Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00012X
(577 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 32 0.005
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 1.6
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 2.9
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 2.9
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 23 2.9
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 2.9
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 3.8
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 22 3.8
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 22 3.8
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 22 3.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 5.0
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 6.6
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 8.7
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 8.7
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 8.7
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 31.9 bits (69), Expect = 0.005
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 131 VGPSGIP-GEPGQKGDRGLPGLQGLQGEKGDRGSLGEKGDQGLL 259
+G G+ G G + +G+ G+QG+QG +G +G G +G GLL
Sbjct: 835 LGVQGVQQGVQGVQTAQGVQGVQGVQGVQGVQGVQGVQGVPGLL 878
Score = 31.1 bits (67), Expect = 0.008
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 110 LKVTKXEVGPSGIPGEPGQKGDRGLPGLQGLQGEKGDRGSLG-EKGDQGLLGE 265
L V + G G+ G +G +G+ G+QG+QG +G +G G +G Q + G+
Sbjct: 835 LGVQGVQQGVQGVQTAQGVQGVQGVQGVQGVQGVQGVQGVPGLLQGVQQVFGQ 887
Score = 29.1 bits (62), Expect = 0.033
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 143 GIPGEPGQKGDRGLPGLQGLQGEKGDRGSLGEKGDQGLLG 262
G+ G G +G +G+ G+QG+QG G + + QG+ G
Sbjct: 852 GVQGVQGVQGVQGVQGVQGVQGVPGLLQGVQQVFGQGVQG 891
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 422 FRDNWVGLVYLGSQVKKD 475
+ DNW ++YLG+ V D
Sbjct: 312 YMDNWKMMMYLGTPVMPD 329
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 2.9
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 110 LKVTKXEVGPSGIPGEPG 163
+K + GP G+PG+ G
Sbjct: 325 MKTARENPGPPGVPGDHG 342
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 328 GEKGLPGTHGKH 363
G G+PG HG H
Sbjct: 333 GPPGVPGDHGDH 344
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 2.9
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 110 LKVTKXEVGPSGIPGEPG 163
+K + GP G+PG+ G
Sbjct: 325 MKTARENPGPPGVPGDHG 342
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 328 GEKGLPGTHGKH 363
G G+PG HG H
Sbjct: 333 GPPGVPGDHGDH 344
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 331 EKGLPGTHGKHGRPGL 378
+ GL G HG HG GL
Sbjct: 131 QTGLHGLHGLHGLHGL 146
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.6 bits (46), Expect = 2.9
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 110 LKVTKXEVGPSGIPGEPG 163
+K + GP G+PG+ G
Sbjct: 264 MKTARENPGPPGVPGDHG 281
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 328 GEKGLPGTHGKH 363
G G+PG HG H
Sbjct: 272 GPPGVPGDHGDH 283
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 87 SRVSFMTSIPYWSYWTFCPRLTTIA 13
+ V+ T PY SY+++ LT +A
Sbjct: 627 TNVTLSTKCPYPSYYSYIGVLTLVA 651
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 236 EKGDQGLLGEWEKKVTL 286
+K D+ LLGEWEK+ +
Sbjct: 169 DKKDE-LLGEWEKRAPM 184
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 236 EKGDQGLLGEWEKKVTL 286
+K D+ LLGEWEK+ +
Sbjct: 169 DKKDE-LLGEWEKRAPM 184
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 236 EKGDQGLLGEWEKKVTL 286
+K D+ LLGEWEK+ +
Sbjct: 169 DKKDE-LLGEWEKRAPM 184
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 5.0
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 110 LKVTKXEVGPSGIPGEPGQKGDRGLPGLQGL 202
LK K P GIPG G K + G+ L
Sbjct: 1126 LKPQKPFTSPGGIPGPNGIKMPSFMEGMPHL 1156
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1
Query: 346 GTHGKHGRPGLPG 384
G H HG PG+ G
Sbjct: 330 GVHNLHGMPGILG 342
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 8.7
Identities = 5/12 (41%), Positives = 6/12 (50%)
Frame = +2
Query: 518 SCRSNWTTWNSW 553
S +W WN W
Sbjct: 691 SVNKSWNKWNDW 702
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 8.7
Identities = 5/12 (41%), Positives = 6/12 (50%)
Frame = +2
Query: 518 SCRSNWTTWNSW 553
S +W WN W
Sbjct: 691 SVNKSWNKWNDW 702
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 8.7
Identities = 5/12 (41%), Positives = 6/12 (50%)
Frame = +2
Query: 518 SCRSNWTTWNSW 553
S +W WN W
Sbjct: 691 SVNKSWNKWNDW 702
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.313 0.144 0.460
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,081
Number of Sequences: 438
Number of extensions: 2791
Number of successful extensions: 27
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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