Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00007
         (402 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    25   1.0  
AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding pr...    23   3.2  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   5.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    22   7.3  
U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiati...    22   9.6  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    22   9.6  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    22   9.6  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   9.6  

>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 175 NSCWSPTFTGYKYQVCLFSLESFD 104
           N CW    +G+K Q C  S++  D
Sbjct: 297 NLCWKCGLSGHKKQACTNSVKCLD 320


>AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP12 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 388 FYSDKIYCNMVRCSGSRLG 332
           F  D++ C + RC G RLG
Sbjct: 64  FPDDQLTCCVFRCLGMRLG 82


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -1

Query: 264 PLFPTQGGPRTSPRSHPASGPAGTPGSR*GTAVGRPPSLGI 142
           P +P   GP+  P      GPAG PG     A GRP   G+
Sbjct: 151 PGYPGDVGPKGEP---GPKGPAGHPG-----APGRPGVDGV 183



 Score = 21.8 bits (44), Expect = 9.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -1

Query: 255 PTQGGPRTSPRSHPASGPAGTPGSR*GTAVGRPPSLGI 142
           P   GP+        +GPAG PG     A G P  +G+
Sbjct: 721 PGFNGPKGDKGLPGLAGPAGIPG-----APGAPGEMGL 753


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 237 RTSPRSHPASGPAGTPGSR*GTAVGRPPSL 148
           R  PR+    GP    G R  +   RPPS+
Sbjct: 379 RAPPRNFTMPGPGPGIGEREKSNPSRPPSV 408


>U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiation
           factor protein.
          Length = 110

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 260 NGTVADNPEYYGFIIQ 307
           NGTV ++PE YG ++Q
Sbjct: 67  NGTVIEHPE-YGEVLQ 81


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +1

Query: 217  MRTWTGTGTALCGEQRDSRRQPRVLRLHNPAVAVK 321
            M +W  TG     + R    QP V  LH+ A   K
Sbjct: 1217 MSSWPYTGYKDIADLRPMAEQPSVHILHDRAQTTK 1251


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 256 EQRDSRRQPRVLRLHNP 306
           +QR  RR P + R H P
Sbjct: 225 QQRSPRRDPPINRQHTP 241


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 8   QQRHLQDTEHRTRDVLETGRERGQLR 85
           +  HLQ    +T  V+ +   RGQL+
Sbjct: 696 EDHHLQLAPEKTEGVMISSLRRGQLK 721


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,418
Number of Sequences: 2352
Number of extensions: 9195
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)