Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00026
         (728 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical ...    96   3e-20
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical...    29   3.4  
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a...    28   7.9  

>AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical
           protein Y59A8B.6 protein.
          Length = 968

 Score = 95.9 bits (228), Expect = 3e-20
 Identities = 42/73 (57%), Positives = 57/73 (78%)
 Frame = +2

Query: 509 KGCEVNPSSEELWLEAARLQPIDTARAVIAHAARNLPHSVRIWVKAADLEQEAKAKRRVF 688
           +GCE   +SEELWL A RL P +  R+++A+A R+ PHSVR+W KA+DLEQ+ K K++V 
Sbjct: 360 EGCEKIKNSEELWLHAIRLHPPELGRSIVANAVRSCPHSVRLWCKASDLEQDLKDKKKVL 419

Query: 689 RKALEHIPNSVRL 727
           RKALE IP+SV+L
Sbjct: 420 RKALEQIPSSVKL 432



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 26/68 (38%), Positives = 34/68 (50%)
 Frame = +2

Query: 509 KGCEVNPSSEELWLEAARLQPIDTARAVIAHAARNLPHSVRIWVKAADLEQEAKAKRRVF 688
           K  E  PSS +LW  A  L+  + AR ++  A      S  +W+  A LE    A R+V 
Sbjct: 421 KALEQIPSSVKLWKAAVELEDPEDARILLTRAVECCSSSTEMWLALARLETYENA-RKVL 479

Query: 689 RKALEHIP 712
            KA EHIP
Sbjct: 480 NKAREHIP 487



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 23/73 (31%), Positives = 40/73 (54%)
 Frame = +2

Query: 509 KGCEVNPSSEELWLEAARLQPIDTARAVIAHAARNLPHSVRIWVKAADLEQEAKAKRRVF 688
           +  E   SS E+WL  ARL+  + AR V+  A  ++P    IW+ AA LE E + ++ + 
Sbjct: 451 RAVECCSSSTEMWLALARLETYENARKVLNKAREHIPTDRHIWLSAARLE-ETRGQKDMV 509

Query: 689 RKALEHIPNSVRL 727
            K +    +S+++
Sbjct: 510 DKIVAKAMSSLKV 522



 Score = 37.9 bits (84), Expect = 0.007
 Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 9/48 (18%)
 Frame = +3

Query: 414 KATMLIKEV---------SWIASARLEEVTGKVQTARNLIIRDVKSIR 530
           KA ML+K V         +W+ASA LEE  GK+QTARN I+   + I+
Sbjct: 319 KARMLLKSVRETNPRHPPAWVASAVLEEQAGKLQTARNFIMEGCEKIK 366



 Score = 31.5 bits (68), Expect = 0.64
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
 Frame = +2

Query: 509 KGCEVNPSSEELWLEAARL----QPIDTARAVIAHAARNLPH-SVRIWVKAADLEQEA-- 667
           K CE  P  E+ WL  A+L    + +  AR  +  A     H S +IW+ A  +E E   
Sbjct: 625 KACETVPEVEDYWLMLAKLRFVNKRVGEARDTLMSAFEKHGHQSEKIWLAATKIEIETDQ 684

Query: 668 -KAKRRVFRKALEHIPNS 718
               R +F KA    P++
Sbjct: 685 FDTARGLFGKARAKAPSA 702



 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
 Frame = +2

Query: 524  NPSSEELWLEAARLQP----IDTARAVIAHAARNLPHSVRIWVKAADLE--QEAKAKRRV 685
            NP +++LWLE+ R +      + A+  ++ A +    S ++W +A  +E     +AK   
Sbjct: 800  NPKNDDLWLESVRFEQRVGCPEMAKERMSRALQECEGSGKLWAEAIWMEGPHGRRAKSID 859

Query: 686  FRKALEHIPN 715
              K  EH P+
Sbjct: 860  ALKKCEHNPH 869


>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
           protein Y45F10B.10 protein.
          Length = 1592

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 163 YHGSSSQL*HNAAGH*ISVVCLCSSGCAS 249
           YH +S QL     GH  +V CLCSS  +S
Sbjct: 896 YHIASEQLIGTFKGHTAAVTCLCSSNDSS 924


>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
            assigned gene nameprotein 192 protein.
          Length = 2957

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 500  SHNKGCEVNPSSEELWLEAARLQPIDTARAVIAHAARNL 616
            SHNKG +++    E W + A    +D  +A      R L
Sbjct: 1735 SHNKGDDIDIDDPEFWTKWAEKAQVDVEKATATPDGREL 1773


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,898,455
Number of Sequences: 27780
Number of extensions: 287016
Number of successful extensions: 646
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)