Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00004
(579 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 122 2e-28
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 122 2e-28
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 113 6e-26
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 113 6e-26
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 113 6e-26
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 113 6e-26
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 113 6e-26
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 80 1e-15
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 5e-14
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 71 8e-13
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 42 2e-04
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 42 2e-04
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 36 0.027
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 33 0.19
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 32 0.34
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 31 0.78
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 30 1.0
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 30 1.4
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 29 1.8
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 28 4.2
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 28 4.2
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 28 4.2
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 28 4.2
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 7.3
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 122 bits (294), Expect = 2e-28
Identities = 64/147 (43%), Positives = 91/147 (61%)
Frame = +2
Query: 14 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLYGLQYP 193
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED G+
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDSDC--GIDSE 58
Query: 194 EGIHPPPGVEASWWR*ETQEENYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECT 373
I+ +E + +++ Y+TP LAVL++YK+DENGKI RLR+EC
Sbjct: 59 ATIYV--NLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQ 116
Query: 374 GEQCGAGVFMAVMEDRHYCGKCHSTMV 454
CG GVFMA +RHYCG+CH T+V
Sbjct: 117 QPSCGGGVFMAQHANRHYCGRCHDTLV 143
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 122 bits (294), Expect = 2e-28
Identities = 64/147 (43%), Positives = 91/147 (61%)
Frame = +2
Query: 14 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLYGLQYP 193
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED G+
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDSDC--GIDSE 58
Query: 194 EGIHPPPGVEASWWR*ETQEENYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECT 373
I+ +E + +++ Y+TP LAVL++YK+DENGKI RLR+EC
Sbjct: 59 ATIYV--NLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQ 116
Query: 374 GEQCGAGVFMAVMEDRHYCGKCHSTMV 454
CG GVFMA +RHYCG+CH T+V
Sbjct: 117 QPSCGGGVFMAQHANRHYCGRCHDTLV 143
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 61 IQKESTLH 68
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 57 SDYNIQKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 61 IQKESTLH 68
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 137 IQKESTLH 144
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 213 IQKESTLH 220
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 289 IQKESTLH 296
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 365 IQKESTLH 372
Score = 111 bits (267), Expect = 3e-25
Identities = 56/68 (82%), Positives = 59/68 (86%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 441 IQKESTLH 448
Score = 93.5 bits (222), Expect = 1e-19
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 148
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 57 SDYNIQKESTLHLV 70
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 133 SDYNIQKESTLHLV 146
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 209 SDYNIQKESTLHLV 222
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 285 SDYNIQKESTLHLV 298
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 361 SDYNIQKESTLHLV 374
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 437 SDYNIQKESTLHLV 450
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 61 IQKESTLH 68
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 137 IQKESTLH 144
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 213 IQKESTLH 220
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 289 IQKESTLH 296
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 365 IQKESTLH 372
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 517 IQKESTLH 524
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 593 IQKESTLH 600
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 669 IQKESTLH 676
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 745 IQKESTLH 752
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 821 IQKESTLH 828
Score = 111 bits (267), Expect = 3e-25
Identities = 56/68 (82%), Positives = 59/68 (86%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 441 IQKESTLH 448
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 57 SDYNIQKESTLHLV 70
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 133 SDYNIQKESTLHLV 146
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 209 SDYNIQKESTLHLV 222
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 285 SDYNIQKESTLHLV 298
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 361 SDYNIQKESTLHLV 374
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 437 SDYNIQKESTLHLV 450
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 513 SDYNIQKESTLHLV 526
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 589 SDYNIQKESTLHLV 602
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 665 SDYNIQKESTLHLV 678
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 741 SDYNIQKESTLHLV 754
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 817 SDYNIQKESTLHLV 830
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 61 IQKESTLH 68
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 137 IQKESTLH 144
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 213 IQKESTLH 220
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 289 IQKESTLH 296
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 365 IQKESTLH 372
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 441 IQKESTLH 448
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 517 IQKESTLH 524
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 593 IQKESTLH 600
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 669 IQKESTLH 676
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 745 IQKESTLH 752
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 821 IQKQSTLH 828
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 57 SDYNIQKESTLHLV 70
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 133 SDYNIQKESTLHLV 146
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 209 SDYNIQKESTLHLV 222
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 285 SDYNIQKESTLHLV 298
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 361 SDYNIQKESTLHLV 374
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 437 SDYNIQKESTLHLV 450
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 513 SDYNIQKESTLHLV 526
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 589 SDYNIQKESTLHLV 602
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 665 SDYNIQKESTLHLV 678
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 741 SDYNIQKESTLHLV 754
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQK+STLHLV
Sbjct: 817 SDYNIQKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 113 bits (273), Expect = 6e-26
Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL--YG 181
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL Y
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 182 LQYPEGIH 205
+Q +H
Sbjct: 61 IQKESTLH 68
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 177 TDYNIQKESTLHLV 218
+DYNIQKESTLHLV
Sbjct: 57 SDYNIQKESTLHLV 70
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 172
M I VKTLTGK I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKT 55
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.5 bits (175), Expect = 5e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 118
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 70.5 bits (165), Expect = 8e-13
Identities = 30/58 (51%), Positives = 44/58 (75%)
Frame = +2
Query: 5 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLY 178
K+ + VKTL GKTI + ++ +DT+E +K K+Q+K G+PP+QQRLIF QLE+ R L+
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALF 217
Score = 33.9 bits (74), Expect = 0.084
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 115
M + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 59 MLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE---DGRTLY 178
++I+V+ G+T TL+ SDT+ +VKAKI +K I PN Q+L+ L+ D TL+
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 179 GLQYPEG 199
+ G
Sbjct: 162 DNSFENG 168
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 115
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2
Query: 5 KMQIFVKTLTGKTITLEV 58
++ +FVKT TGKTIT+ +
Sbjct: 180 EIDVFVKTYTGKTITISI 197
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +2
Query: 14 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 151
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 5 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 163
+ QIFVK L G + ++ DT+ ++K I+ + IP + L F+GK+LED
Sbjct: 153 EFQIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLED 204
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 35.5 bits (78), Expect = 0.027
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLED 163
+ + +TLT LE+ TI VKA + ++G P Q+LI+ GK L+D
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDD 105
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +2
Query: 5 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 163
K Q FV+ L GKT TL V SDT+E K ++ R+ + GK L D
Sbjct: 42 KFQYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSD 89
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 31.9 bits (69), Expect = 0.34
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +2
Query: 38 KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 163
K I +E++ +T+ +K +I+ + + N+Q L+F G +L+D
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKD 73
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 30.7 bits (66), Expect = 0.78
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +2
Query: 32 TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLYGLQYPEG 199
+G L V SDTI VK I + + R++ K LED TL EG
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEG 236
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 30.7 bits (66), Expect = 0.78
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 50 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLYGLQYPEG 199
L V SDTI ++K +I + + R++ GK LED +L EG
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEG 259
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 20 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLYGLQYPEG 199
+ TL G+TI V P + I + K+ EG+P + A D + +++P+
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMPMRR-----ASSDKGDLLVQFDVKFPDK 333
Query: 200 IHP 208
I+P
Sbjct: 334 INP 336
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 29 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL 175
L G I +E++ DTI V + G+ ++QRL+ K+L+ +TL
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTL 237
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/59 (20%), Positives = 32/59 (54%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLYGL 184
+Q+ + + TGK++ + VE + +E D+EG+ + L+ + ++ ++ ++ L
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQEVINVFSL 1207
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 50 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLYGLQYPEG 199
L V SDTI +K +I GI R K LED TL EG
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREG 225
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +2
Query: 29 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 163
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKD 628
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +2
Query: 29 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 163
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKD 628
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 115
M + +KT TGKTIT+E S VK +++ K+G+
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGV 31
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 38 KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRL 136
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,057,425
Number of Sequences: 27780
Number of extensions: 270494
Number of successful extensions: 781
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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