Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00016
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 46 3e-05
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 42 6e-04
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 38 0.005
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 36 0.037
Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein. 35 0.065
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 33 0.26
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 32 0.35
AL032626-11|CAC44300.1| 140|Caenorhabditis elegans Hypothetical... 29 2.4
AL032626-10|CAA21531.1| 458|Caenorhabditis elegans Hypothetical... 29 2.4
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 29 2.4
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 29 2.4
AF125952-3|AAD14699.1| 475|Caenorhabditis elegans Hypothetical ... 29 3.2
AC006722-9|ABP57813.1| 475|Caenorhabditis elegans Hypothetical ... 29 3.2
AC006708-19|AAF60423.3| 588|Caenorhabditis elegans Mtm (myotubu... 28 5.6
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 24 6.6
AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical... 28 7.4
Z81463-3|CAB03847.1| 307|Caenorhabditis elegans Hypothetical pr... 27 9.8
U13019-7|AAC24445.2| 689|Caenorhabditis elegans Hypothetical pr... 27 9.8
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQQD 433
+ F G GA+ S +L Y +FM++L L++ +G+ V V V + ++ +F +
Sbjct: 84 IGFVGVIGAVIRSKYLLAPYFLFMVILFLLEIAIGITVLVKRRSVRRTVKEYVFDSFNMN 143
Query: 434 -QDTFHVIEHRFSCCG 478
Q R++CCG
Sbjct: 144 AQADISAFNFRYNCCG 159
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +2
Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQQD 433
L F GCCGAIRE+ C+ V++A+ + +L+ ++ ++ + D I N + +
Sbjct: 66 LGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRY 125
Query: 434 QDTFHV------IEHRFSCCGPTGPGSYLS 505
++ V F CCG T +L+
Sbjct: 126 HESRGVESAWDKTHQLFECCGVTNSSDWLT 155
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 248 FHLAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKT-- 421
F + FFGCCGA ES +L + +++L A++L V N + V++I + K+
Sbjct: 79 FLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSSIQQVLKKSSA 138
Query: 422 FQQDQDTFHVIEHRFSCCGPT 484
+ + I++ F CCG T
Sbjct: 139 TYELRKNIKPIQNVFQCCGAT 159
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Frame = +2
Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIP---NWMNKTF 424
+A GCCG S L+ Y++ + +L+ L+ G+ + DG+ + N+M + +
Sbjct: 127 VAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDVELSDALNYMVQHY 186
Query: 425 QQD----QDTFHVIEHRFSCCGPTG 487
Q Q++ ++ F CCG G
Sbjct: 187 YQGPGVVQESLDHLQTAFRCCGNAG 211
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Frame = +2
Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQQD 433
+ +FGC GA + + C L + +++ L+L V +F + + + + M T +
Sbjct: 70 VGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIRNR 129
Query: 434 -------QDTFHVIEHRFSCCG 478
+D F ++ +F CCG
Sbjct: 130 YSSETAFKDAFDTVQEKFECCG 151
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +2
Query: 248 FHLAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKT-- 421
F + F GC G++RE+ L Y+ + +L+ + + GV + D + I N +N
Sbjct: 96 FIIGFSGCVGSLRENTSFLTFYSTLLGLLLIAEFSAGVFAYACRDQLDNYIRNLLNDVVV 155
Query: 422 -FQQDQDTFHVI---EHRFSCCGPTG 487
++ D D +I + + CCG G
Sbjct: 156 GYRDDPDLQLLIDSMQETWMCCGING 181
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 35.5 bits (78), Expect = 0.037
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = +2
Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVN 376
+AF GCCGA +E +L Y+ +++++A+++ + F++
Sbjct: 96 VAFLGCCGAAKEWRPLLCCYSSCLMLILAIQIAATIYAFLH 136
>Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein.
Length = 395
Score = 34.7 bits (76), Expect = 0.065
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 254 LAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIP 403
+A GCCG S L+ Y++ + +L+ L+ G+ + DG P
Sbjct: 238 VAMXGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGETPVAP 287
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 32.7 bits (71), Expect = 0.26
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 12/113 (10%)
Frame = +2
Query: 203 LQSSAGGLYDCWGHRFHLAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVM------ 364
L++SA C + + F G CGA+ S +L+ + +F++ + +G +
Sbjct: 23 LKASAYVSLVCGCAQLLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKD 82
Query: 365 ----VFVNLDGVVAAIPNWMNKTFQQDQDTFHVIEHRF--SCCGPTGPGSYLS 505
V N+ +V + M + T + + +F CCG GP Y+S
Sbjct: 83 KVYSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDYIS 135
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 331 VDGTETDLGRNGVCESRRSSCCYPELDEQDLP 426
+DG+ D+ +G C +R+S+C DE+ +P
Sbjct: 288 IDGSVIDIAHSGACRARKSTCITCPKDEKKIP 319
>AL032626-11|CAC44300.1| 140|Caenorhabditis elegans Hypothetical
protein Y37D8A.12b protein.
Length = 140
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 390 TTPSRFTNTITPKV-SFSAINTSMKIA*VTSMQLLSLMAPQHPKNAR*KRCPQQSY 226
T P++ N P S +N + A T + L+S +PQ KN CP +Y
Sbjct: 40 TAPTKSPNATAPAGNSTKNVNVTAPAANTTQLALVSSASPQTCKNGNGTHCPSCAY 95
>AL032626-10|CAA21531.1| 458|Caenorhabditis elegans Hypothetical
protein Y37D8A.12a protein.
Length = 458
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 390 TTPSRFTNTITPKV-SFSAINTSMKIA*VTSMQLLSLMAPQHPKNAR*KRCPQQSY 226
T P++ N P S +N + A T + L+S +PQ KN CP +Y
Sbjct: 40 TAPTKSPNATAPAGNSTKNVNVTAPAANTTQLALVSSASPQTCKNGNGTHCPSCAY 95
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Frame = +2
Query: 254 LAFFGCCGAIRESNCMLVTYA--IFMLVLMALKLTLGVMVFVNLDGVVAAIPNWM----N 415
++FFG GA+R++ +L +A +F+ ++ + +TL D NW+
Sbjct: 86 VSFFGFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAV 145
Query: 416 KTFQQDQDTFHV---IEHRFSCCG 478
K + +++ + ++ CCG
Sbjct: 146 KNYHTNRNLAEIMDALQENLECCG 169
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Frame = +2
Query: 254 LAFFGCCGAIRESNCMLVTYA--IFMLVLMALKLTLGVMVFVNLDGVVAAIPNWM----N 415
++FFG GA+R++ +L +A +F+ ++ + +TL D NW+
Sbjct: 110 VSFFGFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAV 169
Query: 416 KTFQQDQDTFHV---IEHRFSCCG 478
K + +++ + ++ CCG
Sbjct: 170 KNYHTNRNLAEIMDALQENLECCG 193
>AF125952-3|AAD14699.1| 475|Caenorhabditis elegans Hypothetical
protein C01B4.7 protein.
Length = 475
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 239 GHRFHLAFFGCCGAIRESNCML-VTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMN 415
G R L+F G C + L VTY+ +++V + +G+ V + + GV+ + W
Sbjct: 116 GVRLTLSFCGLCSTLGTFFTPLAVTYSFYLVVFCRVLQGIGISVILTVLGVIPSY--WSP 173
Query: 416 KT 421
KT
Sbjct: 174 KT 175
>AC006722-9|ABP57813.1| 475|Caenorhabditis elegans Hypothetical
protein Y19D10A.4 protein.
Length = 475
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 239 GHRFHLAFFGCCGAIRESNCML-VTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMN 415
G R L+F G C + L VTY+ +++V + +G+ V + + GV+ + W
Sbjct: 116 GVRLTLSFCGLCSTLGTFFTPLAVTYSFYLVVFCRVLQGIGISVILTVLGVIPSY--WSP 173
Query: 416 KT 421
KT
Sbjct: 174 KT 175
>AC006708-19|AAF60423.3| 588|Caenorhabditis elegans Mtm
(myotubularin) family protein 1 protein.
Length = 588
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -2
Query: 540 GGRRAARIGQGKDRYEPGPVGPQQLNLCSMTWNV 439
G + RIG G D Y G P + C W +
Sbjct: 418 GHKFGERIGHGDDNYSDGERSPVFVQFCDCLWQI 451
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 24.2 bits (50), Expect(2) = 6.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 340 CHQHQHEDRVGDKHAVALPDGTAASEECKMKAMPPTIIQATGATLKLVSD 191
CH H++ V D+H SEE K + ++A+ A L LV+D
Sbjct: 196 CHSHENGHIVADEHRHLNEHDHEHSEEKKQQVEGLKDVKAS-AYLNLVAD 244
Score = 22.2 bits (45), Expect(2) = 6.6
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = -1
Query: 433 VLLEGLVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHE 320
+L + L+H + S + H HH + H H H+
Sbjct: 126 LLGDALLHIIPHSLSPHDHSHDHHDHNHSHKEHDHSHD 163
>AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical
protein F45C12.3 protein.
Length = 470
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 695 LRAWFARHRAKMTATNSMAAITMATEPIA 609
++ WF RH+AK + TN +T EP A
Sbjct: 163 IKQWFWRHKAKQSTTNYQQRVT--AEPYA 189
>Z81463-3|CAB03847.1| 307|Caenorhabditis elegans Hypothetical
protein C06B8.4 protein.
Length = 307
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 281 IRESNCMLVTYAIFMLVLMALKLTLGVMVFVN 376
I++S+ + Y ML+ LK+ +GV+ F+N
Sbjct: 26 IKKSSSSMANYKYLMLISSFLKVFIGVLHFIN 57
>U13019-7|AAC24445.2| 689|Caenorhabditis elegans Hypothetical
protein T12A2.6 protein.
Length = 689
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 329 VLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQQDQDTFHVIEHR 463
VL+ TLG F L + IP MN +++D + + EHR
Sbjct: 210 VLVTCHHTLGPENFGKLGDFLEIIPFQMNGMYRKDSEFLYFYEHR 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,594,599
Number of Sequences: 27780
Number of extensions: 336207
Number of successful extensions: 1032
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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