Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00013
         (590 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    27   0.12 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   0.84 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.5  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   2.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.4  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   3.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.8  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.8  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 367 YYCHPTYEVSVYTIWSGQPWNRMFGNLTLI 456
           Y+    Y++  Y  W  + W+    NL L+
Sbjct: 61  YFISNVYQILAYNFWKKKYWSEFLANLKLL 90


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 370 YCHPTYEVSVYTIWSGQPWNRMFGNL 447
           YC   Y + V T +  + W R+  NL
Sbjct: 76  YCFNYYVIVVTTFYKRRTWTRLLKNL 101


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 199 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRYGLEGP 89
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 199 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRYGLEGP 89
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 289 QTRRNPEWRMRT 254
           QTRRNP +R RT
Sbjct: 226 QTRRNPYYRPRT 237


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/29 (34%), Positives = 11/29 (37%)
 Frame = +1

Query: 1   CNSGTGATTCSSTHPYTDGTCCPYTALCS 87
           C   T   TC   + YT   C  Y   CS
Sbjct: 76  CQDHTTHYTCHCPYGYTGKDCGEYVDWCS 104


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 230 RNPSLKQQCSHTPFWVSPCL 289
           R P  +Q+ SH P W   C+
Sbjct: 42  RQPYPRQKKSHPPQWTWQCI 61


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = +1

Query: 1   CNSGTGATTCSSTHPYTDGTCCPYTALC 84
           C +G    TCS    + D T C     C
Sbjct: 132 CKNGWKGKTCSLKDSHCDHTTCKNGGTC 159


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 177 VPELVLEQSSAPSSSAMPGTPPS 245
           VP+ V E +  PSS+  P  PPS
Sbjct: 393 VPQPVEEVTQKPSSTKAP-APPS 414


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 195 EQSSAPSSSAMPGTPPSSSSVLIRH 269
           EQS+      + G P  +SS+++ H
Sbjct: 237 EQSTHHQGQLVVGLPAPTSSIMMHH 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,027
Number of Sequences: 336
Number of extensions: 2968
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)