Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00020
(703 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 144 2e-33
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 130 2e-29
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 127 2e-28
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 118 1e-25
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 107 2e-22
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 103 4e-21
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 102 1e-20
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 99 5e-20
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 93 6e-18
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 91 2e-17
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 89 1e-16
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 88 2e-16
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 75 1e-12
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 73 5e-12
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 71 3e-11
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 70 6e-11
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 70 6e-11
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 53 6e-06
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 53 6e-06
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 50 4e-05
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 46 7e-04
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 46 0.001
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 45 0.002
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.011
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 41 0.034
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 41 0.034
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 40 0.078
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 39 0.14
UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.18
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 38 0.32
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 37 0.55
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 36 0.73
UniRef50_A4S2V3 Cluster: Predicted protein; n=1; Ostreococcus lu... 34 2.9
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 34 2.9
UniRef50_Q5K9I9 Cluster: Putative uncharacterized protein; n=2; ... 33 5.1
UniRef50_Q09743 Cluster: Protein ste16; n=1; Schizosaccharomyces... 33 5.1
UniRef50_P82984 Cluster: Putative odorant receptor 65c; n=2; Dro... 33 5.1
UniRef50_Q7PR93 Cluster: ENSANGP00000010616; n=1; Anopheles gamb... 33 6.8
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 6.8
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 9.0
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 33 9.0
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 144 bits (349), Expect = 2e-33
Identities = 65/88 (73%), Positives = 77/88 (87%)
Frame = +3
Query: 243 FPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 422
F + +L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCI
Sbjct: 84 FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCI 143
Query: 423 GFTNKDSLSQRKTCYAQHTQVRAIRKKM 506
GFT KDS+SQRKTCYAQH+Q++ IR KM
Sbjct: 144 GFTIKDSMSQRKTCYAQHSQIKNIRAKM 171
Score = 123 bits (297), Expect = 4e-27
Identities = 57/66 (86%), Positives = 61/66 (92%)
Frame = +1
Query: 55 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 234
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80
Query: 235 ERSFRK 252
ERSFRK
Sbjct: 81 ERSFRK 86
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 595 EGCHGIYPLRDVCNPKVKVLKRPRFEISKLMELHGE 702
+ C +YPL DV KVKVLK+PRF++S LMELHG+
Sbjct: 202 KACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGD 237
Score = 46.0 bits (104), Expect = 9e-04
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +2
Query: 512 IITRDVTNSELREVVNKLIPDSIAKDIEKAAMASTLCAMFAIRK*KC*RGP 664
II R++T+++L+ VV KL+PDSIAKDIEKA IRK K + P
Sbjct: 174 IIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKP 224
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 130 bits (315), Expect = 2e-29
Identities = 60/88 (68%), Positives = 71/88 (80%)
Frame = +3
Query: 243 FPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 422
F + +LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 423 GFTNKDSLSQRKTCYAQHTQVRAIRKKM 506
GFT K + RKT YAQH QVR IRKKM
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKM 168
Score = 105 bits (251), Expect = 1e-21
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 55 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 234
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 235 ERSFR 249
R F+
Sbjct: 81 FRKFK 85
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +1
Query: 595 EGCHGIYPLRDVCNPKVKVLKRPRFEISKLMELHGE 702
+ C IYPL DV KVK+LK+P+FE+ KLMELHGE
Sbjct: 199 KACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = +2
Query: 494 QKENVEIITRDVTNSELREVVNKLIPDSIAKDIEKAAMA 610
+K+ +EI+TR+V ++L+EVVNKLIPDSI KDIEKA +
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQS 203
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 127 bits (307), Expect = 2e-28
Identities = 59/90 (65%), Positives = 71/90 (78%)
Frame = +3
Query: 237 KVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 416
+ + +IRL AE VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+F
Sbjct: 474 QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLF 533
Query: 417 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKM 506
CI FT K +KTCYAQ +Q+R IR+KM
Sbjct: 534 CIAFTKKRVNQNKKTCYAQSSQIRQIRRKM 563
Score = 101 bits (242), Expect = 2e-20
Identities = 47/65 (72%), Positives = 56/65 (86%)
Frame = +1
Query: 61 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 240
DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED--Q 474
Query: 241 SFRKL 255
++RK+
Sbjct: 475 AYRKI 479
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/31 (58%), Positives = 26/31 (83%)
Frame = +1
Query: 610 IYPLRDVCNPKVKVLKRPRFEISKLMELHGE 702
IYPL++V KVK+LK P+F++ KLME+HG+
Sbjct: 599 IYPLQNVYIRKVKILKAPKFDLGKLMEVHGD 629
Score = 39.9 bits (89), Expect = 0.059
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 473 AHSGQSNQ--KENVEIITRDVTNSELREVVNKLIPDSIAKDIEKAAMASTLCAMFAIRK* 646
A S Q Q ++ EI+T T+ +L+E+V K IP+SI ++IEKA + IRK
Sbjct: 551 AQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKV 610
Query: 647 KC*RGP 664
K + P
Sbjct: 611 KILKAP 616
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 118 bits (284), Expect = 1e-25
Identities = 56/90 (62%), Positives = 71/90 (78%)
Frame = +3
Query: 237 KVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 416
+VF +I+L AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF
Sbjct: 78 QVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVF 137
Query: 417 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKM 506
I FT K ++KT YA+ ++V+AIRKKM
Sbjct: 138 AICFTKKGESQKKKTSYAKTSRVKAIRKKM 167
Score = 84.6 bits (200), Expect = 2e-15
Identities = 43/70 (61%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Frame = +1
Query: 58 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 225
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK-- 73
Query: 226 TDAERSFRKL 255
D + FRK+
Sbjct: 74 DDESQVFRKI 83
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 107 bits (258), Expect = 2e-22
Identities = 50/98 (51%), Positives = 70/98 (71%)
Frame = +3
Query: 243 FPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 422
F +I+L + VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I
Sbjct: 81 FRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAI 140
Query: 423 GFTNKDSLSQRKTCYAQHTQVRAIRKKMWKSLHATSLT 536
T + +KT YA +Q+RAIR+KM + + + T
Sbjct: 141 AVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREAST 178
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/65 (63%), Positives = 50/65 (76%)
Frame = +1
Query: 61 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 240
DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED--H 79
Query: 241 SFRKL 255
+FRK+
Sbjct: 80 AFRKI 84
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +1
Query: 607 GIYPLRDVCNPKVKVLKRPRFEISKLMELHGE 702
GIYPL++V KVK+LK+P+F++ L+ LHGE
Sbjct: 203 GIYPLQNVHIRKVKLLKQPKFDLGGLLALHGE 234
Score = 37.5 bits (83), Expect = 0.32
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 494 QKENVEIITRDVTNSELREVVNKLIPDSIAKDIEKAAMASTLCAMFAIRK*KC*RGP 664
+++ EII R+ + L+++ NKLIP+ I ++IEKA IRK K + P
Sbjct: 165 RRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQP 221
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 103 bits (247), Expect = 4e-21
Identities = 46/93 (49%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Frame = +3
Query: 237 KVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 416
K + +++L+ + V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF
Sbjct: 82 KAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVF 141
Query: 417 CIGFTNKDSL---SQRKTCYAQHTQVRAIRKKM 506
+ FT K S S TCYA+ +QVRAIR+K+
Sbjct: 142 TLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKI 174
Score = 72.5 bits (170), Expect = 9e-12
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = +1
Query: 58 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 237
+DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LADL+ D +
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNSND 81
Query: 238 RSFRKL 255
+++RK+
Sbjct: 82 KAWRKV 87
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +1
Query: 610 IYPLRDVCNPKVKVLKRPRFEISKLMELH 696
I+PL+++ KVKVLKRP+ + +K+ EL+
Sbjct: 210 IFPLQNITIRKVKVLKRPKLDATKIAELY 238
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 102 bits (244), Expect = 1e-20
Identities = 46/80 (57%), Positives = 62/80 (77%)
Frame = +3
Query: 267 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 446
E V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S
Sbjct: 91 EDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSN 150
Query: 447 SQRKTCYAQHTQVRAIRKKM 506
+KT YA+ Q++ IRK M
Sbjct: 151 QIKKTSYAKSAQIKKIRKIM 170
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +1
Query: 55 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 216
I +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LADL
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADL 75
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 99 bits (238), Expect = 5e-20
Identities = 48/89 (53%), Positives = 62/89 (69%)
Frame = +3
Query: 240 VFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 419
+F + +L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F
Sbjct: 6 IFRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFV 65
Query: 420 IGFTNKDSLSQRKTCYAQHTQVRAIRKKM 506
I FT K Q+ YAQ T+++ +R ++
Sbjct: 66 IAFTKKQE-DQKSHAYAQTTRIKKLRAEI 93
Score = 38.7 bits (86), Expect = 0.14
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2
Query: 500 ENVEIITRDVTNSELREVVNKLIPDSIAKDIEKAAMASTLCAMFAIRK*KC*RGP 664
E VE++ R+V +L+ VV KLIPDSI +D A + + +RK K + P
Sbjct: 92 EIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKP 146
Score = 36.3 bits (80), Expect = 0.73
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 610 IYPLRDVCNPKVKVLKRPRFEISKLMELHGE 702
I+PL KVKVLK+P+ ++ +++ELH E
Sbjct: 129 IFPLSGALVRKVKVLKKPKLDLGRILELHSE 159
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 93.1 bits (221), Expect = 6e-18
Identities = 43/64 (67%), Positives = 52/64 (81%)
Frame = +1
Query: 58 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 237
VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D A
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQNDEVAF 81
Query: 238 RSFR 249
R F+
Sbjct: 82 RKFK 85
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 91.1 bits (216), Expect = 2e-17
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +1
Query: 55 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 234
+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQNDEVA 77
Query: 235 ERSFR 249
R F+
Sbjct: 78 FRKFK 82
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +1
Query: 595 EGCHGIYPLRDVCNPKVKVLKRPRFEISKLMELHGE 702
+ C IYPL DV KVK+LK+P+FE+ KLMELHGE
Sbjct: 146 KACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 181
Score = 53.2 bits (122), Expect = 6e-06
Identities = 23/39 (58%), Positives = 33/39 (84%)
Frame = +2
Query: 494 QKENVEIITRDVTNSELREVVNKLIPDSIAKDIEKAAMA 610
+K+ +EI+TR+V ++L+EVVNKLIPDSI KD+EKA +
Sbjct: 112 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQS 150
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +3
Query: 243 FPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 395
F + +LI E VQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 78 FRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 88.6 bits (210), Expect = 1e-16
Identities = 35/94 (37%), Positives = 61/94 (64%)
Frame = +3
Query: 237 KVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 416
+ + ++R + VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F
Sbjct: 82 EAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLF 141
Query: 417 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMWKSL 518
+ FT + Q + CYA+ V+ +R ++ K +
Sbjct: 142 VVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMI 175
Score = 77.0 bits (181), Expect = 4e-13
Identities = 33/65 (50%), Positives = 46/65 (70%)
Frame = +1
Query: 61 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 240
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL E
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 241 SFRKL 255
++RK+
Sbjct: 83 AYRKV 87
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 601 CHGIYPLRDVCNPKVKVLKRPRFEISKLMELHG 699
C+ I PLR++ KV+V++ P+F+ L+ HG
Sbjct: 204 CNPILPLRELRIRKVRVVRTPKFDAQALLSAHG 236
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 88.2 bits (209), Expect = 2e-16
Identities = 39/86 (45%), Positives = 59/86 (68%)
Frame = +3
Query: 249 QIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 428
+++LI + V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I F
Sbjct: 82 KVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAF 141
Query: 429 TNKDSLSQRKTCYAQHTQVRAIRKKM 506
T QRKT YAQ +Q++ IRKK+
Sbjct: 142 TKSIKNQQRKTTYAQRSQIKDIRKKI 167
Score = 66.9 bits (156), Expect = 5e-10
Identities = 29/66 (43%), Positives = 46/66 (69%)
Frame = +1
Query: 58 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 237
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADLQ +D +
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD-Q 77
Query: 238 RSFRKL 255
++RK+
Sbjct: 78 MAWRKV 83
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/79 (44%), Positives = 50/79 (63%)
Frame = +3
Query: 273 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 452
++G + F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T +
Sbjct: 43 IKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYV 102
Query: 453 RKTCYAQHTQVRAIRKKMW 509
+KTCY +H+ + IRK M+
Sbjct: 103 KKTCYVKHSDEKKIRKIMF 121
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 73.3 bits (172), Expect = 5e-12
Identities = 35/80 (43%), Positives = 52/80 (65%)
Frame = +3
Query: 279 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 458
G V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S +
Sbjct: 89 GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKN 148
Query: 459 TCYAQHTQVRAIRKKMWKSL 518
YA + R +R M K+L
Sbjct: 149 HTYANSHKARQVRDVMIKAL 168
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/88 (37%), Positives = 52/88 (59%)
Frame = +3
Query: 258 LIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 437
L + V L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I FT++
Sbjct: 86 LQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDR 145
Query: 438 DSLSQRKTCYAQHTQVRAIRKKMWKSLH 521
+RK C+ + +R +R ++++LH
Sbjct: 146 FRFQRRKNCHVKGRVIRMMRAGIYETLH 173
Score = 57.6 bits (133), Expect = 3e-07
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +1
Query: 61 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 216
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDL 71
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 69.7 bits (163), Expect = 6e-11
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +3
Query: 240 VFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 419
V + +LI E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC
Sbjct: 65 VVRKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFC 123
Query: 420 IGF-TNKDSLSQRKTCYAQHTQVRAI 494
+G+ TN + R+ AQ+ QV I
Sbjct: 124 VGYTTNVTTRYARQLVCAQYQQVHQI 149
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +1
Query: 73 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFR 249
+KD YDVKA +MF+ R +G T V R Q TK+ S GL G VFE SLA LQ D R F+
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQNDKVVVRKFK 70
Score = 41.5 bits (93), Expect = 0.019
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 595 EGCHGIYPLRDVCNPKVKVLKRPRFEISKLMELH 696
+ C IYPL DV KVK+L++P+ ++ KL ELH
Sbjct: 182 KACQFIYPLHDVFVRKVKILQKPKLDLGKLPELH 215
Score = 38.7 bits (86), Expect = 0.14
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +2
Query: 506 VEIITRDVTNSELREVVNKLIPDSIAKDIEKA 601
+ I D ++L+EV+NKL+PD++ KD+EKA
Sbjct: 152 ITIQIMDQRRTDLKEVLNKLVPDNVGKDVEKA 183
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 69.7 bits (163), Expect = 6e-11
Identities = 30/69 (43%), Positives = 45/69 (65%)
Frame = +3
Query: 300 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 479
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 480 QVRAIRKKM 506
Q RA+R+++
Sbjct: 156 QKRALRRRI 164
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = -2
Query: 231 VSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSLDIVPIFASEWVDNL 52
+ + L ISQGN ++S L+ FR + S + +K A++ AE RR L+++P+ S+ V L
Sbjct: 76 ILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDRRRLNVIPVLLSKRVGCL 135
Query: 51 LLNTFFTALRQAFIFPD 1
LL++ F L +FPD
Sbjct: 136 LLSSLF-PLGNPLVFPD 151
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 595 EGCHGIYPLRDVCNPKVKVLKRPRFEISKLMELHGE 702
+ C IYPL DV KVK+LK+P+FE+ KLMELHG+
Sbjct: 14 KACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGD 49
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 50.4 bits (115), Expect = 4e-05
Identities = 31/94 (32%), Positives = 53/94 (56%)
Frame = +3
Query: 273 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 452
V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G T +
Sbjct: 82 VEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTA 141
Query: 453 RKTCYAQHTQVRAIRKKMWKSLHATSLTLNSGRW 554
+K+ A+RKKM ++L + L+SG++
Sbjct: 142 QKS---------AMRKKMIETLVKKAAELDSGQF 166
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +3
Query: 306 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 455
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K + S +
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQ 133
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +3
Query: 273 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 452
VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S
Sbjct: 77 VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSS 136
Query: 453 RKT 461
KT
Sbjct: 137 IKT 139
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 44.8 bits (101), Expect = 0.002
Identities = 30/80 (37%), Positives = 43/80 (53%)
Frame = +3
Query: 273 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 452
V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT
Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT------- 118
Query: 453 RKTCYAQHTQVRAIRKKMWK 512
T A+ +Q RAIRK+M+K
Sbjct: 119 --TRRAKTSQQRAIRKEMFK 136
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +1
Query: 622 RDVCNPKVKVLKRPRFEISKLMELHGE 702
R +C KVK+LK+P+FE+ KLMELHG+
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGD 89
Score = 41.5 bits (93), Expect = 0.019
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +1
Query: 55 IVDPFTRKDWYDVKAPSMFSKRQVGTT 135
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 40.7 bits (91), Expect = 0.034
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +3
Query: 267 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 437
E + G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K
Sbjct: 70 EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK 126
Score = 37.5 bits (83), Expect = 0.32
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +1
Query: 58 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 225
VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGD 57
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 40.7 bits (91), Expect = 0.034
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +3
Query: 312 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 491
+LT D LR +V++ + +EA+I V TTD Y +RV + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKA 133
Query: 492 IRKKMWKSLHATS 530
IR+ M +HA +
Sbjct: 134 IRRVMIDKVHAAA 146
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 39.5 bits (88), Expect = 0.078
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +3
Query: 150 PGNE--NCFGRIEGKSFRSFPG*STS*H*RGKVFPQIRLIAEYVQGRNVLCNFHGMDLTT 323
P N+ N GRI S R T+ H K ++ + V G N F G D T
Sbjct: 42 PANDPANLIGRISEISLRDL----TNEH--SKHMTRMYFKVDGVSGNNATSQFVGHDTTR 95
Query: 324 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 461
+ L+ V++ ++ I A ++V+T DG+ +RV + T + KT
Sbjct: 96 EYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 38.7 bits (86), Expect = 0.14
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 273 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLS 449
V G N F +LT + L + ++ + IE +DV T DGY LRV + FT + S
Sbjct: 76 VAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVRRCKTS 135
Query: 450 QRKTCYAQHTQV 485
Q++ A Q+
Sbjct: 136 QKRAIRAIMRQI 147
>UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1;
Desulfovibrio desulfuricans G20|Rep: Putative
uncharacterized protein - Desulfovibrio desulfuricans
(strain G20)
Length = 351
Score = 38.3 bits (85), Expect = 0.18
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = -1
Query: 637 DCKHRAEGRCHGSLLDVLGNGVRN---QLVHHLPEFRVSDVACNDFHIFFLIALT*VCWA 467
D H E C D + + +R+ +L+H + S AC D + FF+ LT + A
Sbjct: 92 DAPHYTE--CAARAADFILSAMRDSNGRLLHRWRNGKASVTACLDDYAFFIAGLTALYEA 149
Query: 466 *HVLRWLKESLLVKPMQKT 410
H +RWL+E+ ++ +Q T
Sbjct: 150 THEVRWLREAAALQQVQDT 168
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 37.5 bits (83), Expect = 0.32
Identities = 29/94 (30%), Positives = 50/94 (53%)
Frame = +3
Query: 156 NENCFGRIEGKSFRSFPG*STS*H*RGKVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLR 335
+E+ GRI + + F G T H V + R ++E V G++ L F G T+ +R
Sbjct: 51 DEHIIGRIYEMTQQEFNGDFTKMH----VMLRFR-VSETV-GQDALTTFVGHHHQTNHIR 104
Query: 336 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 437
+++++ I+ IDV T DGY++R+ + T K
Sbjct: 105 RQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 36.7 bits (81), Expect = 0.55
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 276 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 431
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 36.3 bits (80), Expect = 0.73
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 273 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 452
V+G F G +L D +R + ++ + + +V T DGY LRV + FT + +
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTS 129
Query: 453 RKT 461
+K+
Sbjct: 130 QKS 132
>UniRef50_A4S2V3 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 475
Score = 34.3 bits (75), Expect = 2.9
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 443 LEPTQDVLRPAHSGQSNQKENVEIITRDVTNSELREVVNKLIPDSIAKDIEK 598
+E +D L AH+ ENVE + + T +E R+ + I D+ K++E+
Sbjct: 361 IEQLRDELEHAHALSDTLAENVETLRAEATRAEKRKTIELAIKDARIKELEE 412
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 34.3 bits (75), Expect = 2.9
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 312 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRKTCYAQHTQVR 488
+LT D LR +V++ + +EA I V TTD Y +++ + T K + SQ K + T +
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKKADASQEKA--IRRTMID 140
Query: 489 AIRK 500
+R+
Sbjct: 141 LVRE 144
>UniRef50_Q5K9I9 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 215
Score = 33.5 bits (73), Expect = 5.1
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = -1
Query: 661 ASSTLSLSDCKHRAEGRCHGSLLDV-LGNGVRNQLVHHLP 545
ASST S++ C H ++GR S++ V L + + ++++ HLP
Sbjct: 11 ASSTSSVASCPHSSDGRPQQSIVRVSLSSQISSRIIFHLP 50
>UniRef50_Q09743 Cluster: Protein ste16; n=1; Schizosaccharomyces
pombe|Rep: Protein ste16 - Schizosaccharomyces pombe
(Fission yeast)
Length = 1309
Score = 33.5 bits (73), Expect = 5.1
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 416 LHWFHQ*GLLEPTQDVLRPAHSGQ--SNQKENVEIITRDVTNSELREVVNKL 565
LHW+ L+ +Q + P H+GQ S + NVE + V E +++ L
Sbjct: 1162 LHWYSLMSLMGTSQGICIPRHAGQVLSTPRRNVEFVNERVPTPEFSSLLSSL 1213
>UniRef50_P82984 Cluster: Putative odorant receptor 65c; n=2;
Drosophila melanogaster|Rep: Putative odorant receptor
65c - Drosophila melanogaster (Fruit fly)
Length = 410
Score = 33.5 bits (73), Expect = 5.1
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = -2
Query: 690 FHQLRDLETGPLQHFHFRIANIAQRVDAMAAFSMSLAMESGINLFTTSLS 541
+ QLR LET L FH +I +I + + F +L M+ G+N F SLS
Sbjct: 253 YEQLR-LETNRLVQFHQKIVHILDHTNKV--FHGTLIMQMGVNFFLVSLS 299
>UniRef50_Q7PR93 Cluster: ENSANGP00000010616; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000010616 - Anopheles gambiae
str. PEST
Length = 304
Score = 33.1 bits (72), Expect = 6.8
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 473 AHSGQSNQKENVEIITRDVTNSELREVVNKLIPDSIAKDIEK 598
A QSN+KE +++ DV+ E+ +V K + + K++EK
Sbjct: 199 AAEAQSNEKETKDVVMEDVSVQEVGKVSEKEVEKVVEKEVEK 240
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.1 bits (72), Expect = 6.8
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 300 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 458
F + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 82 FKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 9.0
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 310 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 435
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 32.7 bits (71), Expect = 9.0
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +3
Query: 237 KVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 416
K + ++R + V G F G TTD +R M+++ + I+A+ VKT D +++
Sbjct: 62 KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLH 121
Query: 417 CIGFTNKDSLSQRK 458
+ T + + S ++
Sbjct: 122 VLAVTTRRAKSSQQ 135
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,978,453
Number of Sequences: 1657284
Number of extensions: 14793240
Number of successful extensions: 44050
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 42381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44042
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -