Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00007
(402 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1148 - 24363952-24365086,24365178-24365361,24365438-243654... 32 0.20
07_01_0975 + 8223269-8224354 31 0.26
08_02_0066 - 11852258-11852461,11852542-11852957,11853778-11854333 31 0.34
09_04_0460 - 17779111-17780184 30 0.79
07_01_0348 - 2517072-2517323,2517963-2518160 29 1.0
03_01_0648 - 4749150-4749275,4749902-4749986,4750761-4750861,475... 29 1.8
02_01_0302 - 2021221-2023305 29 1.8
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 28 2.4
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 3.2
07_01_0521 + 3867922-3867967,3868282-3868544,3868680-3868744,386... 28 3.2
03_05_0850 + 28206166-28206767,28207648-28207891,28208076-282083... 28 3.2
02_05_1006 + 33448476-33448915,33449016-33449083,33449681-334497... 28 3.2
03_05_1071 + 30133696-30133874,30134294-30135200,30135224-301353... 27 4.2
12_01_0932 + 9253975-9254676,9254976-9255092,9255160-9255192 27 5.6
12_01_0183 - 1350451-1350477,1350887-1350969,1350977-1352696,135... 27 5.6
11_01_0183 - 1440460-1440467,1440832-1440957,1440965-1442858 27 5.6
09_02_0158 - 5102148-5103818 27 5.6
03_06_0428 + 33860982-33861321,33861410-33861999,33862520-33862582 27 5.6
02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,290... 27 5.6
08_02_0697 + 20144063-20144341,20144755-20145366 27 7.3
07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,203... 27 7.3
03_05_0967 + 29265465-29266214,29267718-29267944,29268428-292685... 27 7.3
02_05_0329 - 27986261-27987372,27988632-27988638,27988999-279891... 27 7.3
01_06_0258 + 27950196-27950749,27953670-27954570 27 7.3
01_01_0885 + 6966700-6966979,6967930-6968110,6968224-6968365,696... 27 7.3
07_03_1067 + 23728642-23728690,23728832-23729010 26 9.7
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 26 9.7
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311... 26 9.7
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 26 9.7
03_01_0240 - 1862699-1864186,1864245-1864442 26 9.7
02_01_0140 + 1014594-1016048 26 9.7
>07_03_1148 -
24363952-24365086,24365178-24365361,24365438-24365474,
24365585-24365818
Length = 529
Score = 31.9 bits (69), Expect = 0.20
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 203 GPEAGCERGLVRGPPCVGNNGTVADNPEYYGFII 304
G C + LV G C+ N T NP+YYG ++
Sbjct: 358 GTRVYCRQALVGGNYCLLNTTTFVPNPDYYGALL 391
>07_01_0975 + 8223269-8224354
Length = 361
Score = 31.5 bits (68), Expect = 0.26
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 288 YSGLSATVPLFPTQGGPRTSPRSHPASGPAGTP-GSR*GTAVGRPPSLG 145
Y G S + P+ P +SP P+S P+G+P GS G+ G P + G
Sbjct: 237 YGGSSGSPSSSPSSS-PSSSPSGSPSSSPSGSPSGSPAGSPAGGPTAGG 284
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1
Query: 285 SGLSATVPLFPTQGGPRTSPRSHPASGPAGTPGSR*GTAVGRPPS 151
S ++ P G P +SP P+ PAG+P G G P S
Sbjct: 245 SSSPSSSPSSSPSGSPSSSPSGSPSGSPAGSPAG--GPTAGGPAS 287
>08_02_0066 - 11852258-11852461,11852542-11852957,11853778-11854333
Length = 391
Score = 31.1 bits (67), Expect = 0.34
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 296 SRSTRGCR-RLSRCSPHKAVPVPVHVRIQLQALPVLPVLDEE 174
SR+T R R+SRCSP + VPV I+ P + V++ E
Sbjct: 4 SRATCSTRPRISRCSPSRRWFVPVAAAIESHPTPAIHVVERE 45
>09_04_0460 - 17779111-17780184
Length = 357
Score = 29.9 bits (64), Expect = 0.79
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +3
Query: 75 DSYGDRKTWGSNDSSEKRHTWYLYPVKVGDQQLFLIENREYRQGLKLDANVDWYGD 242
D +GD + H WY+ V + + + I EYR G V W GD
Sbjct: 107 DGFGDGDEEAGGGGGDVHHVWYIRTVGLDEATITSIATAEYRAG------VGWGGD 156
>07_01_0348 - 2517072-2517323,2517963-2518160
Length = 149
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 264 PLFPTQGGPRTSPRSHPASGPAGT 193
PL PT GG R SPR P PA +
Sbjct: 9 PLGPTSGGSRPSPRRPPCLPPAAS 32
>03_01_0648 -
4749150-4749275,4749902-4749986,4750761-4750861,
4750933-4751191,4751382-4751434,4752828-4752990,
4753181-4754616
Length = 740
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1
Query: 255 PTQGGPRTSPRSHPASGPAGTPGSR*GTAVGRPPS 151
P GG +SP S ++G A +PGS VGR PS
Sbjct: 99 PLSGGFASSPASSTSAGSAPSPGS--DRFVGRSPS 131
>02_01_0302 - 2021221-2023305
Length = 694
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 282 GLSATVPLFPTQGGPRTSPRSHPASGPAGTP 190
G S+T P +P+ G + S SHP+ + TP
Sbjct: 462 GSSSTTPSYPSPNGGKPSTPSHPSPPGSTTP 492
>07_03_0860 + 22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 176 PHREPGVPAGPEAGCERGL-VRGPPCVGN 259
P ++ + GP+ G RG+ +RG P + N
Sbjct: 1893 PRKDEAITLGPQGGLARGMSIRGQPLISN 1921
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 249 QGGPRTSPRSHPASGPAGTPGSR*GTAVGRPPSLGINTRCVSSHWNRS 106
QGG T+ R HPAS P P + G + RPP +G H+ R+
Sbjct: 452 QGGMDTNYRQHPASSPV-VP-NHIGPSPVRPP-MGFKMGSSEDHFERN 496
>07_01_0521 +
3867922-3867967,3868282-3868544,3868680-3868744,
3868828-3868990,3869798-3869946,3870041-3870289,
3870860-3871028,3871110-3871202,3871703-3871952,
3872127-3872217,3872673-3872769
Length = 544
Score = 27.9 bits (59), Expect = 3.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 330 VGGFHCHGWIMKP*YSGLSATVPLF 256
+ GF W++KP Y +S ++PLF
Sbjct: 107 ISGFSSLPWLIKPLYGFISDSIPLF 131
>03_05_0850 +
28206166-28206767,28207648-28207891,28208076-28208389,
28209013-28209067
Length = 404
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -1
Query: 255 PTQGGPRTSPRSHPASGPAGTPGSR*GTAVGRPPSLG 145
P+ PR SP S P S + TP + V RPP G
Sbjct: 14 PSSSSPRISPHSTPVSLTSATP-----SGVHRPPGCG 45
>02_05_1006 +
33448476-33448915,33449016-33449083,33449681-33449751,
33449905-33450156,33450473-33450636,33450731-33450773,
33451044-33451161,33451384-33451481,33451550-33451594
Length = 432
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 155 GGRPTAVPHREPGVPAGPEAGCERGLVRGPP 247
G RP + + P P GP RG+ R PP
Sbjct: 33 GRRPASAMGQAPSSPPGPGRSRSRGISRWPP 63
>03_05_1071 +
30133696-30133874,30134294-30135200,30135224-30135358,
30135545-30136553,30136699-30136703
Length = 744
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 285 SGLSATVPLFPTQGGPRTSPRSHPASGPAGTPGSR*GTAVG 163
+G +A V FP GG + + P G AG P + GT+ G
Sbjct: 273 AGGAAVVGAFPVAGGGVATDAAFPVLGGAGPPAA--GTSAG 311
>12_01_0932 + 9253975-9254676,9254976-9255092,9255160-9255192
Length = 283
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 174 TAVGRPPSLGINTRCVSSHWNRSIPRSSCH 85
T +PP + CV S W +I R+ CH
Sbjct: 43 TLARQPPHRSVLPWCVHSAWEVAIVRAHCH 72
>12_01_0183 -
1350451-1350477,1350887-1350969,1350977-1352696,
1354258-1354428,1355892-1355939
Length = 682
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 126 RHTWYLYPVKVGDQQLFLIENREYRQGLKLDANVDWYGDR 245
+HT +Y Q NR ++G+KL+ V W GDR
Sbjct: 474 KHTPMVYECSSNCQCSHNCRNRITQKGIKLNFEVFWTGDR 513
>11_01_0183 - 1440460-1440467,1440832-1440957,1440965-1442858
Length = 675
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 126 RHTWYLYPVKVGDQQLFLIENREYRQGLKLDANVDWYGDR 245
+HT +Y Q NR ++G+KL+ V W GDR
Sbjct: 459 KHTPMVYECSSNCQCSHNCRNRITQKGIKLNFEVFWTGDR 498
>09_02_0158 - 5102148-5103818
Length = 556
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 167 TAVPHREPGVPAGPEAGCERGLVRGPP 247
T P PG P AG ERG +R PP
Sbjct: 80 TTSPAHGPGQPPLDSAGGERGQLRRPP 106
>03_06_0428 + 33860982-33861321,33861410-33861999,33862520-33862582
Length = 330
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 240 PRTSPRSHPASGPAGTPGS 184
P TSP + P S PA TP S
Sbjct: 172 PSTSPSASPGSPPAATPSS 190
>02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,
2907650-2907790,2907870-2908043,2908577-2908851,
2909592-2909755,2910409-2910536,2910628-2910734,
2911747-2911880,2912266-2912441,2912530-2914257,
2915084-2915239,2915328-2915486,2915581-2915751,
2915931-2916047,2916417-2916473,2916565-2916680,
2916790-2916916,2917862-2917945
Length = 2056
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 66 VNVDSYGDRKTWGSNDSSEKRHTWYLYPVKVGDQQLFLIENREYRQGLKLDANVDWYGD 242
V+ + D+++WG+ +S W PV GD E E R N DW D
Sbjct: 1773 VDASTNKDKESWGNVPASPSDSAWNAAPVSQGDDVWNSAEANESR-------NKDWKSD 1824
>08_02_0697 + 20144063-20144341,20144755-20145366
Length = 296
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +2
Query: 146 PSEGGRPTAVPHREPGVPAGPEAGCERGLVRGPPCVGNNGTVAD 277
PS+ T R V G E GC R + G C G +A+
Sbjct: 219 PSQPKGLTVCRRRRQHVEVGKETGCRRNVDGGKICGSGLGRIAE 262
>07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,
2031334-2031415,2031544-2031609,2032606-2033304,
2033422-2035424,2035599-2036173,2037060-2037223,
2037306-2037365,2037475-2037839
Length = 1699
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = +2
Query: 125 ETHLVFIPSEGGRPTAVPHRE----PGVPAGPEAG 217
++ V +P+E G+P+ H+E P P+GP G
Sbjct: 1354 DSSTVSVPTEKGKPSKQSHQEKEILPAPPSGPSFG 1388
>03_05_0967 +
29265465-29266214,29267718-29267944,29268428-29268557,
29268651-29268719,29268803-29268946,29269775-29270011,
29270897-29270998,29271131-29271396,29271766-29273410,
29274449-29275018
Length = 1379
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 155 GGRPTAVPHREPGVPAGPEAGCERG 229
GG PTA P P GP AG RG
Sbjct: 263 GGAPTATGQFRPPGPPGPFAGRGRG 287
>02_05_0329 -
27986261-27987372,27988632-27988638,27988999-27989128,
27989157-27989216,27989318-27989970,27990056-27990526
Length = 810
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 253 GEQRDSRRQPRVLRLHNPAVAVKPSYIPDDCRYI*PC 363
G + D+ PR+L +H P ++ S CR + C
Sbjct: 598 GHRLDAMPSPRILAVHEPLSSLPASVKASGCRVVYLC 634
>01_06_0258 + 27950196-27950749,27953670-27954570
Length = 484
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 255 PTQGGPRTSPRSHPASGPAGTPGSR 181
P++G P P PAG PG+R
Sbjct: 289 PSEGTASCKPAPAPTPAPAGAPGAR 313
>01_01_0885 +
6966700-6966979,6967930-6968110,6968224-6968365,
6968448-6968517,6968617-6968783
Length = 279
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 15 VIFKILNTEHEMYLKLDVNVDSYGDRKTW 101
++F +L+T +Y K + +DSYG+ K W
Sbjct: 224 IVFVVLHTVPILYEKYEDQIDSYGE-KGW 251
>07_03_1067 + 23728642-23728690,23728832-23729010
Length = 75
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 288 YSGLSATVPLFPTQGGPRTSPRSHPASGPAGTPGSR*GTAVGRPPSLG 145
Y G V + P QG P P PAG P ++ G PP G
Sbjct: 3 YYGQQPPVGVPPQQGYPGKDGYPPPGYPPAGYPPAQGYPPAGYPPQQG 50
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/74 (27%), Positives = 30/74 (40%)
Frame = +2
Query: 161 RPTAVPHREPGVPAGPEAGCERGLVRGPPCVGNNGTVADNPEYYGFIIQPWQ*NPPTSQT 340
+P+A P P P R GNN + AD P G ++ P P++
Sbjct: 19 KPSAGPPLPPATLRLPSRRLARLTASCSSGSGNN-SAADFPNPNGILVAP-----PSAAA 72
Query: 341 TAATSDHVTINFIT 382
AA S H+ ++ T
Sbjct: 73 VAAASSHIDVDVAT 86
>05_03_0645 +
16529635-16529794,16530188-16530312,16531100-16531173,
16531961-16532006,16532638-16532730,16534429-16535886
Length = 651
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2
Query: 236 VPVHVRIQLQALPVLPVLDEE 174
V V++QLQ LPVLP+ DEE
Sbjct: 535 VQTEVQLQLQ-LPVLPLADEE 554
>04_01_0162 +
1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -1
Query: 294 P*YSGLSATVPLFPTQGGPRTSPRSHPASGPAGT--PGSR*GTAVGRPPSLG 145
P G A P P+QG T+P P+ GP GT P S+ PPS G
Sbjct: 106 PSSQGPFAAAPQPPSQGPFGTAP--PPSQGPFGTAPPPSQGPFGTAPPPSQG 155
>03_01_0240 - 1862699-1864186,1864245-1864442
Length = 561
Score = 26.2 bits (55), Expect = 9.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 339 VWDVGGFHCHGWIM 298
+W V FHC+GW M
Sbjct: 237 LWTVPMFHCNGWCM 250
>02_01_0140 + 1014594-1016048
Length = 484
Score = 26.2 bits (55), Expect = 9.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 339 VWDVGGFHCHGWIM 298
+W V FHC+GW M
Sbjct: 148 LWTVPMFHCNGWCM 161
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,942,130
Number of Sequences: 37544
Number of extensions: 251588
Number of successful extensions: 997
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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