BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00016 (703 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 61 7e-10 SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08 SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08 SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 51 8e-07 SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06 SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 45 5e-05 SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 44 9e-05 SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 44 2e-04 SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 43 2e-04 SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001 SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008 SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 37 0.018 SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032 SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042 SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17 SB_51847| Best HMM Match : Peptidase_S28 (HMM E-Value=2.7e-33) 33 0.22 SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 31 0.68 SB_47462| Best HMM Match : Ras (HMM E-Value=0) 31 0.68 SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 31 1.2 SB_48191| Best HMM Match : ROKNT (HMM E-Value=3.6) 30 2.1 SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13) 30 2.1 SB_30395| Best HMM Match : zf-C2H2 (HMM E-Value=1.6) 30 2.1 SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 29 2.8 SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26) 28 6.4 SB_11692| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4 SB_7967| Best HMM Match : zf-AD (HMM E-Value=3.4) 28 6.4 SB_32167| Best HMM Match : Fucokinase (HMM E-Value=0) 28 8.4 SB_26373| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4 SB_39659| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-27) 28 8.4 SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4 SB_21973| Best HMM Match : XPG_N (HMM E-Value=0.013) 28 8.4 >SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) Length = 642 Score = 61.3 bits (142), Expect = 7e-10 Identities = 24/86 (27%), Positives = 51/86 (59%), Gaps = 4/86 (4%) Frame = +2 Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQQ- 430 +AFFGCCGA +E+ CML+ + I +L+++ L++ V+ ++N D + + + + + + ++ Sbjct: 420 IAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLGYINKDKIQSDLTDDIIRNIKEY 479 Query: 431 ---DQDTFHVIEHRFSCCGPTGPGSY 499 ++ ++ F CCG GP + Sbjct: 480 PKNNKAAIDAMQMDFECCGAKGPSDW 505 >SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 333 Score = 57.2 bits (132), Expect = 1e-08 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 6/103 (5%) Frame = +2 Query: 197 DQLQSSAGGLYDCWGHRFHLAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVN 376 D L A L G F L F GC GA+RE+ C+L +++ + ++ L+L LGV VFV Sbjct: 41 DILTDPAFALIIVGGIMFILGFSGCIGALRENICLLKFFSVVLAIIFFLQLALGVFVFVF 100 Query: 377 LDGVVAAIPNWMNKTFQQDQDTFHV------IEHRFSCCGPTG 487 D V A I + + +D + ++ F CCG G Sbjct: 101 QDKVEAVIVEKLQTAVTKYRDNADLQNLIDGVQQEFKCCGAKG 143 >SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 341 Score = 54.4 bits (125), Expect = 8e-08 Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 4/79 (5%) Frame = +2 Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQ-- 427 +AF GCCGA +E+ CML+ + F+L+L+ L++ G + + N D + + + K + Sbjct: 67 VAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGGALAYNNKDKIENRLDKDILKAIENY 126 Query: 428 --QDQDTFHVIEHRFSCCG 478 +++ + + ++ +F CCG Sbjct: 127 PGKNEKSINDMQTKFKCCG 145 >SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) Length = 286 Score = 51.2 bits (117), Expect = 8e-07 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%) Frame = +2 Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVV---AAIPNWMNKTF 424 + FFGC GA++E+ L +Y IF+ + + GV+ F+ + +V A + + + K++ Sbjct: 86 IVFFGCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAFLQREKLVDPKARLEDGL-KSY 144 Query: 425 QQD---QDTFHVIEHRFSCCG 478 QQD Q+ I+ RF CCG Sbjct: 145 QQDSSKQEFIDFIQTRFKCCG 165 >SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 514 Score = 50.8 bits (116), Expect = 1e-06 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%) Frame = +2 Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTF--- 424 ++FFGCCGAI+E C+L T+ + +++A+++T + +V + V + MN T Sbjct: 339 VSFFGCCGAIKEHRCLLATFFALLFIILAVEITGTALGYVYRNKVEEQLGKDMNDTIVSY 398 Query: 425 -----QQDQDTFHVIEHRFSCCGPTG 487 + D + I+ + CCG G Sbjct: 399 GEKGKEGITDAYDAIQKKEKCCGING 424 >SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) Length = 280 Score = 45.2 bits (102), Expect = 5e-05 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Frame = +2 Query: 248 FHLAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMN--KT 421 F + FFGC GA+RE+ C L Y + + + L + G + + D V A K Sbjct: 89 FFIGFFGCVGALRENTCFLTVYGTSVFLCLILLIACGAVAYTQKDKVQALKERLKQDLKK 148 Query: 422 FQQD---QDTFHVIEHRFSCCG 478 + D QD ++ CCG Sbjct: 149 YLDDPLNQDLIDFMQTLLKCCG 170 >SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) Length = 252 Score = 44.4 bits (100), Expect = 9e-05 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%) Frame = +2 Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFV-------NLDGVVAAIPNWM 412 +AF CCGA++ES CML TY + + L++T V+ +V NL G + + N Sbjct: 72 VAFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEKNLHGDIRSTMNEY 131 Query: 413 NKTFQQDQDTFHVIE-HR-FSCCG 478 + + D T + E HR F CCG Sbjct: 132 HLS-GHDAVTRAIDEIHRDFKCCG 154 >SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) Length = 299 Score = 43.6 bits (98), Expect = 2e-04 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Frame = +2 Query: 248 FHLAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQ 427 F +A GC GA+RE+ +L Y + + + L ++ G V+++ D VVA + + + Sbjct: 93 FLIATVGCIGALRENTILLAIYGGAVTLCLILLVSAGTAVYIHRDKVVAKLKDDLQHYRD 152 Query: 428 QDQDTFHVIEHR----FSCCG 478 D++ F + R CCG Sbjct: 153 PDKENFQFLIDRLQTNLKCCG 173 >SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) Length = 211 Score = 43.2 bits (97), Expect = 2e-04 Identities = 15/39 (38%), Positives = 28/39 (71%) Frame = +2 Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVF 370 ++FFGC GA +E+ CML T+ + +L+L+ L++ V+ + Sbjct: 69 VSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAY 107 >SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 296 Score = 40.3 bits (90), Expect = 0.001 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Frame = +2 Query: 248 FHLAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQ 427 F +A GC GA+RE+ +L Y + + + ++ G+ V+++ D VV + + + Sbjct: 93 FLIATVGCIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYMHQDKVVEKLKDDLKHYRD 152 Query: 428 QDQDTFHVIEHR----FSCCG 478 D++ F + R CCG Sbjct: 153 PDKENFQFLIDRLQTNLKCCG 173 >SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 426 Score = 37.9 bits (84), Expect = 0.008 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = +2 Query: 254 LAFFGCCGAIRESNCMLVT 310 + FFGCCGA++ES CML T Sbjct: 327 VGFFGCCGAVKESRCMLAT 345 >SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) Length = 187 Score = 36.7 bits (81), Expect = 0.018 Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 3/52 (5%) Frame = +2 Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLV---LMALKLTLGVMVFVNLDGVVAAI 400 + F GCCGA++E C+L T +I ++ + A K++L + +++ GV+ + Sbjct: 88 IGFIGCCGALKEHTCLLKTVSIKSILYGYMYAKKISLTIRIYLQF-GVILGL 138 >SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 140 Score = 35.9 bits (79), Expect = 0.032 Identities = 12/17 (70%), Positives = 16/17 (94%) Frame = +2 Query: 254 LAFFGCCGAIRESNCML 304 ++FFGCCGAI+ES C+L Sbjct: 39 ISFFGCCGAIKESRCLL 55 >SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 313 Score = 35.5 bits (78), Expect = 0.042 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +2 Query: 239 GHRFHLAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLD 382 G F + FGC GA+RE+ C+L Y +++A + G + F D Sbjct: 112 GLLFVITIFGCIGALRENRCLLTAYIWMCGIILAGMIVCGGLGFYYKD 159 >SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 316 Score = 33.5 bits (73), Expect = 0.17 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = +2 Query: 266 GCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLD 382 G C + + C+L TY FML+L+ ++T+ V + + D Sbjct: 36 GVCALLYMNPCLLKTYFSFMLILVVAEVTIAVYLLIEKD 74 >SB_51847| Best HMM Match : Peptidase_S28 (HMM E-Value=2.7e-33) Length = 1224 Score = 33.1 bits (72), Expect = 0.22 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 341 LKLTLGVMVFVNLDGVVAA-IPNWMNKTFQQDQDTFHVIE 457 +K+ +G++VFV + VAA IP + TF+Q D F+ I+ Sbjct: 1 MKIKIGLLVFVGIISFVAAEIPQFKTGTFEQTVDHFNFIQ 40 >SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) Length = 919 Score = 31.5 bits (68), Expect = 0.68 Identities = 11/36 (30%), Positives = 23/36 (63%) Frame = +2 Query: 266 GCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFV 373 GC I+E+ +LV+Y I ++++ L++ GV+ + Sbjct: 77 GCVAVIKENRFILVSYLIMLVLIFILEIATGVVAVI 112 >SB_47462| Best HMM Match : Ras (HMM E-Value=0) Length = 385 Score = 31.5 bits (68), Expect = 0.68 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = +2 Query: 254 LAFFGCCGAIRESNCMLVT 310 + F GCCGA++E C+L T Sbjct: 230 IGFIGCCGALKEHTCLLKT 248 >SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) Length = 669 Score = 30.7 bits (66), Expect = 1.2 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +2 Query: 254 LAFFGCCGAIRESNCMLV 307 + F GCCGA++E+ C L+ Sbjct: 212 IGFVGCCGAVKENKCFLL 229 >SB_48191| Best HMM Match : ROKNT (HMM E-Value=3.6) Length = 259 Score = 29.9 bits (64), Expect = 2.1 Identities = 16/67 (23%), Positives = 30/67 (44%) Frame = -1 Query: 460 MLDDMERILVLLEGLVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPD 281 +L+ +R L L+E + + S E + A G + +H+ ED+ D L + Sbjct: 128 LLEKFQRNLALMEHAAAGQEEPVSASAESNGDQAAGGDQEASEHEMEDKTSDNTRAVLEE 187 Query: 280 GTAASEE 260 G+ E+ Sbjct: 188 GSLNVED 194 >SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13) Length = 3035 Score = 29.9 bits (64), Expect = 2.1 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +1 Query: 376 SRRSSCCYPELDEQDLPA 429 SR+S+CC PE ++DLPA Sbjct: 2267 SRKSTCCAPEFCKRDLPA 2284 >SB_30395| Best HMM Match : zf-C2H2 (HMM E-Value=1.6) Length = 755 Score = 29.9 bits (64), Expect = 2.1 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%) Frame = -1 Query: 415 VHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVA--LPDGTAASEECKMKAM 242 V P+ + S +H H YA + Q Q ++ GDK ++ L +G EE +K Sbjct: 196 VCPLNEDHPASTVLHDHCYANRKPTFQQQQEDNITGDKSFLSSLLGNGYFEHEESNVKV- 254 Query: 241 PPTIIQATGATLKLVSDSTVSMSANCK 161 + ATG S T+S S++ K Sbjct: 255 --RVEGATGNNDGPASQETISSSSSEK 279 >SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) Length = 1118 Score = 29.5 bits (63), Expect = 2.8 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 2/77 (2%) Frame = -2 Query: 624 DRADSNAIVIEECLQDFGAAGVRVDYRTGGRRAA--RIGQGKDRYEPGPVGPQQLNLCSM 451 D D++ V E ++ + V++ GG R++ R +G+D+Y P P ++ + ++ Sbjct: 45 DDRDADDAVYECNGKEMLGERILVEHSRGGARSSSSRPSRGRDKYGPPVRTPWRMTIENL 104 Query: 450 TWNVSWSCWKVLFIQFG 400 + VSW K Q G Sbjct: 105 SSRVSWQDLKDFCRQVG 121 >SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26) Length = 589 Score = 28.3 bits (60), Expect = 6.4 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -1 Query: 418 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHE-DRVGDKHAVALPDG 278 L+ P + SSN++ + H+ + H H+H+ + V D+ V + DG Sbjct: 489 LLTPSKPSSNHNHYHRRRHHHRNYRHNHHHRHQHNEVMDEGKVVINDG 536 >SB_11692| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 155 Score = 28.3 bits (60), Expect = 6.4 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -2 Query: 630 DGD-RADSNAIVIEECLQDFGAAGVRVDYRTGGRRAA 523 DGD D N+I I+E + FG+A R + RRAA Sbjct: 25 DGDWGTDGNSIAIDESVVTFGSARSRPNQTRKNRRAA 61 >SB_7967| Best HMM Match : zf-AD (HMM E-Value=3.4) Length = 837 Score = 28.3 bits (60), Expect = 6.4 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 2/87 (2%) Frame = -1 Query: 415 VHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVA--LPDGTAASEECKMKAM 242 V P+ + S +H H YA + Q Q ++ GDK ++ L +G E+ +K Sbjct: 244 VCPLNEDHPASAVLHDHCYANRKPTFQQQQEDNITGDKSFLSSLLGNGYFEHEKSNVKV- 302 Query: 241 PPTIIQATGATLKLVSDSTVSMSANCK 161 + ATG S T+S S++ K Sbjct: 303 --RVEGATGNNDGPASQETISSSSSEK 327 >SB_32167| Best HMM Match : Fucokinase (HMM E-Value=0) Length = 495 Score = 27.9 bits (59), Expect = 8.4 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +1 Query: 238 GASLSSCILRMLRCHQGEQLHACHLRDLHAG 330 G S CI +LR H E+L C + HAG Sbjct: 91 GGSTMICIDELLRIHGEEKLSECKIMLAHAG 121 >SB_26373| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 176 Score = 27.9 bits (59), Expect = 8.4 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = -2 Query: 648 FNGGDHDGD-RADSNAIVIEECLQDFGAAGVRVD 550 +N G+ DG R +A+V+ + ++D G VR+D Sbjct: 142 YNAGEPDGRVRPKLSALVLSQAMRDIGVKFVRID 175 >SB_39659| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-27) Length = 334 Score = 27.9 bits (59), Expect = 8.4 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 8/80 (10%) Frame = +2 Query: 284 RESNCMLVTYAIFMLVLMALKLTLG---VMVFVNLDGVVA---AIPNWMN--KTFQQDQD 439 +++ + + + F L+A+ TLG M VN+ VV I ++ K ++ Q Sbjct: 144 KKAIAVCIVFWAFSFFLVAIWYTLGNKIYMFIVNVCIVVLFGITIVSYFKIYKVIKRHQT 203 Query: 440 TFHVIEHRFSCCGPTGPGSY 499 HV+E + CG TG ++ Sbjct: 204 QIHVVESSVTACGETGSNAH 223 >SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 641 Score = 27.9 bits (59), Expect = 8.4 Identities = 16/65 (24%), Positives = 29/65 (44%) Frame = -1 Query: 361 YAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEECKMKAMPPTIIQATGATLKLVSDSTV 182 +++GQ Q ++ H R D+ + PD T ++ A ATL +TV Sbjct: 390 WSRGQMQLQRYDHVPRCNDQGMITCPDATTKDVS---STETVSVTSAPTATLTSAPTATV 446 Query: 181 SMSAN 167 + +A+ Sbjct: 447 TPTAS 451 >SB_21973| Best HMM Match : XPG_N (HMM E-Value=0.013) Length = 611 Score = 27.9 bits (59), Expect = 8.4 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = -2 Query: 648 FNGGDHDGD-RADSNAIVIEECLQDFGAAGVRVD 550 +N G+ DG R +A+V+ + ++D G VR+D Sbjct: 100 YNAGEPDGRVRPKLSALVLSQAMRDIGVKFVRID 133 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,650,278 Number of Sequences: 59808 Number of extensions: 460110 Number of successful extensions: 1558 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 1306 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1538 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1841633001 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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