Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00025
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 39 0.004
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 39 0.004
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 39 0.004
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 39 0.004
AF039047-10|AAB94229.2| 400|Caenorhabditis elegans Hypothetical... 36 0.029
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 35 0.051
Z77654-2|CAB01130.1| 308|Caenorhabditis elegans Hypothetical pr... 33 0.16
U72208-1|AAD00182.1| 308|Caenorhabditis elegans inhibitor of ap... 33 0.16
Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 30 1.9
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr... 29 4.4
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 28 7.7
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 28 7.7
AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical... 28 7.7
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 28 7.7
AF067217-1|AAY55828.1| 191|Caenorhabditis elegans Hypothetical ... 28 7.7
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 406 KICKICYSEERNVCFVPCGHVVACAKC 486
++CKIC E+N+ PCGH++ CAKC
Sbjct: 388 ELCKICDDNEKNIKIEPCGHLL-CAKC 413
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 406 KICKICYSEERNVCFVPCGHVVACAKC 486
++CKIC E+N+ PCGH++ CAKC
Sbjct: 388 ELCKICDDNEKNIKIEPCGHLL-CAKC 413
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 406 KICKICYSEERNVCFVPCGHVVACAKC 486
++CKIC E+N+ PCGH++ CAKC
Sbjct: 371 ELCKICDDNEKNIKIEPCGHLL-CAKC 396
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 406 KICKICYSEERNVCFVPCGHVVACAKC 486
++CKIC E+N+ PCGH++ CAKC
Sbjct: 371 ELCKICDDNEKNIKIEPCGHLL-CAKC 396
>AF039047-10|AAB94229.2| 400|Caenorhabditis elegans Hypothetical
protein K11D12.9 protein.
Length = 400
Score = 35.9 bits (79), Expect = 0.029
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 412 CKICYSEERNVCFVPCGHVVACAKCALSTDKCRCVAGRS 528
C IC + + ++ F+PC H++ C+ C ++D C RS
Sbjct: 352 CCICLATKPSIVFMPCRHLITCSGCYDASDFRECPTCRS 390
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 35.1 bits (77), Expect = 0.051
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 397 DDSKI-CKICYSEERNVCFVPCGHVVACAKCA 489
DDS + C IC S+ R+ +PC H+ C+ CA
Sbjct: 263 DDSGLECIICLSDIRDTVILPCRHLCVCSNCA 294
>Z77654-2|CAB01130.1| 308|Caenorhabditis elegans Hypothetical
protein C50B8.2 protein.
Length = 308
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +2
Query: 119 EELAEAGFF-YTGQGDKT--KCFYCDGGLKDWESDDVPWEQHARWFDRSRTCNW*K 277
++LA+AG+F + DKT KC +C L ESDD PWE+H ++ S +C++ K
Sbjct: 190 KKLAKAGWFSIANKKDKTSAKCPFCLVELDFDESDD-PWEEHQKF---SASCDFIK 241
>U72208-1|AAD00182.1| 308|Caenorhabditis elegans inhibitor of
apoptosis homolog protein.
Length = 308
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +2
Query: 119 EELAEAGFF-YTGQGDKT--KCFYCDGGLKDWESDDVPWEQHARWFDRSRTCNW*K 277
++LA+AG+F + DKT KC +C L ESDD PWE+H ++ S +C++ K
Sbjct: 190 KKLAKAGWFSIANKKDKTSAKCPFCLVELDFDESDD-PWEEHQKF---SASCDFIK 241
>Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical
protein F16A11.1 protein.
Length = 673
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 385 EKHLDDSKICKICYSEERNVCFVPCGHVVACAKCALSTDKC 507
++H+ + C IC++ + +PC H C+ C D C
Sbjct: 556 KEHIPED-YCTICFAAPGSTTLLPCNHDGFCSDCCNMMDHC 595
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 382 GEKHLDDSKICKICYSEERNVCFVPCGHVVACAKCA--LSTDKCRC 513
G + +++ C IC N CGH+ C +C L T K C
Sbjct: 376 GAQEVNEGDECTICMDAPVNSVLYTCGHMCMCFECGRRLLTTKGTC 421
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 382 GEKHLDDSKICKICYSEERNVCFVPCGHVVACAKCA--LSTDKCRC 513
G + +++ C IC N CGH+ C +C L T K C
Sbjct: 556 GAQEVNEGDECTICMDAPVNSVLYTCGHMCMCFECGRRLLTTKGTC 601
>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
ZK1067.2 protein.
Length = 2219
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Frame = +1
Query: 412 CKICYSEERNVCFVPCGHVVAC-----AKCALSTDKCR--CVAGRSRMRCGSTSR 555
C IC++ + ++C C V+ C AKC S C+ C CG+ R
Sbjct: 1775 CGICFTTKTHICQNMCQKVLNCGHTCSAKCGESCPPCKAFCTNKCEHQSCGAGER 1829
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Frame = +1
Query: 421 CYSEERNVCFVPCG---HVVACAKCALSTDK-CRCVAGRSRMRCGS 546
C + C PC H C +C L T K C C + +RCGS
Sbjct: 322 CGGARKFGCPHPCTELCHPGPCIECKLFTTKSCNCGKTKKSVRCGS 367
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 451 VPCGHVVACAKCALSTDKCRC 513
V C H +C C ST CRC
Sbjct: 633 VDCAHKCSCKLCDPSTGSCRC 653
>AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical
protein Y47D3A.22 protein.
Length = 765
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 421 CYSEERNVCFVPCGHVVACAKCALSTDKCRC 513
C + V PCGH VAC C RC
Sbjct: 611 CLNSVATVKLDPCGHRVACVDCTEKVAIRRC 641
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 451 VPCGHVVACAKCALSTDKCRC 513
V C H +C C ST CRC
Sbjct: 633 VDCAHKCSCKLCDPSTGSCRC 653
>AF067217-1|AAY55828.1| 191|Caenorhabditis elegans Hypothetical
protein F56A6.5 protein.
Length = 191
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Frame = +1
Query: 412 CKICYSE----ERNVCFVPCGHVVACAKCALSTDKCRC 513
C ICY E + C CGH + C +C L RC
Sbjct: 6 CSICYDEYDHDTQIPCIGTCGHTI-CDRCRLQLLNKRC 42
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,044,369
Number of Sequences: 27780
Number of extensions: 335305
Number of successful extensions: 979
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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