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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00016
         (703 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)            61   7e-10
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)              57   1e-08
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)               54   8e-08
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)          51   8e-07
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)              51   1e-06
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)                45   5e-05
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)                44   9e-05
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)                44   2e-04
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)      43   2e-04
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.001
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.008
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)             37   0.018
SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.032
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.042
SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.17 
SB_51847| Best HMM Match : Peptidase_S28 (HMM E-Value=2.7e-33)         33   0.22 
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)          31   0.68 
SB_47462| Best HMM Match : Ras (HMM E-Value=0)                         31   0.68 
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)                 31   1.2  
SB_48191| Best HMM Match : ROKNT (HMM E-Value=3.6)                     30   2.1  
SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13)                   30   2.1  
SB_30395| Best HMM Match : zf-C2H2 (HMM E-Value=1.6)                   30   2.1  
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)                 29   2.8  
SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26)                    28   6.4  
SB_11692| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_7967| Best HMM Match : zf-AD (HMM E-Value=3.4)                      28   6.4  
SB_32167| Best HMM Match : Fucokinase (HMM E-Value=0)                  28   8.4  
SB_26373| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.4  
SB_39659| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-27)                 28   8.4  
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.4  
SB_21973| Best HMM Match : XPG_N (HMM E-Value=0.013)                   28   8.4  

>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
          Length = 642

 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 24/86 (27%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
 Frame = +2

Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQQ- 430
           +AFFGCCGA +E+ CML+ + I +L+++ L++   V+ ++N D + + + + + +  ++ 
Sbjct: 420 IAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLGYINKDKIQSDLTDDIIRNIKEY 479

Query: 431 ---DQDTFHVIEHRFSCCGPTGPGSY 499
              ++     ++  F CCG  GP  +
Sbjct: 480 PKNNKAAIDAMQMDFECCGAKGPSDW 505


>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 333

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
 Frame = +2

Query: 197 DQLQSSAGGLYDCWGHRFHLAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVN 376
           D L   A  L    G  F L F GC GA+RE+ C+L  +++ + ++  L+L LGV VFV 
Sbjct: 41  DILTDPAFALIIVGGIMFILGFSGCIGALRENICLLKFFSVVLAIIFFLQLALGVFVFVF 100

Query: 377 LDGVVAAIPNWMNKTFQQDQDTFHV------IEHRFSCCGPTG 487
            D V A I   +     + +D   +      ++  F CCG  G
Sbjct: 101 QDKVEAVIVEKLQTAVTKYRDNADLQNLIDGVQQEFKCCGAKG 143


>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 341

 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
 Frame = +2

Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQ-- 427
           +AF GCCGA +E+ CML+ +  F+L+L+ L++  G + + N D +   +   + K  +  
Sbjct: 67  VAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGGALAYNNKDKIENRLDKDILKAIENY 126

Query: 428 --QDQDTFHVIEHRFSCCG 478
             +++ + + ++ +F CCG
Sbjct: 127 PGKNEKSINDMQTKFKCCG 145


>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
          Length = 286

 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
 Frame = +2

Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVV---AAIPNWMNKTF 424
           + FFGC GA++E+   L +Y IF+   +   +  GV+ F+  + +V   A + + + K++
Sbjct: 86  IVFFGCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAFLQREKLVDPKARLEDGL-KSY 144

Query: 425 QQD---QDTFHVIEHRFSCCG 478
           QQD   Q+    I+ RF CCG
Sbjct: 145 QQDSSKQEFIDFIQTRFKCCG 165


>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 514

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
 Frame = +2

Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTF--- 424
           ++FFGCCGAI+E  C+L T+   + +++A+++T   + +V  + V   +   MN T    
Sbjct: 339 VSFFGCCGAIKEHRCLLATFFALLFIILAVEITGTALGYVYRNKVEEQLGKDMNDTIVSY 398

Query: 425 -----QQDQDTFHVIEHRFSCCGPTG 487
                +   D +  I+ +  CCG  G
Sbjct: 399 GEKGKEGITDAYDAIQKKEKCCGING 424


>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
          Length = 280

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = +2

Query: 248 FHLAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMN--KT 421
           F + FFGC GA+RE+ C L  Y   + + + L +  G + +   D V A         K 
Sbjct: 89  FFIGFFGCVGALRENTCFLTVYGTSVFLCLILLIACGAVAYTQKDKVQALKERLKQDLKK 148

Query: 422 FQQD---QDTFHVIEHRFSCCG 478
           +  D   QD    ++    CCG
Sbjct: 149 YLDDPLNQDLIDFMQTLLKCCG 170


>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
          Length = 252

 Score = 44.4 bits (100), Expect = 9e-05
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
 Frame = +2

Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFV-------NLDGVVAAIPNWM 412
           +AF  CCGA++ES CML TY   +  +  L++T  V+ +V       NL G + +  N  
Sbjct: 72  VAFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEKNLHGDIRSTMNEY 131

Query: 413 NKTFQQDQDTFHVIE-HR-FSCCG 478
           + +   D  T  + E HR F CCG
Sbjct: 132 HLS-GHDAVTRAIDEIHRDFKCCG 154


>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
          Length = 299

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
 Frame = +2

Query: 248 FHLAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQ 427
           F +A  GC GA+RE+  +L  Y   + + + L ++ G  V+++ D VVA + + +     
Sbjct: 93  FLIATVGCIGALRENTILLAIYGGAVTLCLILLVSAGTAVYIHRDKVVAKLKDDLQHYRD 152

Query: 428 QDQDTFHVIEHR----FSCCG 478
            D++ F  +  R      CCG
Sbjct: 153 PDKENFQFLIDRLQTNLKCCG 173


>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
          Length = 211

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 15/39 (38%), Positives = 28/39 (71%)
 Frame = +2

Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVF 370
           ++FFGC GA +E+ CML T+ + +L+L+ L++   V+ +
Sbjct: 69  VSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAY 107


>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 296

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
 Frame = +2

Query: 248 FHLAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQ 427
           F +A  GC GA+RE+  +L  Y   + + +   ++ G+ V+++ D VV  + + +     
Sbjct: 93  FLIATVGCIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYMHQDKVVEKLKDDLKHYRD 152

Query: 428 QDQDTFHVIEHR----FSCCG 478
            D++ F  +  R      CCG
Sbjct: 153 PDKENFQFLIDRLQTNLKCCG 173


>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 426

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +2

Query: 254 LAFFGCCGAIRESNCMLVT 310
           + FFGCCGA++ES CML T
Sbjct: 327 VGFFGCCGAVKESRCMLAT 345


>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
          Length = 187

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
 Frame = +2

Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLV---LMALKLTLGVMVFVNLDGVVAAI 400
           + F GCCGA++E  C+L T +I  ++   + A K++L + +++   GV+  +
Sbjct: 88  IGFIGCCGALKEHTCLLKTVSIKSILYGYMYAKKISLTIRIYLQF-GVILGL 138


>SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 140

 Score = 35.9 bits (79), Expect = 0.032
 Identities = 12/17 (70%), Positives = 16/17 (94%)
 Frame = +2

Query: 254 LAFFGCCGAIRESNCML 304
           ++FFGCCGAI+ES C+L
Sbjct: 39  ISFFGCCGAIKESRCLL 55


>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 313

 Score = 35.5 bits (78), Expect = 0.042
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +2

Query: 239 GHRFHLAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLD 382
           G  F +  FGC GA+RE+ C+L  Y     +++A  +  G + F   D
Sbjct: 112 GLLFVITIFGCIGALRENRCLLTAYIWMCGIILAGMIVCGGLGFYYKD 159


>SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 316

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 266 GCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLD 382
           G C  +  + C+L TY  FML+L+  ++T+ V + +  D
Sbjct: 36  GVCALLYMNPCLLKTYFSFMLILVVAEVTIAVYLLIEKD 74


>SB_51847| Best HMM Match : Peptidase_S28 (HMM E-Value=2.7e-33)
          Length = 1224

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +2

Query: 341 LKLTLGVMVFVNLDGVVAA-IPNWMNKTFQQDQDTFHVIE 457
           +K+ +G++VFV +   VAA IP +   TF+Q  D F+ I+
Sbjct: 1   MKIKIGLLVFVGIISFVAAEIPQFKTGTFEQTVDHFNFIQ 40


>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
          Length = 919

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +2

Query: 266 GCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFV 373
           GC   I+E+  +LV+Y I ++++  L++  GV+  +
Sbjct: 77  GCVAVIKENRFILVSYLIMLVLIFILEIATGVVAVI 112


>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
          Length = 385

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 254 LAFFGCCGAIRESNCMLVT 310
           + F GCCGA++E  C+L T
Sbjct: 230 IGFIGCCGALKEHTCLLKT 248


>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
          Length = 669

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 254 LAFFGCCGAIRESNCMLV 307
           + F GCCGA++E+ C L+
Sbjct: 212 IGFVGCCGAVKENKCFLL 229


>SB_48191| Best HMM Match : ROKNT (HMM E-Value=3.6)
          Length = 259

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/67 (23%), Positives = 30/67 (44%)
 Frame = -1

Query: 460 MLDDMERILVLLEGLVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPD 281
           +L+  +R L L+E       +  + S E +    A G  +  +H+ ED+  D     L +
Sbjct: 128 LLEKFQRNLALMEHAAAGQEEPVSASAESNGDQAAGGDQEASEHEMEDKTSDNTRAVLEE 187

Query: 280 GTAASEE 260
           G+   E+
Sbjct: 188 GSLNVED 194


>SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13)
          Length = 3035

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 376  SRRSSCCYPELDEQDLPA 429
            SR+S+CC PE  ++DLPA
Sbjct: 2267 SRKSTCCAPEFCKRDLPA 2284


>SB_30395| Best HMM Match : zf-C2H2 (HMM E-Value=1.6)
          Length = 755

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
 Frame = -1

Query: 415 VHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVA--LPDGTAASEECKMKAM 242
           V P+ +    S  +H H YA  +    Q Q ++  GDK  ++  L +G    EE  +K  
Sbjct: 196 VCPLNEDHPASTVLHDHCYANRKPTFQQQQEDNITGDKSFLSSLLGNGYFEHEESNVKV- 254

Query: 241 PPTIIQATGATLKLVSDSTVSMSANCK 161
              +  ATG      S  T+S S++ K
Sbjct: 255 --RVEGATGNNDGPASQETISSSSSEK 279


>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
          Length = 1118

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = -2

Query: 624 DRADSNAIVIEECLQDFGAAGVRVDYRTGGRRAA--RIGQGKDRYEPGPVGPQQLNLCSM 451
           D  D++  V E   ++     + V++  GG R++  R  +G+D+Y P    P ++ + ++
Sbjct: 45  DDRDADDAVYECNGKEMLGERILVEHSRGGARSSSSRPSRGRDKYGPPVRTPWRMTIENL 104

Query: 450 TWNVSWSCWKVLFIQFG 400
           +  VSW   K    Q G
Sbjct: 105 SSRVSWQDLKDFCRQVG 121


>SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26)
          Length = 589

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 418 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHE-DRVGDKHAVALPDG 278
           L+ P + SSN++    + H+ +     H H+H+ + V D+  V + DG
Sbjct: 489 LLTPSKPSSNHNHYHRRRHHHRNYRHNHHHRHQHNEVMDEGKVVINDG 536


>SB_11692| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 155

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 630 DGD-RADSNAIVIEECLQDFGAAGVRVDYRTGGRRAA 523
           DGD   D N+I I+E +  FG+A  R +     RRAA
Sbjct: 25  DGDWGTDGNSIAIDESVVTFGSARSRPNQTRKNRRAA 61


>SB_7967| Best HMM Match : zf-AD (HMM E-Value=3.4)
          Length = 837

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
 Frame = -1

Query: 415 VHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVA--LPDGTAASEECKMKAM 242
           V P+ +    S  +H H YA  +    Q Q ++  GDK  ++  L +G    E+  +K  
Sbjct: 244 VCPLNEDHPASAVLHDHCYANRKPTFQQQQEDNITGDKSFLSSLLGNGYFEHEKSNVKV- 302

Query: 241 PPTIIQATGATLKLVSDSTVSMSANCK 161
              +  ATG      S  T+S S++ K
Sbjct: 303 --RVEGATGNNDGPASQETISSSSSEK 327


>SB_32167| Best HMM Match : Fucokinase (HMM E-Value=0)
          Length = 495

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 238 GASLSSCILRMLRCHQGEQLHACHLRDLHAG 330
           G S   CI  +LR H  E+L  C +   HAG
Sbjct: 91  GGSTMICIDELLRIHGEEKLSECKIMLAHAG 121


>SB_26373| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 176

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -2

Query: 648 FNGGDHDGD-RADSNAIVIEECLQDFGAAGVRVD 550
           +N G+ DG  R   +A+V+ + ++D G   VR+D
Sbjct: 142 YNAGEPDGRVRPKLSALVLSQAMRDIGVKFVRID 175


>SB_39659| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-27)
          Length = 334

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
 Frame = +2

Query: 284 RESNCMLVTYAIFMLVLMALKLTLG---VMVFVNLDGVVA---AIPNWMN--KTFQQDQD 439
           +++  + + +  F   L+A+  TLG    M  VN+  VV     I ++    K  ++ Q 
Sbjct: 144 KKAIAVCIVFWAFSFFLVAIWYTLGNKIYMFIVNVCIVVLFGITIVSYFKIYKVIKRHQT 203

Query: 440 TFHVIEHRFSCCGPTGPGSY 499
             HV+E   + CG TG  ++
Sbjct: 204 QIHVVESSVTACGETGSNAH 223


>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 641

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 16/65 (24%), Positives = 29/65 (44%)
 Frame = -1

Query: 361 YAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEECKMKAMPPTIIQATGATLKLVSDSTV 182
           +++GQ Q  ++ H  R  D+  +  PD T             ++  A  ATL     +TV
Sbjct: 390 WSRGQMQLQRYDHVPRCNDQGMITCPDATTKDVS---STETVSVTSAPTATLTSAPTATV 446

Query: 181 SMSAN 167
           + +A+
Sbjct: 447 TPTAS 451


>SB_21973| Best HMM Match : XPG_N (HMM E-Value=0.013)
          Length = 611

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -2

Query: 648 FNGGDHDGD-RADSNAIVIEECLQDFGAAGVRVD 550
           +N G+ DG  R   +A+V+ + ++D G   VR+D
Sbjct: 100 YNAGEPDGRVRPKLSALVLSQAMRDIGVKFVRID 133


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,650,278
Number of Sequences: 59808
Number of extensions: 460110
Number of successful extensions: 1558
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1538
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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