+G++++QDE+G AAI T+ + G +
Sbjct: 54 TSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEAGTAAILTVELDAALGGR 113
Score = 47.2 bits (107), Expect = 1e-05
Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 7/180 (3%)
Frame = +3
Query: 186 AGVQIWRIQNFEPIPVAQKDIGK-----STKEIHTSFYGRPRTVATIYHGISTTGSVGSR 350
+G+++WRI+NF+P+PV GK S + T+ +++ + S
Sbjct: 37 SGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEA 96
Query: 351 RKTSQEPPQFQR-WPGRQVRGHSGPAPRDHGSRKCFVPIIFPDTLDLFGGRESVGFNHVV 527
+ + GR V+ F P I P GG S GFNHV
Sbjct: 97 GTAAILTVELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQP----GGVAS-GFNHVE 151
Query: 528 TNAGAQ-KRMFQVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLK 704
N R++ +GK V V++V +S+N D F+L N I+ F G + E+ K
Sbjct: 152 VNQQDHVTRLYVCQGKHVVHVKEVPFVRSSLNHEDIFILDTANKIFQFNGSNSCIQERAK 211
Score = 35.1 bits (77), Expect = 0.055
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1
Query: 385 VGLDDKFGGTAVQHRETMGHESALFLSYFQTPLTYLEGG 501
V LD GG AVQ+RE G E+ LSYF+ + GG
Sbjct: 104 VELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGG 142
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +3
Query: 558 QVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVE 695
Q G +++ QVD +S+N C++L N ++ + G +++
Sbjct: 540 QGSGSENMQAIQVDAVSSSLNSSYCYILHNGNTVFTWTGNLTTSLD 585
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = +1
Query: 385 VGLDDKFGGTAVQHRETMGHESALFLSYFQTPLTYLEGGNPSVLTT 522
V LD GG AVQHRE G+ES FLSYF+ + LEGG S T
Sbjct: 90 VELDTMLGGRAVQHRELQGYESDKFLSYFKPCIIPLEGGFASGFKT 135
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 278 ILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAISTLAWTTSSGAQ 415
I T S +DIH+WIG++S+QDE+G AAI T+ T G +
Sbjct: 54 ITTTCSKGGGAYLFDIHFWIGKDSSQDEAGTAAIKTVELDTMLGGR 99
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +3
Query: 543 QKRMFQVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLK 704
+ R++ KGKR +RV++V +S+N D F+L + IY F G + E+ K
Sbjct: 142 ETRLYICKGKRAIRVKEVPFARSSLNHDDVFILDTEKKIYQFNGANSNIQERAK 195
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 251 KIYKGDSYIILRTTSDSRNNLSWDIHYWIGRES-TQDESGAAAISTLAWTTSSG 409
K Y GD YI+L T + + YWIG++S +D+ A + W + G
Sbjct: 420 KFYSGDCYIVLYTYHSGDKREEFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKG 473
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 245 HRKIYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAISTLAWTTSSGA 412
H K Y G++YIIL T ++HYW+G E+ +++ A+ + + G+
Sbjct: 35 HGKFYTGNTYIILSTVELKSGVRQHNVHYWVGEEAKEEDCLTASDKAIELDVALGS 90
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 385 VGLDDKFGGTAVQHRETMGHESALFLSYFQTPLTYLEG 498
+ LD G VQ+RET G ES FLSYF+ + ++G
Sbjct: 82 IELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQG 119
>07_01_0542 + 4002542-4003119,4004347-4004404,4004518-4004835,
4005201-4005446,4005550-4005648,4005912-4006097,
4006204-4006401,4006521-4006596,4006721-4007637
Length = 891
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/77 (28%), Positives = 29/77 (37%)
Frame = +3
Query: 312 YHGISTTGSVGSRRKTSQEPPQFQRWPGRQVRGHSGPAPRDHGSRKCFVPIIFPDTLDLF 491
Y G G + R+ S P R G +DH S+ F+P L+L
Sbjct: 787 YRGGGGGGGAAAERERSSSSPPLVRVAISCPESRGG---KDHSSKLVFMPETLRGLLELG 843
Query: 492 GGRESVGFNHVVTNAGA 542
R V VVT+ GA
Sbjct: 844 AARFGVSPTRVVTSGGA 860
>12_02_0727 -
22564183-22564815,22564906-22565073,22565264-22565382,
22565796-22565898,22566702-22566974,22567088-22567279,
22568289-22568615
Length = 604
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -1
Query: 613 EAICGSTCLTRTSRFPLTWNIRFWAPAFVTTWLKPTDSLPPNRSRVSGNMIGTKHFRDPW 434
E + STCL +TW++ F+TT + D L P+ +VS + T+ W
Sbjct: 286 EKLSSSTCLAFGPAACMTWDLAESGKDFITTIVNRND-LVPSFGKVSAAKLRTEVMASSW 344
>07_01_0708 - 5339478-5339867
Length = 129
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 348 RRKTSQEPPQFQRWPGRQVRGHSGPAPRDHGSR 446
RR+ PP+ ++ GR+ +G P PR HG R
Sbjct: 85 RRQEEPRPPRTRKRSGRRAKGDGIPPPR-HGRR 116
>02_05_0142 -
26227792-26228346,26228486-26228608,26229824-26230084,
26230658-26231116
Length = 465
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 344 ESTQDESGAAAISTLAWTTSSGAQRSSTERP 436
+ST+D S AAA W+ SSG+ S+ P
Sbjct: 55 QSTEDSSAAAARPAAGWSRSSGSVSSARSIP 85
>01_06_1477 + 37645143-37647425
Length = 760
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -1
Query: 544 WAPAFVTTWLKPTDSLPPNRSRVSGNMIGTKHFRDPWSLGAGPLCP-RTCRPG 389
W+PA + + + T + N R +M H P ++G+G + P R PG
Sbjct: 550 WSPAAIRSAMMTTAATLDNTGRSINDMARAGHAATPLAMGSGHIDPNRAADPG 602
>01_06_0058 -
26056334-26056630,26057063-26057365,26057748-26057891,
26057947-26058702,26058844-26059088,26059177-26060079,
26060163-26060225,26060537-26061025,26061211-26061291,
26061801-26061956,26062371-26062416
Length = 1160
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 158 SGFCQCRQNSRCANMENTELRTNTRCSEGHRKIYKGDSYIILRTTSDSRNNL 313
+G CQC ++ +C N E T T S+G DSY + R +DS++ +
Sbjct: 774 NGRCQCMRDGKCRNNYLREFNTTT--SQGK------DSYPLYRRRNDSKSKV 817
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 420 PAPRDHGSRKCFVPIIFPDTLDLFGGRESVGFNHV 524
P P H + V FPD L L GG + GF+ +
Sbjct: 48 PPPPHHRRARSEVAFRFPDDLGLGGGADGGGFDEI 82
>07_01_1067 +
9437996-9438093,9438368-9438419,9440437-9440511,
9441455-9441523,9443711-9444232
Length = 271
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +3
Query: 288 RPRTVATIYHGISTTGSVGSRRKTSQEPPQFQRWPGRQVR-----GHSGPAPRDHGSRKC 452
+PR + H +S T + + + ++ PPQ +R ++R SG R GSR
Sbjct: 130 QPRRLHGAVHLLSATPAEDAEERPTRRPPQAERRESAKLRINRALNQSGSVGRAFGSRFG 189
Query: 453 FVPIIFPDT 479
V ++F T
Sbjct: 190 IVVMLFTRT 198
>08_01_0087 +
630355-630403,630502-630699,631858-631943,632238-632946,
633029-633194,633459-633934,634023-634873,635078-635987,
636597-636784
Length = 1210
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +2
Query: 158 SGFCQCRQNSRCANMENTELRTNTRCSEGHRKIYKGDSYIILRTTSDSRNNLSWDIHYWI 337
+G CQC ++ +C N N N S+G DSY + R +D ++ + + W+
Sbjct: 802 NGKCQCMRDGKCRN--NYPREFNPTTSQGK------DSYPLYRRRNDGKSRMRYRDARWV 853
>07_03_1460 - 26687630-26688310
Length = 226
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 489 FGGRESVGFNHVVTNAGAQKRMFQVKGKRDVRVRQVD 599
FGG +VG N V A R+F +G+R V R+ D
Sbjct: 98 FGGNGAVGGNEWVVEALRGARVFIAEGERSVWRRKTD 134
>04_01_0418 -
5531652-5531827,5535111-5535195,5535250-5535402,
5535516-5535632,5536136-5536363
Length = 252
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 558 QVKGKRDVRVRQVDPQIASMNKGDCFVLS 644
+VKG++D R QI + GDC+++S
Sbjct: 125 KVKGEKDEVYRGASTQILGVAVGDCYIMS 153
>02_05_0235 - 27068516-27069032,27069697-27069788,27070056-27070289,
27071569-27071676,27071796-27071855,27072368-27072443,
27072550-27072710,27076919-27076981,27077061-27077148,
27077568-27078308,27078406-27079033,27079314-27079368,
27082073-27083527
Length = 1425
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 372 PQFQRWPGRQVRG-HSGPAPRDHGSRKCFVP-IIFPDTLDLFGGRESVGFNH 521
PQF R V H P P +H S+K F + LDL G +G NH
Sbjct: 1372 PQFGRMGHVSVWNLHDKPLPSEHASQKGFEDRVKLKPPLDLRSGPPHLGCNH 1423
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,121,691
Number of Sequences: 37544
Number of extensions: 512072
Number of successful extensions: 1561
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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