Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00010
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 188 3e-48
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 188 3e-48
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 188 3e-48
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 188 3e-48
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 188 3e-48
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 188 3e-48
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 188 3e-48
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 188 3e-48
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 188 3e-48
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 188 3e-48
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 185 3e-47
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 121 6e-28
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 111 5e-25
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 111 5e-25
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 110 1e-24
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 110 1e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 96 3e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 96 3e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 70 2e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.010
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 38 0.010
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.010
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 36 0.032
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 36 0.032
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 35 0.073
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 32 0.51
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 31 0.90
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 29 2.7
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 29 4.8
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 29 4.8
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 29 4.8
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z68119-6|CAE17916.1| 181|Caenorhabditis elegans Hypothetical pr... 28 6.3
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 28 6.3
U21319-6|AAC46676.3| 535|Caenorhabditis elegans Puf (pumilio/fb... 28 6.3
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 6.3
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 6.3
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 6.3
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 6.3
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 28 6.3
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 8.4
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 8.4
AF016418-7|AAK18898.1| 248|Caenorhabditis elegans Hypothetical ... 28 8.4
AF016418-6|AAK18899.1| 248|Caenorhabditis elegans Hypothetical ... 28 8.4
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 85/88 (96%), Positives = 86/88 (97%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APLNPKANREKMTQIMFETFNTPAMYVA 507
APLNPKANREKMTQIMFETFNTPAMYVA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVA 136
Score = 139 bits (336), Expect = 2e-33
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 689
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 690 GYSFTTT 710
GYSFTTT
Sbjct: 198 GYSFTTT 204
Score = 111 bits (267), Expect = 5e-25
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 710 AEREIVRDIKEKLCYVAL 763
AEREIVRDIKEKLCYVAL
Sbjct: 205 AEREIVRDIKEKLCYVAL 222
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 85/88 (96%), Positives = 86/88 (97%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APLNPKANREKMTQIMFETFNTPAMYVA 507
APLNPKANREKMTQIMFETFNTPAMYVA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVA 136
Score = 139 bits (337), Expect = 2e-33
Identities = 66/67 (98%), Positives = 67/67 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 689
QAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 690 GYSFTTT 710
GYSFTTT
Sbjct: 198 GYSFTTT 204
Score = 110 bits (264), Expect = 1e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 710 AEREIVRDIKEKLCYVAL 763
AEREIVRDIKEKLCYVAL
Sbjct: 205 AEREIVRDIKEKLCYVAL 222
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 85/88 (96%), Positives = 86/88 (97%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APLNPKANREKMTQIMFETFNTPAMYVA 507
APLNPKANREKMTQIMFETFNTPAMYVA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVA 136
Score = 139 bits (336), Expect = 2e-33
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 689
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 690 GYSFTTT 710
GYSFTTT
Sbjct: 198 GYSFTTT 204
Score = 111 bits (267), Expect = 5e-25
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 710 AEREIVRDIKEKLCYVAL 763
AEREIVRDIKEKLCYVAL
Sbjct: 205 AEREIVRDIKEKLCYVAL 222
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 85/88 (96%), Positives = 86/88 (97%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APLNPKANREKMTQIMFETFNTPAMYVA 507
APLNPKANREKMTQIMFETFNTPAMYVA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVA 136
Score = 139 bits (336), Expect = 2e-33
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 689
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 690 GYSFTTT 710
GYSFTTT
Sbjct: 198 GYSFTTT 204
Score = 111 bits (267), Expect = 5e-25
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 710 AEREIVRDIKEKLCYVAL 763
AEREIVRDIKEKLCYVAL
Sbjct: 205 AEREIVRDIKEKLCYVAL 222
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 188 bits (459), Expect = 3e-48
Identities = 85/88 (96%), Positives = 86/88 (97%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APLNPKANREKMTQIMFETFNTPAMYVA 507
APLNPKANREKMTQIMFETFNTPAMYVA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVA 136
Score = 139 bits (336), Expect = 2e-33
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 689
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 690 GYSFTTT 710
GYSFTTT
Sbjct: 198 GYSFTTT 204
Score = 111 bits (267), Expect = 5e-25
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 710 AEREIVRDIKEKLCYVAL 763
AEREIVRDIKEKLCYVAL
Sbjct: 205 AEREIVRDIKEKLCYVAL 222
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 85/88 (96%), Positives = 86/88 (97%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APLNPKANREKMTQIMFETFNTPAMYVA 507
APLNPKANREKMTQIMFETFNTPAMYVA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVA 136
Score = 139 bits (337), Expect = 2e-33
Identities = 66/67 (98%), Positives = 67/67 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 689
QAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 690 GYSFTTT 710
GYSFTTT
Sbjct: 198 GYSFTTT 204
Score = 108 bits (260), Expect = 4e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 710 AEREIVRDIKEKLCYVAL 763
AEREIVRDIKEKLCYVAL
Sbjct: 205 AEREIVRDIKEKLCYVAL 222
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 85/88 (96%), Positives = 86/88 (97%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APLNPKANREKMTQIMFETFNTPAMYVA 507
APLNPKANREKMTQIMFETFNTPAMYVA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVA 136
Score = 139 bits (336), Expect = 2e-33
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 689
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 690 GYSFTTT 710
GYSFTTT
Sbjct: 198 GYSFTTT 204
Score = 111 bits (267), Expect = 5e-25
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 710 AEREIVRDIKEKLCYVAL 763
AEREIVRDIKEKLCYVAL
Sbjct: 205 AEREIVRDIKEKLCYVAL 222
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 188 bits (459), Expect = 3e-48
Identities = 85/88 (96%), Positives = 86/88 (97%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 424 APLNPKANREKMTQIMFETFNTPAMYVA 507
APLNPKANREKMTQIMFETFNTPAMYVA
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAMYVA 92
Score = 139 bits (336), Expect = 2e-33
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 689
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 94 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 153
Query: 690 GYSFTTT 710
GYSFTTT
Sbjct: 154 GYSFTTT 160
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 710 AEREIVRDIKEKLCYVAL 763
AEREIVRDIKEKLCYVAL
Sbjct: 161 AEREIVRDIKEKLCYVAL 178
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 188 bits (459), Expect = 3e-48
Identities = 85/88 (96%), Positives = 86/88 (97%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 424 APLNPKANREKMTQIMFETFNTPAMYVA 507
APLNPKANREKMTQIMFETFNTPAMYVA
Sbjct: 95 APLNPKANREKMTQIMFETFNTPAMYVA 122
Score = 139 bits (336), Expect = 2e-33
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 689
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 124 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 183
Query: 690 GYSFTTT 710
GYSFTTT
Sbjct: 184 GYSFTTT 190
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = +2
Query: 155 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 37
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 710 AEREIVRDIKEKLCYVAL 763
AEREIVRDIKEKLCYVAL
Sbjct: 191 AEREIVRDIKEKLCYVAL 208
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 85/88 (96%), Positives = 86/88 (97%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APLNPKANREKMTQIMFETFNTPAMYVA 507
APLNPKANREKMTQIMFETFNTPAMYVA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVA 136
Score = 139 bits (336), Expect = 2e-33
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 689
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 690 GYSFTTT 710
GYSFTTT
Sbjct: 198 GYSFTTT 204
Score = 111 bits (267), Expect = 5e-25
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 710 AEREIVRDIKEKLCYVAL 763
AEREIVRDIKEKLCYVAL
Sbjct: 205 AEREIVRDIKEKLCYVAL 222
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 185 bits (451), Expect = 3e-47
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 424 APLNPKANREKMTQIMFETFNTPAMYV 504
APLNPK+NREKMTQIMFETFNTPAMYV
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPAMYV 134
Score = 134 bits (323), Expect = 9e-32
Identities = 62/67 (92%), Positives = 66/67 (98%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 689
QAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTER
Sbjct: 137 QAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTER 196
Query: 690 GYSFTTT 710
GY+FTTT
Sbjct: 197 GYTFTTT 203
Score = 105 bits (251), Expect = 5e-23
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 107 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 710 AEREIVRDIKEKLCYVA 760
AEREIVRDIKEKLCYVA
Sbjct: 204 AEREIVRDIKEKLCYVA 220
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 121 bits (291), Expect = 6e-28
Identities = 50/89 (56%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
Frame = +1
Query: 244 GTEGS-YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLL 417
G +G ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLL
Sbjct: 50 GLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLL 109
Query: 418 TEAPLNPKANREKMTQIMFETFNTPAMYV 504
T+APLNP NRE+ +I FETFN PA+Y+
Sbjct: 110 TDAPLNPLKNRERSAEIFFETFNVPALYI 138
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/64 (68%), Positives = 54/64 (84%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 689
QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L
Sbjct: 141 QAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRRE 200
Query: 690 GYSF 701
GY F
Sbjct: 201 GYEF 204
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 241
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 701 HYNAEREIVRDIKEKLCYVAL 763
H + E EIVR++KE CY+AL
Sbjct: 205 HRSNEFEIVREMKENACYLAL 225
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 111 bits (267), Expect = 5e-25
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 357
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 111 bits (267), Expect = 5e-25
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 357
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 110 bits (264), Expect = 1e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 357
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 110 bits (264), Expect = 1e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +1
Query: 244 GTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 348
G + SYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 95.9 bits (228), Expect = 3e-20
Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = +1
Query: 229 RDGRYGTEGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 405
R G + VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 406 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVATK 513
+LLTE PLNP +NREKM Q+MFE + ++YVA +
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQ 141
Score = 95.9 bits (228), Expect = 3e-20
Identities = 41/64 (64%), Positives = 53/64 (82%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 689
QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +R
Sbjct: 141 QAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQR 200
Query: 690 GYSF 701
GY+F
Sbjct: 201 GYNF 204
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 217
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 701 HYNAEREIVRDIKEKLCYVA 760
+++A+ E VR +KEKLCY+A
Sbjct: 205 NHSADFETVRQMKEKLCYIA 224
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 95.9 bits (228), Expect = 3e-20
Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +1
Query: 259 YVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 435
++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLN 125
Query: 436 PKANREKMTQIMFETFNTPAMYVATK 513
NRE +IMFE+FN P +Y+A +
Sbjct: 126 TPENREYTAEIMFESFNVPGLYIAVQ 151
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 8/85 (9%)
Frame = +3
Query: 510 QAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 665
QAVL+L AS + TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T +
Sbjct: 151 QAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYF 210
Query: 666 LMKILTERGYSFTTTPSGKSFVTSR 740
+ +L +R + T P+ +S+ ++
Sbjct: 211 IQSLLRDREH---TIPAEQSYEVAK 232
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 208
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/72 (41%), Positives = 45/72 (62%)
Frame = +1
Query: 313 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 492
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 493 AMYVATKPCSRC 528
A Y++ C
Sbjct: 154 AYYLSKNVVLSC 165
Score = 54.4 bits (125), Expect = 8e-08
Identities = 22/58 (37%), Positives = 41/58 (70%)
Frame = +3
Query: 516 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 689
VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 162 VLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 208
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 268 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 447
+E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 448 REKMTQIMFETF 483
+ ++I+F+ F
Sbjct: 107 PDVSSEILFDYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 683
Q L LYA TTG+V+D G+ V + VP+ +GY + AI + + + D L L+
Sbjct: 310 QPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLS 366
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 268 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 447
+E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 448 REKMTQIMFETF 483
+ ++I+F+ F
Sbjct: 107 PDVSSEILFDYF 118
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 35.9 bits (79), Expect = 0.032
Identities = 22/72 (30%), Positives = 29/72 (40%)
Frame = +1
Query: 394 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVATKPCSRCTRPVVPPVSCWTPAT 573
P P + +P P T + T +T A P S T P VPPV+ TP T
Sbjct: 629 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 688
Query: 574 VSPTPCPSTKDT 609
+ T +T T
Sbjct: 689 TTSTTTTTTTTT 700
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = +1
Query: 403 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVATKPCSRCTRPVVPPVSCWTPATVSP 582
+P T AP P T T T T+ T P P V+ TP+T++P
Sbjct: 668 NPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQ-----TTPTTPVVT--TPSTITP 720
Query: 583 TPCPSTKDTHSP 618
T P T+ P
Sbjct: 721 TTRPVTQPASQP 732
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 35.9 bits (79), Expect = 0.032
Identities = 22/72 (30%), Positives = 29/72 (40%)
Frame = +1
Query: 394 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVATKPCSRCTRPVVPPVSCWTPAT 573
P P + +P P T + T +T A P S T P VPPV+ TP T
Sbjct: 685 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 744
Query: 574 VSPTPCPSTKDT 609
+ T +T T
Sbjct: 745 TTSTTTTTTTTT 756
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = +1
Query: 403 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVATKPCSRCTRPVVPPVSCWTPATVSP 582
+P T AP P T T T T+ T P P V+ TP+T++P
Sbjct: 724 NPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQ-----TTPTTPVVT--TPSTITP 776
Query: 583 TPCPSTKDTHSP 618
T P T+ P
Sbjct: 777 TTRPVTQPASQP 788
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 34.7 bits (76), Expect = 0.073
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 478 TFNTPAMYVATKPCSRCTRPVVPPVSCWT--PATVSPTPCPSTKDTHSPTPSC 630
T +P+ V P P VPP T P TVS P PS PT SC
Sbjct: 351 TIPSPSKVVPNPPQKSLITPTVPPSMIQTVNPPTVSALPSPSVSPAPVPTTSC 403
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +1
Query: 478 TFNTPAMYVATKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDT 609
T +T A P S T P VPPV+ TP T + T +T T
Sbjct: 536 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 579
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = +1
Query: 403 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVATKPCSRCTRPVVPPVSCWTPATVSP 582
+P T AP P T T T T+ T P P V+ TP+T++P
Sbjct: 547 NPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQ-----TTPTTPVVT--TPSTITP 599
Query: 583 TPCPSTKDTHSP 618
T P T+ P
Sbjct: 600 TTRPVTQPASQP 611
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/80 (27%), Positives = 28/80 (35%), Gaps = 4/80 (5%)
Frame = +1
Query: 418 TEAPLNPKANREKMTQIMFETFNTPAMYV----ATKPCSRCTRPVVPPVSCWTPATVSPT 585
T P E T ET TP T P + T P + T T +PT
Sbjct: 96 TTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPT 155
Query: 586 PCPSTKDTHSPTPSCVWT*P 645
+T T + TP+ T P
Sbjct: 156 TTTTTPTTTTTTPTTTTTTP 175
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +1
Query: 487 TPAMYVATKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 639
T + T P + T P + TP T + TP +T+ T +PT T
Sbjct: 69 TTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTT 119
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/74 (27%), Positives = 27/74 (36%)
Frame = +1
Query: 406 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVATKPCSRCTRPVVPPVSCWTPATVSPT 585
P T AP T T P T P + T P + TP T + T
Sbjct: 189 PTTTTTAPTTTTTTPTTTTTTPTTTTTVPTT-TTTTPTTTTTTTTTPTTTTTTPTTTT-T 246
Query: 586 PCPSTKDTHSPTPS 627
P +T +T + TP+
Sbjct: 247 PATTTSETTTTTPT 260
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +1
Query: 478 TFNTPAMYVATKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 621
T T TKP + T P P + TP T + T +TK T + T
Sbjct: 257 TTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTT-TTAKTTKSTTTTT 303
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/78 (25%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Frame = +1
Query: 418 TEAPLNPKANREKMTQIMFETFNTPAMYVATKPCSRCTRPVVPPVSCWTPATVS--PTPC 591
T P T ET TP + T P + TP T + PT
Sbjct: 119 TPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTT 178
Query: 592 PSTKDTHSPTPSCVWT*P 645
+T T + TP+ T P
Sbjct: 179 TTTPTTTTTTPTTTTTAP 196
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Frame = +1
Query: 418 TEAPLNPKANREKMTQIMFETFNTPAMYVATKPCSRCTRPVV----PPVSCWTPATVS-- 579
TE P + T T TP T P + T P P + TP T +
Sbjct: 137 TETTTTPTTTTTETTTTPTTTTTTPTT-TTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTA 195
Query: 580 PTPCPSTKDTHSPTPSCVWT*P 645
PT +T T + TP+ T P
Sbjct: 196 PTTTTTTPTTTTTTPTTTTTVP 217
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 490 PAMYVATKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 630
P A PC+ C +P P +C T V TP P T T P+C
Sbjct: 182 PCPQQAACPCTTCNQPPPPCNTCNTQPVVIVTPAPCT--TCYQPPAC 226
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/67 (32%), Positives = 28/67 (41%)
Frame = +1
Query: 439 KANREKMTQIMFETFNTPAMYVATKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 618
K+ +E T I F T TP T + +VP S T T + TP P T T P
Sbjct: 428 KSTKEPKTTI-FTT--TPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTSTTTEP 484
Query: 619 TPSCVWT 639
T + T
Sbjct: 485 TTTTYTT 491
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = -1
Query: 362 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSPT*EPSVPYRPSRPDG 219
CQ+FS QLVT+ SMG +++++ L L AS + +P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 205 RGKAPPSGRDGRYGTEGSYVGDEAQSKRG 291
RGKA +GRDGR G EG+ Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +2
Query: 560 GLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYNAEREIVRD 733
G+ RR R R+PPR + SR+R R P R R R RD
Sbjct: 394 GMNRRSWSRSRSRSRSRSPPRRRSRSRSRTRDRRRPRRSNSRRRSRSRDRQRRSRSRD 451
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +3
Query: 501 RRHQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 680
R Q V SL + T V + D H V + EG + L + +DL ++
Sbjct: 84 REQQLVQSLRGTPTTLARVHELFDDEKHAVVVVEGSRREWYVPILSIVDKDLLRLNALVM 143
Query: 681 TERGYSFTTTPS 716
+ G F T PS
Sbjct: 144 VKAGGMFKTVPS 155
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/75 (26%), Positives = 29/75 (38%)
Frame = +1
Query: 394 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVATKPCSRCTRPVVPPVSCWTPAT 573
P E P ++ P +P + + Q+ T P A S T P+ P + P T
Sbjct: 1499 PAEIPRVVV--PQSPGTPQPVVPQVSIVTPQAPQPTAAATSAS--TGPIAPEPTTAAPTT 1554
Query: 574 VSPTPCPSTKDTHSP 618
TP P + H P
Sbjct: 1555 TETTPLPPSLAPHPP 1569
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +1
Query: 478 TFNTPAMYVATKPCSRCTRPVVPPVSCWTPATVS--PTPCPSTKDTHSPTPSCVWT*P 645
TFN KP + T P + TP T + PT +T T + TP+ T P
Sbjct: 73 TFNAVCDPSKPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTP 130
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 535 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 624
P++PP PA V T P+T++T P P
Sbjct: 97 PILPPTE--KPAPVITTETPTTRETEKPVP 124
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Frame = +1
Query: 382 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVATKPCSRCTRPVVPPVSCW 561
L V P ++ TE EK T I T ++ T T P +
Sbjct: 129 LVVPPNSTIIIDTETTTTFTTTTEKPTTIPSTTTSSTTTTTTTTTTEEPTTTTSPIATTT 188
Query: 562 TPATVSPTPCPSTKD--THSPTPS 627
T + + T P+T + TH PT S
Sbjct: 189 TSTSTTTTETPTTSEATTHEPTAS 212
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 6/76 (7%)
Frame = +1
Query: 418 TEAPLNPKANREKMTQIMFETFNTPAMYVATKPCSRCTRPVV------PPVSCWTPATVS 579
TE P + + + T ET +T +T P T PP S TP +
Sbjct: 178 TEPPSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTT 237
Query: 580 PTPCPSTKDTHSPTPS 627
T P T T SP+ S
Sbjct: 238 TTTAPETTSTESPSSS 253
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 529 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 627
T PP S TP + T P T T SP+ S
Sbjct: 497 TTSTEPPSSSTTPVQTTTTTAPETTSTESPSSS 529
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Frame = +1
Query: 400 EHPVLL--TEAPLNPKANREKMTQIMFE-TFNTPAMY-------VATKPCSRCTRPVVPP 549
+HP+LL T+ P+ N + + F+ T+++ M V C + +RP +
Sbjct: 724 QHPMLLFSTQQPMTCTPNSQNSCPLGFQCTYSSIRMLYFCCRDIVRIDKCLQGSRPEIWQ 783
Query: 550 VSCWTPATVSPTPCPSTKDTHSPTP 624
+ A CPST ++PTP
Sbjct: 784 STAEPRACSRDAQCPSTTSCYAPTP 808
>Z68119-6|CAE17916.1| 181|Caenorhabditis elegans Hypothetical
protein T18D3.9 protein.
Length = 181
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 334 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVATK 513
+WD +++ W + + L+V P V L PLN R + Q++ +N Y+ K
Sbjct: 116 SWDLLKEDWFNIYATSLKVWPFVQVVNLCFVPLN---YRVILNQVVAFFWNCYLSYITQK 172
Query: 514 P 516
P
Sbjct: 173 P 173
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/87 (25%), Positives = 37/87 (42%)
Frame = +3
Query: 477 NIQHARHVRRHQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 656
NIQ +H ++ L+A+ ++ +G+ + G A A L+ A D
Sbjct: 1541 NIQQ-KHQKQQAFEAELHANSDRIAAIIQAGNNLIENAKCGGGEAAVSARLK---ALNDQ 1596
Query: 657 TDYLMKILTERGYSFTTTPSGKSFVTS 737
D L+K TE+ Y KSF+ +
Sbjct: 1597 WDLLVKTTTEKSYRLKEANKQKSFMAA 1623
>U21319-6|AAC46676.3| 535|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 8 protein.
Length = 535
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 584 HRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYNAEREIVRDIK 739
H+AH + IR P + A+G+ S P+R P LL Y A +++++K
Sbjct: 144 HQAHSQSIRVPVQPSATGIF-SNPYREPTTTDD---LLTRYRANPAMMKNLK 191
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 384 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 509
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 384 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 509
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 384 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 509
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 384 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 509
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 514 PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 618
P + P +PP + T T + PCP T++P
Sbjct: 127 PVDQKPPPCIPPTTTTTTTTTTRPPCPYPPATNTP 161
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +1
Query: 487 TPAMYVATKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 639
TP++ T P T P P S PAT P + + T PTP WT
Sbjct: 206 TPSIVTVTPPSPSVT-PGGRPGST-PPATFPPGSVSTVRYTPGPTPPAPWT 254
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 155 KAGFAGDDAPRAVFPSIVGRPRHQG 229
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF016418-7|AAK18898.1| 248|Caenorhabditis elegans Hypothetical
protein C49G7.3 protein.
Length = 248
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 493 AMYVATKPCSRCTRP---VVPPVSCWTPATVSPTPCPSTKDTHS 615
A+Y A+ P + P V P +C+T AT PTP P D S
Sbjct: 54 ALYPASDPATGYPAPGNDVERPFACYTTAT--PTPAPVVPDMRS 95
>AF016418-6|AAK18899.1| 248|Caenorhabditis elegans Hypothetical
protein C49G7.4 protein.
Length = 248
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 493 AMYVATKPCSRCTRP---VVPPVSCWTPATVSPTPCPSTKDTHS 615
A+Y A+ P + P V P +C+T AT PTP P D S
Sbjct: 54 ALYPASDPATGYPAPGNDVERPFACYTTAT--PTPAPVVPDMRS 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,771,755
Number of Sequences: 27780
Number of extensions: 453587
Number of successful extensions: 2299
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2267
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -