Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00006
(727 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 109 4e-25
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 61 1e-10
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 49 8e-07
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 41 2e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 40 5e-04
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 31 0.13
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.39
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.89
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 29 0.89
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 27 2.1
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 26 4.8
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 26 4.8
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 4.8
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 6.3
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 25 8.3
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 8.3
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 109 bits (262), Expect = 4e-25
Identities = 53/84 (63%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 ISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 433
+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G++S WRGN
Sbjct: 36 VSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNT 95
Query: 434 ANVIRYFPTQALNFAFKDKYKQVF 505
ANV+RYFPTQALNFAFKDK+K++F
Sbjct: 96 ANVLRYFPTQALNFAFKDKFKKMF 119
Score = 29.9 bits (64), Expect = 0.39
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +2
Query: 260 SAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 439
+ A S V ++ + L S + ++++ G+VD + + + GL +RG +
Sbjct: 142 AGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPS 201
Query: 440 VIRYFPTQALNFAFKDKYKQVFL 508
V+ + L F D K V L
Sbjct: 202 VVGIVVYRGLYFGMYDTLKPVVL 224
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 61.3 bits (142), Expect = 1e-10
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = +2
Query: 257 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 436
++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+RGN
Sbjct: 29 VAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNGT 81
Query: 437 NVIRYFPTQALNFAFKDKYKQ 499
N +R FP A+ FA + KQ
Sbjct: 82 NCLRAFPYGAVQFATFNMLKQ 102
Score = 31.9 bits (69), Expect = 0.096
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 269 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 448
+ +T P + ++ QV + YK I A I K +G+ F+RG +N+++
Sbjct: 239 IGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295
Query: 449 YFPTQALNF 475
P ++ +
Sbjct: 296 IIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 48.8 bits (111), Expect = 8e-07
Identities = 29/93 (31%), Positives = 50/93 (53%)
Frame = +2
Query: 230 VR*GLPGWRISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 409
V+ G+ G + V+K+ VAP++RVK+L Q H S + A R+ G+ A I GL
Sbjct: 18 VKSGIAGGT-AGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGL 75
Query: 410 LSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 508
++G+ A + R FP + F ++ ++V +
Sbjct: 76 HGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLI 108
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 41.1 bits (92), Expect = 2e-04
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +2
Query: 281 AVAPIERVKLL--LQVQHVSKQIAADQR-YKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 451
AVA I V L L V Q++ + Y G D +I K +G +RG ++
Sbjct: 16 AVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILME 75
Query: 452 FPTQALNFAFKDKYKQVFLAVLTRRRSSGVTSLV 553
P +AL FA D Y +++ V R+ SS S++
Sbjct: 76 APKRALKFASNDTYSKLWRKVFKRKDSSPALSIL 109
Score = 31.5 bits (68), Expect = 0.13
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 284 VAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 460
V P E +K+ LQ V++ SK Y G VD F +I K++ +L+ + G A + R+
Sbjct: 122 VVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNGFEATMWRHVVW 174
Query: 461 QALNFAFKDKYK 496
A F K +
Sbjct: 175 NAGYFGVIQKIR 186
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 39.5 bits (88), Expect = 5e-04
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = +2
Query: 257 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 436
+S + T V P+ ++ LQ Q S A Y G +D F + K +G ++G
Sbjct: 344 LSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGLSP 400
Query: 437 NVIRYFPTQALNFAFKDKYKQ 499
N+++ P+ A+++ + K+
Sbjct: 401 NLLKVAPSVAISYLVYENCKK 421
Score = 31.1 bits (67), Expect = 0.17
Identities = 18/91 (19%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 257 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSFWRGNF 433
++ +V++ + P++ +K +Q +S+ Q K I+ + + + K G+ ++RG
Sbjct: 237 MAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRGVL 292
Query: 434 ANVIRYFPTQALNFAFKDKYKQVFLAVLTRR 526
++ FP A + + K+ ++ +L R
Sbjct: 293 VGILGMFPYSATDLGTFEGLKRTWIGILASR 323
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 31.5 bits (68), Expect = 0.13
Identities = 18/82 (21%), Positives = 36/82 (43%)
Frame = +2
Query: 257 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 436
++ ++ PI+ VK +Q ++A + YK + +I + GLL FW G
Sbjct: 212 VAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFWSGATP 265
Query: 437 NVIRYFPTQALNFAFKDKYKQV 502
+ R + + F +K ++
Sbjct: 266 RLARLILSGGIVFTVYEKVMEI 287
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 29.9 bits (64), Expect = 0.39
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +2
Query: 332 SKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 475
S I +Y G++ F + EQG++ + G A+++R P + F
Sbjct: 303 SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILF 350
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 28.7 bits (61), Expect = 0.89
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 344 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 442
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
Score = 27.1 bits (57), Expect = 2.7
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +2
Query: 272 SKTAVAPIERVKLLLQVQHVSKQIAADQRYK---GIVDAFVRIPKEQGLLSFWRGNFANV 442
S VAP++ VK Q Q + G + + I +G+ +RG +
Sbjct: 19 SSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMM 78
Query: 443 IRYFPTQALNFAFKDKYKQVF 505
+ Y P+ ++ F +K K +F
Sbjct: 79 LGYLPSWSIYFVVYEKCKVLF 99
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 28.7 bits (61), Expect = 0.89
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +2
Query: 242 LPGWRISAAVSKTA----VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 409
+P + +S A+S A V P+E V++ LQ+Q K + Y G D +I + GL
Sbjct: 112 MPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQYGL 166
Query: 410 LSFWRG 427
+G
Sbjct: 167 SGIMKG 172
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 27.5 bits (58), Expect = 2.1
Identities = 18/82 (21%), Positives = 35/82 (42%)
Frame = +2
Query: 257 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 436
IS+ + + +AP + +K+ +Q+ S + F +++G+ + WRGN
Sbjct: 25 ISSVICRFMIAPFDVIKIRMQITQSSLR-----------PVFKETVQKEGVRALWRGNVV 73
Query: 437 NVIRYFPTQALNFAFKDKYKQV 502
+ Y A F K K +
Sbjct: 74 AELLYLVYGAAEFVAFSKLKHL 95
Score = 25.4 bits (53), Expect = 8.3
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +2
Query: 257 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 436
I+ A SK + P++ V LQ YK D F+ I + G+ +RG
Sbjct: 201 IAGAGSKAIMFPVDTVVKTLQT--------FPSNYKSFKDCFLSIYRNSGIKGLYRGLSV 252
Query: 437 NVIRYFP 457
++++ P
Sbjct: 253 SMLKVAP 259
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 26.2 bits (55), Expect = 4.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 712 QTVGLEDLLMQFPRPEIHAAISLPTSAARRVRAKSR 605
+T+G + LM+FP P++ I+ + A R K +
Sbjct: 181 ETIGFGNCLMEFPTPQMELRINNQVAHANYRRLKGK 216
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 652 ISLPTSAARRVRAKSRGTRSTERWLR 575
IS PTS VRAK+R R+ + LR
Sbjct: 85 ISNPTSKTNNVRAKARNIRNPSQRLR 110
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 4.8
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 80 YEITPNLLFKNQELVFRDPPSACAATPTSTY 172
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 384 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 277
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 475 RLQGQVQAGVPRGVDKKTQFWRYFXXXXXXXXXXXXTSLCF 597
RLQ Q A +P V + +FWR F TS+ F
Sbjct: 7 RLQPQRFAALPNPVTAENKFWRSFKVPVVAKEYSAITSIHF 47
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 368 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 460
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,837,653
Number of Sequences: 5004
Number of extensions: 56349
Number of successful extensions: 193
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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