Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00025
(721 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16819| Best HMM Match : BIR (HMM E-Value=7.5e-30) 62 4e-10
SB_12329| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_39662| Best HMM Match : BIR (HMM E-Value=1.2e-19) 52 4e-07
SB_31352| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_28819| Best HMM Match : BIR (HMM E-Value=2.6e-32) 42 7e-04
SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09) 40 0.002
SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_12327| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_14518| Best HMM Match : MIB_HERC2 (HMM E-Value=2.4e-38) 36 0.033
SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0) 33 0.18
SB_3322| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11) 31 0.94
SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 30 1.6
SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012) 30 2.2
SB_50584| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 29 2.9
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 29 3.8
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 29 3.8
SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14) 29 3.8
SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027) 29 5.0
SB_41371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_40870| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_43507| Best HMM Match : DUF35 (HMM E-Value=7.6) 28 8.8
SB_11394| Best HMM Match : GntR (HMM E-Value=7.9) 28 8.8
SB_45116| Best HMM Match : EGF (HMM E-Value=0) 28 8.8
>SB_16819| Best HMM Match : BIR (HMM E-Value=7.5e-30)
Length = 514
Score = 62.1 bits (144), Expect = 4e-10
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +2
Query: 113 KPEELAEAGFFYTGQGDKTKCFYCDGGLKDWESDDVPWEQHARW 244
+P EL+ AGF+Y G D KC+ C L++WE DD+PW +H +W
Sbjct: 148 RPWELSSAGFYYLGDQDSVKCYKCGVALRNWEPDDLPWVEHEKW 191
Score = 44.4 bits (100), Expect = 9e-05
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 376 QEGEKHLDDSKICKICYSEERNVCFVPCGHVVACAKCALSTDKC 507
Q+ + + + ++CKIC E + F+PCGH+ C CA + C
Sbjct: 461 QQKLERMQEERLCKICMDAEVGIVFLPCGHLSCCPGCAEGMELC 504
>SB_12329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 53.6 bits (123), Expect = 2e-07
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +1
Query: 352 NDSTNNVAQEGEKHLDDSKICKICYSEERNVCFVPCGHVVACAKCALSTDKCRCVAG 522
N S++ QE L+D CK+C E+ N +PCGH+V C +CA++ + C G
Sbjct: 126 NASSDYSLQEKLSKLEDGLRCKVCMDEQINAVLIPCGHMVCCEQCAMNLEACPVCRG 182
>SB_39662| Best HMM Match : BIR (HMM E-Value=1.2e-19)
Length = 314
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +2
Query: 122 ELAEAGFFYTGQGDKTKCFYCDGGLKDWESDDVPWEQHARWF 247
ELA AGF +TG+ D +CF C G LK W+ DD P E H ++
Sbjct: 155 ELARAGFVFTGRDDVVECFKCKGTLKQWKVDDRPIESHREFY 196
>SB_31352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 49.6 bits (113), Expect = 3e-06
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 391 HLDDSKICKICYSEERNVCFVPCGHVVACAKCALSTDKC 507
HL D++IC+IC E F PCGHVV C +C+ +C
Sbjct: 345 HLQDARICQICMDVEVATAFCPCGHVVCCVECSALCKEC 383
>SB_28819| Best HMM Match : BIR (HMM E-Value=2.6e-32)
Length = 141
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +2
Query: 104 CAXKPEELAEAGFFYTGQGDK---TKCFYCDGGLKDWESDDVPWEQHAR 241
C E++A AGF++ D +CF C L WE +D PW++H +
Sbjct: 30 CKCTAEKMAAAGFYHCETDDDPDVARCFVCFKELDGWEPEDDPWQEHKK 78
>SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09)
Length = 474
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 412 CKICYSEERNVCFVPCGHVVACAKCALSTDKC 507
C+IC E N F PCGHV C CA + C
Sbjct: 406 CQICMDAEVNTAFCPCGHVYCCQTCASNLYYC 437
Score = 32.7 bits (71), Expect = 0.31
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 412 CKICYSEERNVCFVPCGHVVACAKCALSTDKC 507
C C + + F PCGH++ C++CA + C
Sbjct: 349 CSKCNVNDCDTLFCPCGHLMFCSRCADNMKFC 380
>SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 412 CKICYSEERNVCFVPCGHVVACAKCALSTDKCRCVAG 522
C IC +RNV + CGHV +C CA +C G
Sbjct: 538 CVICLENQRNVVLLNCGHVCSCRTCAQQIHQCPVCRG 574
>SB_12327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 38.7 bits (86), Expect = 0.005
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 394 LDDSKICKICYSEERNVCFVPCGHVVACAKCALSTDKC 507
L + CK+C +N ++PC H AC +CAL + C
Sbjct: 11 LKSAMCCKVCEKRWKNSTYLPCLHTEACIECALKSMTC 48
>SB_14518| Best HMM Match : MIB_HERC2 (HMM E-Value=2.4e-38)
Length = 742
Score = 35.9 bits (79), Expect = 0.033
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 412 CKICYSEERNVCFVPCGHVVACAKCALSTDKC 507
C +C ++ + F PC H+VAC C KC
Sbjct: 625 CMVCSEKKSQLLFKPCNHMVACEGCGSLMKKC 656
>SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0)
Length = 636
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 421 CYSEERNVC-FVPCGHVVACAKCALSTDKC-RCVAGRSRMRCGSTS 552
C ++ C F+PCGH + C +C KC +C ++C S+S
Sbjct: 449 CLCDKSVDCKFMPCGHSIVCYECGNMFKKCYKCKVDVESIQCVSSS 494
>SB_3322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 777
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 397 DDSKI-CKICYSEERNVCFVPCGHVVACAKCA 489
DD+ + C IC S+ R+ +PC H+ C CA
Sbjct: 243 DDNVLECVICMSDFRDTLILPCRHLCLCKACA 274
>SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11)
Length = 439
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = +1
Query: 445 CFVPCGHVVACAKCALSTDKCRCVAGRSRMRCGSTSRERTLLASCILVTSPGGPEAC 615
C VPC H +C + DKC C S CG T S + T GP+ C
Sbjct: 10 CSVPCSH----GRCTTAPDKCECEKYWSGADCG-TYIGTCNNCSSVGGTCSAGPDTC 61
>SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 385 EKHLDDSKICKICYSEERNVCFVPCGHVVACAKC 486
++ +D ++C IC + +V F+PC H V+C C
Sbjct: 421 QESVDVDELCPICCAMRISVRFLPCRH-VSCRSC 453
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 406 KICKICYSEERNVCFVPCGHVVACAKC 486
++CKIC ++V PCGH++ C C
Sbjct: 183 QLCKICAENNKDVRIEPCGHLM-CHLC 208
>SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 406 KICKICYSEERNVCFVPCGHVVACAKC 486
++CKIC ++V PCGH++ C C
Sbjct: 379 QLCKICAENNKDVRIEPCGHLM-CHLC 404
>SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012)
Length = 489
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Frame = +1
Query: 412 CKI-CYSEERNVCFVPCGHVVACAKCALSTDKCR--CVAGRSRMRCG---STSRERTLLA 573
CK+ CY EE C C C ++ C C+ GR MRCG ++ L
Sbjct: 110 CKMECYGEE---CHQTCQSSGCDVTCPAASKVCVQVCITGRCTMRCGRGVGRCEQKCLAG 166
Query: 574 SCILV 588
C ++
Sbjct: 167 KCAMI 171
>SB_50584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = -3
Query: 539 HRIRER---PATHRHLSVDSAHLAHATTWPHGTKHTL 438
H IR P RH + + ++ H T PH T+HT+
Sbjct: 25 HNIRHTITTPHNIRHTTTTTHNIRHTITTPHNTRHTI 61
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 412 CKICYSEERNVCFVPCGHVVACAKCALSTDKCRCV 516
C C C +PCGH V C KC + +CV
Sbjct: 101 CVRCCGILLGPCTLPCGHTV-CEKCLSKSQAKKCV 134
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 370 VAQEGEKHLDDSKICKICYSEERNVCFVPCGHVVACAKCALSTDKCRCVAGRSRMRCGST 549
+A+ + ++ ++C C + N +PC H C++C LS + R GR + C
Sbjct: 1 MAEGFDHYIQPPEVCPKCMNAYENPKVLPCLHTF-CSQC-LSEELHRDCEGRLNVTCPKC 58
Query: 550 SRE 558
R+
Sbjct: 59 LRD 61
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 370 VAQEGEKHLDDSKICKICYSEERNVCFVPCGHVVACAKC 486
+A+ G K L+D C IC + +PC H C C
Sbjct: 1 MAKPGSKQLEDEVTCAICIEHFTDPRLLPCLHTF-CRHC 38
>SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14)
Length = 635
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +1
Query: 457 CGHVVACA---KCALSTDKCRCVAGRSRMRC 540
C V ACA KC++ + +C C+AG C
Sbjct: 257 CAKVCACADTEKCSVVSGECTCIAGSCSSSC 287
>SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027)
Length = 442
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Frame = +1
Query: 412 CKI-CYSEERNVCFVPCGHVVACAKCALSTDKCR--CVAGRSRMRCG---STSRERTLLA 573
CK+ CY +E C C C ++ C C+ GR MRCG ++ L
Sbjct: 110 CKMECYGDE---CHQTCQSSGCDVTCPAASKVCVQVCITGRCTMRCGRGVGRCEQKCLAG 166
Query: 574 SCILV 588
C ++
Sbjct: 167 KCAMI 171
>SB_41371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 454 PCGHVVACAKCALSTDKCRCVAGRSRMRCGST 549
PC + CA + S C+C AG C ST
Sbjct: 254 PCQNNGTCAALSASDYNCKCPAGFGGTECNST 285
>SB_40870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 532 MRCGSTSRERTLLASCILVTSPGGP 606
M CG+ + E + A+CI +PG P
Sbjct: 207 MACGTCANENAIKAACIWYRAPGSP 231
>SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = -3
Query: 653 NHRIRGFVRRLFQHASGPPGEVTSIQLARRVLSREVEPHRIRERPATHRHLSVDSAHLAH 474
+H I + + +H + G VTS Q + SR + R +H+HL S H
Sbjct: 292 SHHISTWCHAVSRHVTSTHG-VTSHQY---LASRHISTWR---HVTSHQHLVSRSVTSYH 344
Query: 473 ATTWPHGTKH 444
+TW H T H
Sbjct: 345 ISTWRHVTSH 354
>SB_43507| Best HMM Match : DUF35 (HMM E-Value=7.6)
Length = 326
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = +1
Query: 394 LDDSKICKICYSEERNVCFVPCGHVVACAK----CALSTDKCRCVAGRSRMRCGSTSRER 561
L D K+ +E R F G + C L K RCV+GRS + S+++ R
Sbjct: 263 LYDRTSSKLTVNEARKQLFAQKGRPLEALPPSKGCTLRAHKARCVSGRSLLGAVSSAKSR 322
>SB_11394| Best HMM Match : GntR (HMM E-Value=7.9)
Length = 451
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +1
Query: 418 ICYSEERNVCF----VPCGHVVACAKCALSTDKCRCVAGRSRMRCGSTSRERTLLASCIL 585
+CYS R VC+ C V C C ++ CR V R+ C S R +SC +
Sbjct: 219 VCYSC-RVVCYSCRVACCSCRVVCYSCRVACCSCRVVCYSCRVACCS-CRVHMKCSSCRV 276
Query: 586 VTS 594
V S
Sbjct: 277 VCS 279
>SB_45116| Best HMM Match : EGF (HMM E-Value=0)
Length = 2023
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +1
Query: 457 CGHVVACA-KCALSTDKCRCVAGRSRMRC 540
C H C C+ T +CRCVAG + C
Sbjct: 132 CVHGGTCEFDCSTLTSRCRCVAGYTGEHC 160
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,566,726
Number of Sequences: 59808
Number of extensions: 473117
Number of successful extensions: 1761
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1747
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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