Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00019
(405 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-... 124 9e-28
UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4; Eukary... 121 5e-27
UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=... 118 4e-26
UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47; Eutel... 117 1e-25
UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1; ... 114 5e-25
UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4; Eukary... 108 5e-23
UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13; Eukaryota... 87 1e-16
UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6; ... 84 1e-15
UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative; ... 77 2e-13
UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal ... 75 4e-13
UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of cy... 75 7e-13
UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42; Euka... 74 9e-13
UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea... 73 2e-12
UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177, w... 72 4e-12
UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2; ... 72 5e-12
UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative; ... 71 1e-11
UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostel... 63 2e-09
UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4; Peziz... 60 2e-08
UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal ... 55 6e-07
UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;... 51 1e-05
UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lambl... 48 9e-05
UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1; Enceph... 39 0.033
UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal ... 39 0.043
UniRef50_Q3T2M5 Cluster: Cassette chromosome recombinase C; n=15... 33 1.6
UniRef50_A1SP86 Cluster: ABC transporter related precursor; n=1;... 33 2.9
UniRef50_UPI0000F1FDCC Cluster: PREDICTED: similar to MGC154468 ... 32 3.8
UniRef50_Q86SD5 Cluster: Tensin homologue; n=1; Ciona intestinal... 32 3.8
UniRef50_A1S8A0 Cluster: Tetraheme cytochrome c, putative precur... 32 5.0
UniRef50_A4B1R0 Cluster: TonB-dependent receptor; n=1; Alteromon... 31 6.6
UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5; Therm... 31 6.6
UniRef50_UPI00015B5B14 Cluster: PREDICTED: similar to allergen 5... 31 8.7
UniRef50_UPI0000D5766E Cluster: PREDICTED: similar to CG2179-PA,... 31 8.7
UniRef50_UPI0000661128 Cluster: Homolog of Brachydanio rerio "Pr... 31 8.7
UniRef50_Q5PLF5 Cluster: Cytosine permease; n=24; Gammaproteobac... 31 8.7
UniRef50_A0LSI1 Cluster: Cellulose-binding, family II precursor;... 31 8.7
UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2; Desul... 31 8.7
>UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA
- Drosophila melanogaster (Fruit fly)
Length = 157
Score = 124 bits (298), Expect = 9e-28
Identities = 54/85 (63%), Positives = 69/85 (81%)
Frame = +1
Query: 1 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 180
GRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ + FY GK CVYVY+A+ + +P
Sbjct: 48 GRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQH 107
Query: 181 PRGKKTKLRAIWGKVTRPHGNSGSV 255
P +KT++RA+WGKVTR HGN+G+V
Sbjct: 108 PE-RKTRVRAVWGKVTRIHGNTGAV 131
Score = 48.0 bits (109), Expect = 7e-05
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
RA+F NLP AMGHRIR+MLYPSRI
Sbjct: 132 RARFNRNLPGHAMGHRIRIMLYPSRI 157
>UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4;
Eukaryota|Rep: Clone ZZZ247 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 128
Score = 121 bits (292), Expect = 5e-27
Identities = 54/85 (63%), Positives = 64/85 (75%)
Frame = +1
Query: 1 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 180
GRLY KA FTGY+RGLRNQHE+TALL+++G +R FY GK CVYVYRA+K+ P
Sbjct: 20 GRLYVKATFTGYRRGLRNQHESTALLRIDGVTERKSTEFYLGKRCVYVYRAEKKKVFP-- 77
Query: 181 PRGKKTKLRAIWGKVTRPHGNSGSV 255
R K TK+R IWGK+ RPHGNSG V
Sbjct: 78 RRQKPTKIRVIWGKIMRPHGNSGIV 102
Score = 48.0 bits (109), Expect = 7e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
RA+FK NLPA AMG RIRVMLYPSR+
Sbjct: 103 RARFKHNLPASAMGKRIRVMLYPSRV 128
>UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=1;
Ciona intestinalis|Rep: Putative 60S ribosomal protein
L35a - Ciona intestinalis (Transparent sea squirt)
Length = 122
Score = 118 bits (284), Expect = 4e-26
Identities = 56/94 (59%), Positives = 69/94 (73%)
Frame = +1
Query: 4 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 183
RL+ KAVFTGY RGLRNQHE+TALL++EG ++ D FY GK C YVY+AK++T P
Sbjct: 4 RLWCKAVFTGYTRGLRNQHEHTALLRIEGVTNKEDTDFYLGKKCAYVYKAKRKTKT---P 60
Query: 184 RGKKTKLRAIWGKVTRPHGNSGSVEPSSSLTSLP 285
RG+ K R IWGKVTR HGNSG V ++ T+LP
Sbjct: 61 RGEPNKTRVIWGKVTRSHGNSGVVR-ATFKTNLP 93
>UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47;
Euteleostomi|Rep: 60S ribosomal protein L35a - Homo
sapiens (Human)
Length = 110
Score = 117 bits (281), Expect = 1e-25
Identities = 54/85 (63%), Positives = 62/85 (72%)
Frame = +1
Query: 1 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 180
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 181 PRGKKTKLRAIWGKVTRPHGNSGSV 255
GK K R IWGKVTR HGNSG V
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMV 84
Score = 52.8 bits (121), Expect = 2e-06
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = +3
Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
RAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 85 RAKFRSNLPAKAIGHRIRVMLYPSRI 110
>UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1;
Diaphorina citri|Rep: Putative ribosomal protein L35Ae -
Diaphorina citri (Asian citrus psyllid)
Length = 172
Score = 114 bits (275), Expect = 5e-25
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = +1
Query: 1 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 180
GRLYA+A+FTG+KRG RNQH NT+LL +E + DA FY GK CV++Y+AK + P
Sbjct: 64 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 123
Query: 181 PRGKKTKLRAIWGKVTRPHGNSGSV 255
R K++LRAIWGKVTRPHG+SGSV
Sbjct: 124 KR--KSRLRAIWGKVTRPHGSSGSV 146
Score = 40.7 bits (91), Expect = 0.011
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 189 QKNQAACYLGQGDPPTWQLWQCRAKFKSNLPAQAMGHRIRVMLYPSRI 332
+K++ G+ P RAKF NLPA MG ++R+MLYPS I
Sbjct: 125 RKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 172
>UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4;
Eukaryota|Rep: 60S ribosomal protein L35a -
Caenorhabditis elegans
Length = 124
Score = 108 bits (259), Expect = 5e-23
Identities = 50/85 (58%), Positives = 64/85 (75%)
Frame = +1
Query: 1 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 180
GRLY KA+FTG+KRGLR Q E+T+LLK+EG ++ DA FYAGK VY+Y+A +T G
Sbjct: 16 GRLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYKAHNKTLKTG- 74
Query: 181 PRGKKTKLRAIWGKVTRPHGNSGSV 255
T+ RAIWGK+TRPHGN+G+V
Sbjct: 75 -HTVATRTRAIWGKITRPHGNAGAV 98
Score = 39.9 bits (89), Expect = 0.019
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
RAKF N+P A+G RIRV+LYPS I
Sbjct: 99 RAKFHHNIPPSALGKRIRVLLYPSNI 124
>UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13;
Eukaryota|Rep: Ribosomal protein L35A - Zea mays (Maize)
Length = 112
Score = 87.0 bits (206), Expect = 1e-16
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +1
Query: 4 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 183
RLY + GYKR NQ+E T+L+++EG + D +YAGK Y+Y+AK ++
Sbjct: 11 RLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS------ 64
Query: 184 RGKKTKLRAIWGKVTRPHGNSGSV 255
+T+ R IWGKVTRPHGNSG V
Sbjct: 65 --SETRYRCIWGKVTRPHGNSGVV 86
Score = 44.0 bits (99), Expect = 0.001
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +3
Query: 207 CYLGQGDPPTWQLWQCRAKFKSNLPAQAMGHRIRVMLYPSRI 332
C G+ P RAKFKSNLP ++MG ++RV +YPS I
Sbjct: 71 CIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI 112
>UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein l35a, putative -
Leishmania major
Length = 144
Score = 83.8 bits (198), Expect = 1e-15
Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Frame = +1
Query: 4 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAK--KRTPIPG 177
RLY K GY RGL Q + TAL++VE R DA +Y GK YVY K KR
Sbjct: 32 RLYMKGTLAGYTRGLHGQTKQTALVRVENVNTREDATWYVGKRVCYVYHGKKVKRCVRWS 91
Query: 178 GPRGKKTKLRAIWGKVTRPHGNSGSVEPSSSLTSLP 285
+++ RA+WG+VTRPHGN+G + + S+P
Sbjct: 92 KAPARRSTTRALWGRVTRPHGNAGMMRVKFNGASVP 127
Score = 36.3 bits (80), Expect = 0.23
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 177 RSPWQKNQAACYLGQGDPPTWQLWQCRAKFK-SNLPAQAMGHRIRVMLYPSRI 332
++P +++ G+ P R KF +++PA A+G RIRV LYPS+I
Sbjct: 92 KAPARRSTTRALWGRVTRPHGNAGMMRVKFNGASVPASAIGRRIRVYLYPSQI 144
>UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative;
n=2; Filobasidiella neoformans|Rep: 60s ribosomal
protein l33-b, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 178
Score = 76.6 bits (180), Expect = 2e-13
Identities = 41/94 (43%), Positives = 58/94 (61%)
Frame = +1
Query: 4 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 183
RLY K G+KRG RN N +LL++EG ++ A Y GK YVY+AK+ I G
Sbjct: 77 RLYIKGRILGHKRGKRNSRPNQSLLQIEGVDNKEAAGHYLGKRVAYVYKAKRE--ING-- 132
Query: 184 RGKKTKLRAIWGKVTRPHGNSGSVEPSSSLTSLP 285
+++R IWG+++R HGNSG+V+ S T+LP
Sbjct: 133 ----SRVRVIWGRISRSHGNSGAVK-SKFRTNLP 161
Score = 34.7 bits (76), Expect = 0.71
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
++KF++NLPA+ G R+ML+PS I
Sbjct: 153 KSKFRTNLPAKTFGASCRIMLFPSNI 178
>UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal
protein L35a; n=7; Euarchontoglires|Rep: PREDICTED:
similar to ribosomal protein L35a - Mus musculus
Length = 86
Score = 75.4 bits (177), Expect = 4e-13
Identities = 36/62 (58%), Positives = 40/62 (64%)
Frame = +1
Query: 70 ALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSG 249
ALLK+EG R++ FY GK C YVY+AK T PG GK K R IWGKVTR HGNS
Sbjct: 2 ALLKIEGVYARDETEFYLGKRCAYVYKAKNNTMTPG---GKLNKTRMIWGKVTRAHGNSS 58
Query: 250 SV 255
V
Sbjct: 59 MV 60
Score = 52.8 bits (121), Expect = 2e-06
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = +3
Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
RAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 61 RAKFRSNLPAKAIGHRIRVMLYPSRI 86
>UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L35a, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 109
Score = 74.5 bits (175), Expect = 7e-13
Identities = 37/84 (44%), Positives = 47/84 (55%)
Frame = +1
Query: 4 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 183
RLY + + GYKR NQ+ +T+L+K+EG D FY GK YVY+AK +
Sbjct: 8 RLYVRGLILGYKRARTNQYNHTSLIKLEGVSDAPSTAFYGGKKLCYVYKAKTKK------ 61
Query: 184 RGKKTKLRAIWGKVTRPHGNSGSV 255
+ T R IWGKV R HG SG V
Sbjct: 62 --QGTAYRTIWGKVMRAHGTSGVV 83
Score = 39.5 bits (88), Expect = 0.025
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +3
Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
RAKFKS+LP+ ++G ++R MLYPS I
Sbjct: 84 RAKFKSHLPSNSIGGKVRCMLYPSNI 109
>UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42;
Eukaryota|Rep: 60S ribosomal protein L33-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 107
Score = 74.1 bits (174), Expect = 9e-13
Identities = 39/84 (46%), Positives = 48/84 (57%)
Frame = +1
Query: 4 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 183
RLY K Y+R R + N +L+K+EG +A FY GK YVYRA K
Sbjct: 6 RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEV------ 59
Query: 184 RGKKTKLRAIWGKVTRPHGNSGSV 255
RG +K+R +WGKVTR HGNSG V
Sbjct: 60 RG--SKIRVMWGKVTRTHGNSGVV 81
Score = 35.9 bits (79), Expect = 0.31
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
RA F++NLPA+ G +R+ LYPS I
Sbjct: 82 RATFRNNLPAKTFGASVRIFLYPSNI 107
>UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea
mays (Maize)
Length = 139
Score = 72.9 bits (171), Expect = 2e-12
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = +1
Query: 40 RGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWG 219
R NQ+E T+L+++EG + D +YAGK Y+Y+AK ++ +T+ R IWG
Sbjct: 43 RSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS--------SETRYRCIWG 94
Query: 220 KVTRPHGNSGSV 255
KVTRPHGNSG V
Sbjct: 95 KVTRPHGNSGVV 106
>UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=9; Eukaryota|Rep:
Chromosome undetermined scaffold_177, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 129
Score = 72.1 bits (169), Expect = 4e-12
Identities = 36/84 (42%), Positives = 50/84 (59%)
Frame = +1
Query: 4 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 183
RL+ KAVFTG++R Q+EN ALLK+E D + FY GK Y+Y+A
Sbjct: 28 RLWVKAVFTGFRRSKVQQNENQALLKIEHVNDVASSRFYWGKRVAYIYKAHSLK------ 81
Query: 184 RGKKTKLRAIWGKVTRPHGNSGSV 255
TK RAIWG++++ HG++G V
Sbjct: 82 --NNTKFRAIWGRISKSHGSNGVV 103
Score = 32.3 bits (70), Expect = 3.8
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 258 AKFKSNLPAQAMGHRIRVMLYPSR 329
A+F NLP +A+G +RV LYP+R
Sbjct: 105 ARFGRNLPPRAIGSTLRVFLYPNR 128
>UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 102
Score = 71.7 bits (168), Expect = 5e-12
Identities = 37/82 (45%), Positives = 48/82 (58%)
Frame = +1
Query: 4 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 183
RLY K Y+RG R + NT+L+K+EG +D A FY GK +VYRAK+
Sbjct: 8 RLYVKGRHLSYQRGKRATNPNTSLIKLEGVEDIKAANFYLGKKVAFVYRAKREV------ 61
Query: 184 RGKKTKLRAIWGKVTRPHGNSG 249
+ +K+R IWGKVTR HG G
Sbjct: 62 --QGSKIRVIWGKVTRTHGQLG 81
>UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative;
n=5; Plasmodium|Rep: 60S ribosomal protein L33-B,
putative - Plasmodium vivax
Length = 146
Score = 70.5 bits (165), Expect = 1e-11
Identities = 36/84 (42%), Positives = 42/84 (50%)
Frame = +1
Query: 4 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 183
RLY K V GYKR RNQ N L+ + + A FY GK YVYR K
Sbjct: 45 RLYEKGVILGYKRSQRNQDPNFTLISIRNVHTKKHAQFYVGKKIAYVYRTNK-------- 96
Query: 184 RGKKTKLRAIWGKVTRPHGNSGSV 255
K++ IWGKV R HGNSG +
Sbjct: 97 HHDGVKIKCIWGKVCRTHGNSGVI 120
Score = 38.7 bits (86), Expect = 0.043
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +3
Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
RA+F++N+P +A G R+R+++YPS I
Sbjct: 121 RARFRTNIPPKAFGDRVRILMYPSNI 146
>UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L35a -
Dictyostelium discoideum AX4
Length = 105
Score = 62.9 bits (146), Expect = 2e-09
Identities = 31/85 (36%), Positives = 45/85 (52%)
Frame = +1
Query: 4 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 183
++Y+K V GY+R Q+ N +L+K+EG R D+ FY GK V + K P
Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAK---NP 59
Query: 184 RGKKTKLRAIWGKVTRPHGNSGSVE 258
G K WGK+ + HG+SG V+
Sbjct: 60 TGHKIS----WGKICKTHGSSGVVQ 80
Score = 37.1 bits (82), Expect = 0.13
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
+A+F NLP +AMG +RVMLYPS I
Sbjct: 80 QARFARNLPPKAMGAPVRVMLYPSNI 105
>UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L35Ae -
Aspergillus fumigatus (Sartorya fumigata)
Length = 119
Score = 60.1 bits (139), Expect = 2e-08
Identities = 31/73 (42%), Positives = 43/73 (58%)
Frame = +1
Query: 37 KRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIW 216
++G+ + +L+K++G A FY GK +VYRAK+ RG + +R IW
Sbjct: 29 RQGIWEADTSYSLIKIDGVDSTEAANFYLGKKVAFVYRAKREV------RG--SNIRVIW 80
Query: 217 GKVTRPHGNSGSV 255
GKVTRPHGNSG V
Sbjct: 81 GKVTRPHGNSGVV 93
Score = 36.7 bits (81), Expect = 0.18
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
RA+F+ NLP ++ G +RVMLYPS I
Sbjct: 94 RAQFRHNLPPKSFGATVRVMLYPSNI 119
>UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein L35a - Macaca mulatta
Length = 80
Score = 54.8 bits (126), Expect = 6e-07
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = +1
Query: 1 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGK 129
GRL++KAVF GYKRG RNQ E+TALLK+E ++ FY K
Sbjct: 3 GRLWSKAVFAGYKRGPRNQREHTALLKIEAVYAGDETEFYLDK 45
Score = 45.6 bits (103), Expect = 4e-04
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +3
Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
RAKF+SNLPA+A+GH I+VMLYPS I
Sbjct: 55 RAKFQSNLPAKAIGHGIQVMLYPSSI 80
>UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L35Ae,
putative - Trichomonas vaginalis G3
Length = 102
Score = 50.8 bits (116), Expect = 1e-05
Identities = 29/84 (34%), Positives = 43/84 (51%)
Frame = +1
Query: 4 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 183
+L+ A F ++R R N ALL+++G + +A FYAGK V++ K+ I
Sbjct: 6 KLFVPATFVSFRRSKRIIKPNQALLEIQGVVSKEEAQFYAGKKVASVWKFDKQEFIN--- 62
Query: 184 RGKKTKLRAIWGKVTRPHGNSGSV 255
WG +T+PHGNSG V
Sbjct: 63 ----------WGVITQPHGNSGVV 76
Score = 40.7 bits (91), Expect = 0.011
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
RAKF+ NLP Q +G ++RVMLYPS I
Sbjct: 77 RAKFEKNLPPQMLGKQVRVMLYPSTI 102
>UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_479_47445_47074 - Giardia lamblia
ATCC 50803
Length = 123
Score = 47.6 bits (108), Expect = 9e-05
Identities = 32/95 (33%), Positives = 46/95 (48%)
Frame = +1
Query: 1 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 180
G+ + A+F GY+R Q EN AL+KV G R + G+ + + +K P
Sbjct: 6 GKTFLPAIFVGYQRSRAKQRENVALVKVSGIYTRAETDKVLGR-LIAIIHSKSGKP---- 60
Query: 181 PRGKKTKLRAIWGKVTRPHGNSGSVEPSSSLTSLP 285
I+GK+ RPHGNSG V + T+LP
Sbjct: 61 ----------IFGKICRPHGNSGMVR-ARFYTNLP 84
Score = 32.3 bits (70), Expect = 3.8
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 255 RAKFKSNLPAQAMGHRIRV 311
RA+F +NLP Q MGH++RV
Sbjct: 76 RARFYTNLPGQLMGHKVRV 94
>UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L35A
- Encephalitozoon cuniculi
Length = 113
Score = 39.1 bits (87), Expect = 0.033
Identities = 27/94 (28%), Positives = 39/94 (41%)
Frame = +1
Query: 19 AVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKT 198
A F +KRG R H LLK+ +++A Y G V + + P
Sbjct: 18 ATFVSFKRGQRRLHPRHVLLKIRNVTSKDEASSYVGNGVVCYKKNNEGERYP-------- 69
Query: 199 KLRAIWGKVTRPHGNSGSVEPSSSLTSLPRLWDT 300
+ G +TR HGNSG+V + P+L T
Sbjct: 70 ----VHGVITRIHGNSGAVRARFTRNLDPKLLGT 99
>UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L35a - Rattus norvegicus
Length = 106
Score = 38.7 bits (86), Expect = 0.043
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 1 GRLYAKAVFTGYKR--GLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 174
GR KAV G+ G+R+ + + EG R++ + K C YVY+AK P
Sbjct: 22 GRYTRKAVVQGHFSWLGVRSLKPKSTD-RAEGVYARDETELHLAKRCAYVYKAKISAVTP 80
Query: 175 GGPRGKKTKLRAIWGKVTRP 234
G GK K R + GK P
Sbjct: 81 G---GKTNKTRVVRGKQLGP 97
>UniRef50_Q3T2M5 Cluster: Cassette chromosome recombinase C; n=15;
Staphylococcus|Rep: Cassette chromosome recombinase C -
Staphylococcus aureus
Length = 559
Score = 33.5 bits (73), Expect = 1.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 22 VFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKH 132
V+ GY R N H+N A+ + G D+ND + GKH
Sbjct: 233 VYKGYVRF--NNHQNWAVQRRSGKSDKNDVILVKGKH 267
>UniRef50_A1SP86 Cluster: ABC transporter related precursor; n=1;
Nocardioides sp. JS614|Rep: ABC transporter related
precursor - Nocardioides sp. (strain BAA-499 / JS614)
Length = 254
Score = 32.7 bits (71), Expect = 2.9
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = -2
Query: 326 GRIQHHSYSVSHSLGREVRLE--LGSTLPELPCGRVTLPQIARSLVFLPR 183
GR + + + +L + RLE +T+ ELP GRV L ++AR++ PR
Sbjct: 121 GRAERRTAERTDALLADFRLEDVRDATIGELPLGRVRLVEVARAMAMSPR 170
>UniRef50_UPI0000F1FDCC Cluster: PREDICTED: similar to MGC154468
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
MGC154468 protein - Danio rerio
Length = 125
Score = 32.3 bits (70), Expect = 3.8
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 184 RGKKTKLRAIWGKVTRPHGNSGSVEPSSSLTSLPRLWD 297
R +++++R ++G +TRP SV PSSSL + W+
Sbjct: 69 RPQESRIRNLFGFLTRPSLTRSSVSPSSSLPASSSTWE 106
>UniRef50_Q86SD5 Cluster: Tensin homologue; n=1; Ciona
intestinalis|Rep: Tensin homologue - Ciona intestinalis
(Transparent sea squirt)
Length = 969
Score = 32.3 bits (70), Expect = 3.8
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 163 TPIPGGPRGKKTKLRAIWGKVTRPHGN-SGSVEPSSS 270
+PI P GK + +I T PHGN SG V P+ +
Sbjct: 496 SPIASSPAGKSPVISSIASSATPPHGNGSGEVSPAGT 532
>UniRef50_A1S8A0 Cluster: Tetraheme cytochrome c, putative
precursor; n=1; Shewanella amazonensis SB2B|Rep:
Tetraheme cytochrome c, putative precursor - Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B)
Length = 122
Score = 31.9 bits (69), Expect = 5.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 256 RHCQSCHVGGSPCPR*HAAWFFCHGDLRELVSSS 155
+ C++CH+G P AA CHG E+ +S+
Sbjct: 43 KDCKTCHLGSPKGPATEAACIDCHGSYDEMAAST 76
>UniRef50_A4B1R0 Cluster: TonB-dependent receptor; n=1; Alteromonas
macleodii 'Deep ecotype'|Rep: TonB-dependent receptor -
Alteromonas macleodii 'Deep ecotype'
Length = 640
Score = 31.5 bits (68), Expect = 6.6
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 26 SQDISVVYATSTRTPLS-SRLKEQKTVMMQSFMLASIASMCTELRRGHQFPEVPVAKKPS 202
+QDI + T TR P+S ++L +V+ +S + AS A T+L RG P V +A+ S
Sbjct: 28 NQDIETLTVTGTRLPISLTKLPGSVSVLTESDIQASGALQLTDLIRG--LPGVSLAQSGS 85
>UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L35Ae -
Pyrococcus abyssi
Length = 87
Score = 31.5 bits (68), Expect = 6.6
Identities = 23/80 (28%), Positives = 32/80 (40%)
Frame = +1
Query: 16 KAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKK 195
K V Y+R NQH N ++K R +A G+ ++ P GK
Sbjct: 4 KGVVLSYRRSKENQHTNVMIIKPLNVNSREEASKLIGRLVIW-----------KSPSGKL 52
Query: 196 TKLRAIWGKVTRPHGNSGSV 255
K GK+ R HG G+V
Sbjct: 53 LK-----GKIVRVHGTKGAV 67
>UniRef50_UPI00015B5B14 Cluster: PREDICTED: similar to allergen 5;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
allergen 5 - Nasonia vitripennis
Length = 184
Score = 31.1 bits (67), Expect = 8.7
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 220 KVTRPHGNSGSVEPSSSLTSLPRL-WDTEYE 309
KV R H G+ EP + T++P+L WD E E
Sbjct: 31 KVARGHEQRGNPEPQPAATNMPQLTWDDELE 61
>UniRef50_UPI0000D5766E Cluster: PREDICTED: similar to CG2179-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG2179-PA, isoform A - Tribolium castaneum
Length = 616
Score = 31.1 bits (67), Expect = 8.7
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Frame = +1
Query: 1 GRLYAKAVFTGYK--RGLRNQHENTALLKVEGAKDRN------DAVFYAGKHCVYVYRAK 156
GR+ K + + K R + +T+L E KDRN D +Y + +YVY +
Sbjct: 418 GRVVLKNILSRKKKSRSRSSSSSDTSLSLDEDRKDRNIPEVVYDPTWY--NYPIYVYPPR 475
Query: 157 KRTPIPGGPRGK 192
R P+PG RG+
Sbjct: 476 GRYPLPGPSRGR 487
>UniRef50_UPI0000661128 Cluster: Homolog of Brachydanio rerio
"Prognosticated neural developmental protein.; n=1;
Takifugu rubripes|Rep: Homolog of Brachydanio rerio
"Prognosticated neural developmental protein. - Takifugu
rubripes
Length = 405
Score = 31.1 bits (67), Expect = 8.7
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 17 RPYSQDISVVYATSTRTPLSSR-LKEQKTVMMQSFMLASIASMCTELRRGHQFPEVPVAK 193
RP+S + VV LSSR L+EQ + +M + A +A +C + G+ ++ +++
Sbjct: 317 RPWSVSVLVVVVVLDMAALSSRALQEQLSAIMGALTKAVVAEICELVDEGYALLQMEISR 376
>UniRef50_Q5PLF5 Cluster: Cytosine permease; n=24;
Gammaproteobacteria|Rep: Cytosine permease - Salmonella
paratyphi-a
Length = 417
Score = 31.1 bits (67), Expect = 8.7
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -1
Query: 234 WAGHLAPDSTQLGFFATGTSGNWCPLLSSVHIDA-MLASIKDCIITVFCSFNLEESGVLV 58
W L STQ+G+F G + P+ + IDA +L ++ ++T+ F + +L
Sbjct: 95 WLPSLLLGSTQVGWFGVGVAMFAIPVSKATGIDANILIAVSGLLMTLTIFFGISALTILS 154
Query: 57 LVA 49
+VA
Sbjct: 155 IVA 157
>UniRef50_A0LSI1 Cluster: Cellulose-binding, family II precursor;
n=5; Bacteria|Rep: Cellulose-binding, family II
precursor - Acidothermus cellulolyticus (strain ATCC
43068 / 11B)
Length = 1298
Score = 31.1 bits (67), Expect = 8.7
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +3
Query: 186 WQKNQAACYLGQGDPPTWQLWQCRAKFKSNLPAQAMGHRIRV 311
W N A TWQ+ K N+P + MG R+ V
Sbjct: 138 WDPNDGAILRSSDQGATWQITPLPFKLGGNMPGRGMGERLAV 179
>UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L35Ae -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 106
Score = 31.1 bits (67), Expect = 8.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 4 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVY 141
R+Y + GY+ G Q+E L++V+G DR A G +Y
Sbjct: 7 RVYT-GIILGYRLGSNTQYEKQVLIRVDGVNDRASASRLIGWKVLY 51
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,699,317
Number of Sequences: 1657284
Number of extensions: 8756265
Number of successful extensions: 24173
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 23520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24149
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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