Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00008
         (801 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-147|AAF51462.1|  119|Drosophila melanogaster CG13947-PA...    30   4.2  

>AE014134-147|AAF51462.1|  119|Drosophila melanogaster CG13947-PA
           protein.
          Length = 119

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 146 QGGPRTGPRSRPASGPAGTP 205
           QGGP+ GP+  P  GP G P
Sbjct: 19  QGGPQGGPQGGPQGGPQGGP 38



 Score = 29.9 bits (64), Expect = 4.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 146 QGGPRTGPRSRPASGPAGTP 205
           QGGP+ GP+  P  GP G P
Sbjct: 23  QGGPQGGPQGGPQGGPQGGP 42



 Score = 29.9 bits (64), Expect = 4.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 146 QGGPRTGPRSRPASGPAGTP 205
           QGGP+ GP+  P  GP G P
Sbjct: 27  QGGPQGGPQGGPQGGPQGGP 46



 Score = 29.9 bits (64), Expect = 4.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 146 QGGPRTGPRSRPASGPAGTP 205
           QGGP+ GP+  P  GP G P
Sbjct: 31  QGGPQGGPQGGPQGGPQGGP 50



 Score = 29.9 bits (64), Expect = 4.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 146 QGGPRTGPRSRPASGPAGTP 205
           QGGP+ GP+  P  GP G P
Sbjct: 35  QGGPQGGPQGGPQGGPQGGP 54



 Score = 29.9 bits (64), Expect = 4.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 146 QGGPRTGPRSRPASGPAGTP 205
           QGGP+ GP+  P  GP G P
Sbjct: 39  QGGPQGGPQGGPQGGPQGGP 58



 Score = 29.9 bits (64), Expect = 4.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 146 QGGPRTGPRSRPASGPAGTP 205
           QGGP+ GP+  P  GP G P
Sbjct: 43  QGGPQGGPQGGPQGGPQGGP 62



 Score = 29.9 bits (64), Expect = 4.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 146 QGGPRTGPRSRPASGPAGTP 205
           QGGP+ GP+  P  GP G P
Sbjct: 47  QGGPQGGPQGGPQGGPQGGP 66



 Score = 29.9 bits (64), Expect = 4.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 146 QGGPRTGPRSRPASGPAGTP 205
           QGGP+ GP+  P  GP G P
Sbjct: 51  QGGPQGGPQGGPQGGPQGGP 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,546,168
Number of Sequences: 53049
Number of extensions: 717081
Number of successful extensions: 1813
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)