Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00008
         (801 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   3.6  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   6.3  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    24   6.3  

>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 125 LSRYSPTQGGPRTGPRSRPASGPAGTPD 208
           LS   P++ G  TGP      G A TPD
Sbjct: 29  LSLVHPSKAGAATGPGGAIVVGRAETPD 56


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 98   SRSTRGCRRLSRYSPTQGGPRTGPRSRPASG 190
            SRS     R SR S ++   R+G RSR  SG
Sbjct: 1150 SRSGSQASRGSRRSRSRSRSRSGSRSRSRSG 1180



 Score = 23.4 bits (48), Expect = 8.3
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +2

Query: 98   SRSTRGCRRLSRYSPTQGGPRTGPRSRPASGPAGTPDS 211
            S S +G R  SR     GG R+  RSR  S  AG+  S
Sbjct: 1109 SGSAKGSRSRSRSG--SGGSRSRSRSRSRSQSAGSRKS 1144


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 186 QALPVLPILNEEQLKINPRAY*N 254
           +ALP+L  + EE  +++PR Y N
Sbjct: 116 EALPILNGMGEELERMHPRLYSN 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 808,787
Number of Sequences: 2352
Number of extensions: 16355
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)