Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00005
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 175 6e-45
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 164 1e-41
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 155 7e-39
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 136 3e-33
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 123 3e-29
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 101 9e-23
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 90 3e-19
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 73 5e-14
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 39 5e-04
SPBC685.09 |orc2|orp2|origin recognition complex subunit Orc2|Sc... 29 0.77
SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces... 27 3.1
SPAC13C5.06c |mug121||sequence orphan|Schizosaccharomyces pombe|... 26 4.1
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 26 5.4
SPAC5D6.05 |sep11|pmc6, med18|mediator complex subunit Pmc6 |Sch... 26 5.4
SPBC1604.05 |pgi1||glucose-6-phosphate isomerase |Schizosaccharo... 26 5.4
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 25 7.2
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 25 9.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 9.5
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 175 bits (425), Expect = 6e-45
Identities = 80/100 (80%), Positives = 84/100 (84%), Gaps = 1/100 (1%)
Frame = -3
Query: 552 ETAENFRALCTGEK-VGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKL 376
+TA NFRALCTGEK GY GS+FHR+IP FM QGGDFT NGTGGKSIYG F DENF L
Sbjct: 29 KTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFAL 88
Query: 375 KHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFG 256
KH PG+LSMANAGPNTNGSQFFITTV TPWLD KHVVFG
Sbjct: 89 KHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFG 128
Score = 36.7 bits (81), Expect = 0.003
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -2
Query: 253 VVEGMDVVQKMEKLGSKSGKPIKKVVISDSG 161
V EGMDVV+K+E LGS SG ++VI G
Sbjct: 130 VTEGMDVVKKVESLGSNSGATRARIVIDKCG 160
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 164 bits (398), Expect = 1e-41
Identities = 77/111 (69%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
Frame = -3
Query: 552 ETAENFRALCTGEK-VGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKL 376
+TAENFRAL TGEK GY+GS FHR+IP+FM QGGD T +GTGGKSIYG F DENFKL
Sbjct: 54 KTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKL 113
Query: 375 KHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGLWLKVWMLCRK 223
H PG+LSMANAGP++NGSQFFITTV TPWLD HVVFG L + + +K
Sbjct: 114 SHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKK 164
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 155 bits (375), Expect = 7e-39
Identities = 78/122 (63%), Positives = 89/122 (72%), Gaps = 5/122 (4%)
Frame = -3
Query: 552 ETAENFRALCTG-EKVG----YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDE 388
+T +NF +LC G EK G YKGS FHR+I +FM QGGDFT NGTGG+SIYG F DE
Sbjct: 30 KTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDE 89
Query: 387 NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGLWLKVWMLCRKWKNLV 208
NF+LKH P +LSMANAGPNTNGSQFFITTVPTP LD KHVVFG ++ R +NL
Sbjct: 90 NFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLE 149
Query: 207 LK 202
K
Sbjct: 150 TK 151
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 136 bits (328), Expect = 3e-33
Identities = 67/107 (62%), Positives = 78/107 (72%), Gaps = 8/107 (7%)
Frame = -3
Query: 552 ETAENFRALCTGEK-------VGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG-RTF 397
+TAENFR CTGE +GYK S+FHRII FM QGGDF + +GTG +I+ RTF
Sbjct: 32 KTAENFRQFCTGETLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTF 91
Query: 396 SDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFG 256
DENF LKH PG+LSMANAG ++NG QFFITTVP +LD KHVVFG
Sbjct: 92 PDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFG 138
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 123 bits (296), Expect = 3e-29
Identities = 64/112 (57%), Positives = 74/112 (66%), Gaps = 2/112 (1%)
Frame = -3
Query: 552 ETAENFRALCTGEKVGY-KGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDE-NFK 379
+T +NF L K GY G FHR+IPDF+ QGGD T G GG SIYG F DE +
Sbjct: 24 KTCQNFYTLA---KEGYYDGVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSD 79
Query: 378 LKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGLWLKVWMLCRK 223
L HTG GILSMANAGPNTN SQFFIT PTPWLD KH +FG + +C++
Sbjct: 80 LHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKR 131
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 101 bits (242), Expect = 9e-23
Identities = 50/83 (60%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Frame = -3
Query: 504 YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDE-NFKLKHTGPGILSMANAGPN 328
Y + FHRII +FM QGGD +GTGG+SI+ + F DE + LKH P +SMAN+GPN
Sbjct: 491 YDNTIFHRIIKNFMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPN 549
Query: 327 TNGSQFFITTVPTPWLDRKHVVF 259
TNGSQFFITT TPWLD KH +F
Sbjct: 550 TNGSQFFITTDLTPWLDGKHTIF 572
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 89.8 bits (213), Expect = 3e-19
Identities = 46/84 (54%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = -3
Query: 504 YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFK-LKHTGPGILSMANAGPN 328
Y+ + FHR I FM QGGD + G GG+SI+G+ F DE LKH GI+SMAN G N
Sbjct: 312 YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370
Query: 327 TNGSQFFITTVPTPWLDRKHVVFG 256
TNGSQFFI P LD KH +FG
Sbjct: 371 TNGSQFFILYGPAKHLDNKHTIFG 394
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 72.5 bits (170), Expect = 5e-14
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = -3
Query: 552 ETAENFRALCTGEKVGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENF-KL 376
+ NF LC + Y G+ HR++P+F+ QGGD T G GG+SIYG F+ E +L
Sbjct: 35 KACRNFIQLCL--EGYYDGTIVHRVVPEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRL 91
Query: 375 KHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFG 256
+ G++ MA N SQFFIT PTP + K +FG
Sbjct: 92 RFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFG 131
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 39.1 bits (87), Expect = 5e-04
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 15/114 (13%)
Frame = -3
Query: 552 ETAENFRALCTGEKVGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG------RTFSD 391
+T ENF LC + Y F+ I ++ CQ GD G GG+ ++ R F
Sbjct: 23 KTCENFLKLCKLKY--YNFCPFYNIQHNYTCQTGDPLGPTGDGGRCVWNVLNKGTRFFKA 80
Query: 390 E-NFKLKHTGPGILSMANAGPNTN-------GSQFFITTVPT-PWLDRKHVVFG 256
E N L H G++SM+ A ++ GSQF IT LD ++ ++G
Sbjct: 81 EFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEGLDERYPIYG 134
>SPBC685.09 |orc2|orp2|origin recognition complex subunit
Orc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 28.7 bits (61), Expect = 0.77
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 179 NF-LYWFTTFRTKFFHFLHNIHTFNHNPNTTCFLSNQGVGTVVIKN 313
NF L W T+ + F +H+ TF N T + ++ G+G + N
Sbjct: 377 NFALLWDTSLESSFNFVMHDATTFARYYNETTYENSLGIGRANVSN 422
>SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 369
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 241 MDVVQKMEKLGSKSGKPIKK 182
M+ +QKM+ L +K G+P KK
Sbjct: 1 MEPIQKMDSLNNKEGQPDKK 20
>SPAC13C5.06c |mug121||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 177
Score = 26.2 bits (55), Expect = 4.1
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Frame = -2
Query: 322 WVSIFYNHSSDSLVG*KTCSIWVVVEGMDVVQKMEKLGSK-----SGKPIKKVVISDSGE 158
W+ + Y++ + G K C V E D+ M+ +GSK I+KVV S S
Sbjct: 68 WIKL-YDYMMTFISGEKLCMQNVAYEFEDISLCMDVVGSKCIPTLQSTDIEKVVNSTSAY 126
Query: 157 LD*SCLVVNSGISKYVRKNYLDLMFVIAIKCREK-SC 50
L+ S + G + R +++ A+K E SC
Sbjct: 127 LENSESDLTLGCFQIQRFQEESTLYIRALKSSEPVSC 163
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 25.8 bits (54), Expect = 5.4
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = -2
Query: 415 YLRAYLLR*EFQIKAYWAWNFING---ECWTEYKWVSIFYNHSSDSLVG*KTCSIWVVVE 245
Y+R + LR + +WAW F G C K+V F S V + +W +
Sbjct: 213 YVRFFKLRHTPFSRPWWAWLFFTGFFLSCTISTKYVGFFTFLSIGLSVCLELWYLWDIKT 272
Query: 244 GMDV 233
G+ V
Sbjct: 273 GLTV 276
>SPAC5D6.05 |sep11|pmc6, med18|mediator complex subunit Pmc6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 207
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 234 TSIPSTTTQILHVFYPTKESELWL*KIETHL 326
T IPS I F+P E + W+ + TH+
Sbjct: 143 TLIPSQQRSIKPPFHPMNEEQPWILHVYTHV 173
>SPBC1604.05 |pgi1||glucose-6-phosphate isomerase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -2
Query: 202 SGKPIKKVVISDSGELD*SCLVVNSGISKYVRKNYLDLMFV 80
+GKPIK +V G D ++V + Y ++N L+L FV
Sbjct: 150 TGKPIKSIVNVGIGGSDLGPVMVTEALKPYGQEN-LELHFV 189
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 25.4 bits (53), Expect = 7.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 214 VFPFSAQHPYLQPQPKYYMFSIQ 282
+FP PYL P +Y +S++
Sbjct: 36 IFPTHYDQPYLNEAPSWYKYSLE 58
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -3
Query: 372 HTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKH 268
H P S++ P +NG F + +P+ W + H
Sbjct: 345 HVVPEYSSISTFVPPSNGLMVFTSGIPSVWAEIDH 379
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.0 bits (52), Expect = 9.5
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +3
Query: 162 PESEMTTFFIGLPLLEPSFSIFCTTSIPST---TTQILHVFYPTKES 293
P S +T PLL S S +TSIP T TT + PT S
Sbjct: 373 PASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSS 419
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,649,503
Number of Sequences: 5004
Number of extensions: 57732
Number of successful extensions: 175
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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