Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00020
         (703 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   142   1e-35
DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domai...    27   0.76 
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    26   1.3  
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    24   5.3  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    24   5.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.3  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  142 bits (344), Expect = 1e-35
 Identities = 64/88 (72%), Positives = 76/88 (86%)
 Frame = +3

Query: 243 FPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 422
           F + +L+AE V GR+VL NFHGM LTTDKLR MV KWQTLIE ++DVKTTDG++LRVFCI
Sbjct: 84  FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFCI 143

Query: 423 GFTNKDSLSQRKTCYAQHTQVRAIRKKM 506
           GFT KDS+SQRKTCYAQH+Q++ IR KM
Sbjct: 144 GFTIKDSMSQRKTCYAQHSQIKNIRAKM 171



 Score =  121 bits (291), Expect = 3e-29
 Identities = 56/66 (84%), Positives = 60/66 (90%)
 Frame = +1

Query: 55  IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 234
           +VDPFTRKDWYDVKAP+MF  RQ G TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21  VVDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80

Query: 235 ERSFRK 252
           ERSFRK
Sbjct: 81  ERSFRK 86



 Score = 52.4 bits (120), Expect = 1e-08
 Identities = 22/36 (61%), Positives = 28/36 (77%)
 Frame = +1

Query: 595 EGCHGIYPLRDVCNPKVKVLKRPRFEISKLMELHGE 702
           + C  +YPL DV   KVKVLK+PRF++S LMELHG+
Sbjct: 202 KACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGD 237



 Score = 46.0 bits (104), Expect = 1e-06
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = +2

Query: 512 IITRDVTNSELREVVNKLIPDSIAKDIEKAAMASTLCAMFAIRK*KC*RGP 664
           II R++T+++L+ VV KL+PDSIAKDIEKA           IRK K  + P
Sbjct: 174 IIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKP 224


>DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 122

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 286 LRPCTYSAINLICGKTFPRQ 227
           +RP TY  IN ICG+ + R+
Sbjct: 77  VRPDTYFRINCICGEEYDRE 96


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 550 GGEQVDS*LHCQGHREGCHGIY 615
           GG   DS  H QG   GC+G++
Sbjct: 408 GGSSPDSIRHMQGRPGGCNGLH 429


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +1

Query: 403 FYVSSALVSPIRTP*ANARRATPSTLRSEQSERKCGNHYTRR 528
           F  +++ ++P+     N R+     L     E+ CG+H T R
Sbjct: 312 FASTNSCMNPVVYGVFNVRKKHTKKLLKTTHEKSCGSHLTMR 353


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +1

Query: 403 FYVSSALVSPIRTP*ANARRATPSTLRSEQSERKCGNHYTRR 528
           F  +++ ++P+     N R+     L     E+ CG+H T R
Sbjct: 312 FASTNSCMNPVVYGVFNVRKKHTKKLLKTTHEKSCGSHLTMR 353


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 694 EVPSTSRSRNGASSTLSLS 638
           EVP+T   ++ ASS+ SLS
Sbjct: 117 EVPTTPEHKSAASSSCSLS 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,459
Number of Sequences: 2352
Number of extensions: 15612
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)