Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00011
         (439 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid pr...    27   8.4  
AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p pro...    27   8.4  
AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA...    27   8.4  

>J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid
           protein protein.
          Length = 846

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 240 TTEI*GRQHCVTVDCCCHGSPH 305
           TT+  GR HCV   C CH  P+
Sbjct: 568 TTDCSGRGHCVCGACECHKRPN 589


>AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p
           protein.
          Length = 846

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 240 TTEI*GRQHCVTVDCCCHGSPH 305
           TT+  GR HCV   C CH  P+
Sbjct: 568 TTDCSGRGHCVCGACECHKRPN 589


>AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA
           protein.
          Length = 846

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 240 TTEI*GRQHCVTVDCCCHGSPH 305
           TT+  GR HCV   C CH  P+
Sbjct: 568 TTDCSGRGHCVCGACECHKRPN 589


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,714,238
Number of Sequences: 53049
Number of extensions: 360560
Number of successful extensions: 618
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)