Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00002
(719 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 175 3e-44
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 173 1e-43
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 173 1e-43
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 170 7e-43
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 170 7e-43
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 170 7e-43
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 169 2e-42
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 169 2e-42
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 169 2e-42
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 154 6e-38
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 146 1e-35
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 141 4e-34
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 104 5e-23
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 85 4e-17
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 76 3e-14
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 67 1e-11
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 56 2e-08
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 51 7e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 51 9e-07
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 48 5e-06
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 37 0.015
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 36 0.027
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 36 0.027
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 35 0.047
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 35 0.047
At1g51090.1 68414.m05744 heavy-metal-associated domain-containin... 35 0.062
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 34 0.082
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 34 0.11
At3g24550.1 68416.m03083 protein kinase family protein contains ... 33 0.14
At1g18280.1 68414.m02282 protease inhibitor/seed storage/lipid t... 33 0.19
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 33 0.25
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 33 0.25
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 33 0.25
At1g10620.1 68414.m01204 protein kinase family protein contains ... 33 0.25
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 33 0.25
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 32 0.33
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 32 0.33
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 32 0.44
At3g09000.1 68416.m01053 proline-rich family protein 32 0.44
At3g05690.1 68416.m00636 CCAAT-binding transcription factor (CBF... 32 0.44
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 32 0.44
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 32 0.44
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 32 0.44
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 32 0.44
At5g43500.2 68418.m05318 expressed protein 31 0.58
At5g43500.1 68418.m05319 expressed protein 31 0.58
At5g38560.1 68418.m04662 protein kinase family protein contains ... 31 0.58
At1g32190.1 68414.m03959 expressed protein 31 0.58
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 31 0.77
At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family... 31 0.77
At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identic... 31 0.77
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 31 0.77
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 31 0.77
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 31 0.77
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 31 1.0
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 31 1.0
At3g28790.1 68416.m03593 expressed protein 31 1.0
At2g40070.1 68415.m04923 expressed protein 31 1.0
At5g08550.1 68418.m01017 expressed protein 30 1.3
At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family... 30 1.3
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 30 1.8
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 29 2.3
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 2.3
At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid t... 29 2.3
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 29 2.3
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 29 2.3
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 2.3
At1g11130.1 68414.m01274 leucine-rich repeat family protein / pr... 29 2.3
At4g00060.1 68417.m00006 nucleotidyltransferase family protein c... 29 3.1
At1g15280.2 68414.m01829 glycine-rich protein 29 3.1
At1g15280.1 68414.m01828 glycine-rich protein 29 3.1
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 29 4.1
At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family... 29 4.1
At4g24175.1 68417.m03469 expressed protein 29 4.1
At4g02430.2 68417.m00330 pre-mRNA splicing factor, putative / SR... 29 4.1
At1g61080.1 68414.m06877 proline-rich family protein 29 4.1
At5g61090.1 68418.m07665 proline-rich family protein contains pr... 28 5.4
At4g01985.1 68417.m00265 expressed protein 28 5.4
At4g00890.1 68417.m00120 proline-rich family protein contains pr... 28 5.4
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 28 5.4
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 28 5.4
At3g20560.1 68416.m02603 thioredoxin family protein contains Pfa... 28 5.4
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 5.4
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 28 5.4
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 28 7.2
At5g29020.1 68418.m03592 hypothetical protein 28 7.2
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 28 7.2
At4g34440.1 68417.m04894 protein kinase family protein contains ... 28 7.2
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 28 7.2
At4g19110.1 68417.m02819 protein kinase, putative contains prote... 28 7.2
At3g51290.1 68416.m05614 proline-rich family protein 28 7.2
At2g33780.1 68415.m04143 VQ motif-containing protein contains PF... 28 7.2
At2g23990.2 68415.m02866 plastocyanin-like domain-containing pro... 28 7.2
At2g23990.1 68415.m02865 plastocyanin-like domain-containing pro... 28 7.2
At2g22510.1 68415.m02670 hydroxyproline-rich glycoprotein family... 28 7.2
At2g18840.1 68415.m02194 integral membrane Yip1 family protein c... 28 7.2
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 28 7.2
At1g50950.1 68414.m05728 thioredoxin-related contains weak hit t... 28 7.2
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 28 7.2
At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family... 27 9.5
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 27 9.5
At3g56590.1 68416.m06293 hydroxyproline-rich glycoprotein family... 27 9.5
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 27 9.5
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 27 9.5
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 27 9.5
At2g39440.1 68415.m04841 expressed protein 27 9.5
At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3) ident... 27 9.5
At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3) ident... 27 9.5
At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3) ident... 27 9.5
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 27 9.5
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 175 bits (425), Expect = 3e-44
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2
Query: 2 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 181
ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH
Sbjct: 116 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 175
Query: 182 AILRLDLAGRDLTDYLMKILTERG 253
AILRLDLAGRDLTDYLMKILTERG
Sbjct: 176 AILRLDLAGRDLTDYLMKILTERG 199
Score = 152 bits (368), Expect = 3e-37
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +1
Query: 256 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 435
SFTT+AEREIVRD+KEKL Y+ALD+EQEM TA +SSS+EKSYELPDGQVITIG ERFRCP
Sbjct: 201 SFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCP 260
Query: 436 EALFQPSFLGMEACGIHETTYNSI 507
E LFQPS +GMEA GIHETTYNSI
Sbjct: 261 EVLFQPSLVGMEAAGIHETTYNSI 284
Score = 96.3 bits (229), Expect = 2e-20
Identities = 48/69 (69%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 KCDVDIRKDLYANTVLSGGTTCTLE-SPTVCKRNHSSRPSTMKIKIIAPPERKYSVWIGG 686
KCDVDIRKDLY N VLSGGTT + + K + PS+MKIK++APPERKYSVWIGG
Sbjct: 286 KCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 345
Query: 687 SILASLSTF 713
SILASLSTF
Sbjct: 346 SILASLSTF 354
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 173 bits (420), Expect = 1e-43
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 2 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 181
ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH
Sbjct: 116 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 175
Query: 182 AILRLDLAGRDLTDYLMKILTERG 253
AILRLDLAGRDLTD+LMKILTERG
Sbjct: 176 AILRLDLAGRDLTDHLMKILTERG 199
Score = 146 bits (353), Expect = 2e-35
Identities = 68/84 (80%), Positives = 76/84 (90%)
Frame = +1
Query: 256 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 435
SFTTTAEREIVRD+KEKL Y+ALDFEQE+ T+ +SSS+EKS+ELPDGQVITIG ERFRCP
Sbjct: 201 SFTTTAEREIVRDMKEKLSYIALDFEQELETSKTSSSVEKSFELPDGQVITIGAERFRCP 260
Query: 436 EALFQPSFLGMEACGIHETTYNSI 507
E LFQPS +GME GIHETTYNSI
Sbjct: 261 EVLFQPSMIGMENPGIHETTYNSI 284
Score = 95.5 bits (227), Expect = 3e-20
Identities = 48/69 (69%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 KCDVDIRKDLYANTVLSGGTTCTLE-SPTVCKRNHSSRPSTMKIKIIAPPERKYSVWIGG 686
KCDVDIRKDLY N VLSGGTT + K + PS+MKIK++APPERKYSVWIGG
Sbjct: 286 KCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 345
Query: 687 SILASLSTF 713
SILASLSTF
Sbjct: 346 SILASLSTF 354
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 173 bits (420), Expect = 1e-43
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 2 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 181
ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH
Sbjct: 116 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 175
Query: 182 AILRLDLAGRDLTDYLMKILTERG 253
AILRLDLAGRDLTD+LMKILTERG
Sbjct: 176 AILRLDLAGRDLTDHLMKILTERG 199
Score = 144 bits (350), Expect = 4e-35
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +1
Query: 256 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 435
SFTTTAEREIVRD+KEKL Y+ALD+EQE+ T+ +SSS+EKS+ELPDGQVITIG ERFRCP
Sbjct: 201 SFTTTAEREIVRDMKEKLSYIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCP 260
Query: 436 EALFQPSFLGMEACGIHETTYNSI 507
E LFQPS +GME GIHETTYNSI
Sbjct: 261 EVLFQPSMIGMENPGIHETTYNSI 284
Score = 95.5 bits (227), Expect = 3e-20
Identities = 48/69 (69%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 KCDVDIRKDLYANTVLSGGTTCTLE-SPTVCKRNHSSRPSTMKIKIIAPPERKYSVWIGG 686
KCDVDIRKDLY N VLSGGTT + K + PS+MKIK++APPERKYSVWIGG
Sbjct: 286 KCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 345
Query: 687 SILASLSTF 713
SILASLSTF
Sbjct: 346 SILASLSTF 354
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 170 bits (414), Expect = 7e-43
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 2 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 181
ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPH
Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPH 175
Query: 182 AILRLDLAGRDLTDYLMKILTERG 253
AILRLDLAGRDLTDYLMKILTERG
Sbjct: 176 AILRLDLAGRDLTDYLMKILTERG 199
Score = 149 bits (362), Expect = 1e-36
Identities = 69/83 (83%), Positives = 77/83 (92%)
Frame = +1
Query: 259 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 438
FTTTAEREIVRDIKEKL +VA+D+EQEM T+ +SSS+EK+YELPDGQVITIG ERFRCPE
Sbjct: 202 FTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPE 261
Query: 439 ALFQPSFLGMEACGIHETTYNSI 507
LFQPSF+GMEA GIHETTYNSI
Sbjct: 262 VLFQPSFVGMEAAGIHETTYNSI 284
Score = 96.7 bits (230), Expect = 1e-20
Identities = 48/69 (69%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 KCDVDIRKDLYANTVLSGGTTCTLE-SPTVCKRNHSSRPSTMKIKIIAPPERKYSVWIGG 686
KCDVDIRKDLY N VLSGGTT + + K + PS+MKIK++APPERKYSVWIGG
Sbjct: 286 KCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 345
Query: 687 SILASLSTF 713
SILASLSTF
Sbjct: 346 SILASLSTF 354
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 170 bits (414), Expect = 7e-43
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 2 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 181
ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPH
Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPH 175
Query: 182 AILRLDLAGRDLTDYLMKILTERG 253
AILRLDLAGRDLTDYLMKILTERG
Sbjct: 176 AILRLDLAGRDLTDYLMKILTERG 199
Score = 149 bits (362), Expect = 1e-36
Identities = 69/83 (83%), Positives = 77/83 (92%)
Frame = +1
Query: 259 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 438
FTTTAEREIVRDIKEKL +VA+D+EQEM T+ +SSS+EK+YELPDGQVITIG ERFRCPE
Sbjct: 202 FTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPE 261
Query: 439 ALFQPSFLGMEACGIHETTYNSI 507
LFQPSF+GMEA GIHETTYNSI
Sbjct: 262 VLFQPSFVGMEAAGIHETTYNSI 284
Score = 96.7 bits (230), Expect = 1e-20
Identities = 48/69 (69%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 KCDVDIRKDLYANTVLSGGTTCTLE-SPTVCKRNHSSRPSTMKIKIIAPPERKYSVWIGG 686
KCDVDIRKDLY N VLSGGTT + + K + PS+MKIK++APPERKYSVWIGG
Sbjct: 286 KCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 345
Query: 687 SILASLSTF 713
SILASLSTF
Sbjct: 346 SILASLSTF 354
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 170 bits (414), Expect = 7e-43
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 2 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 181
ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPH
Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPH 175
Query: 182 AILRLDLAGRDLTDYLMKILTERG 253
AILRLDLAGRDLTDYLMKILTERG
Sbjct: 176 AILRLDLAGRDLTDYLMKILTERG 199
Score = 149 bits (362), Expect = 1e-36
Identities = 69/83 (83%), Positives = 77/83 (92%)
Frame = +1
Query: 259 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 438
FTTTAEREIVRDIKEKL +VA+D+EQEM T+ +SSS+EK+YELPDGQVITIG ERFRCPE
Sbjct: 202 FTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPE 261
Query: 439 ALFQPSFLGMEACGIHETTYNSI 507
LFQPSF+GMEA GIHETTYNSI
Sbjct: 262 VLFQPSFVGMEAAGIHETTYNSI 284
Score = 96.7 bits (230), Expect = 1e-20
Identities = 48/69 (69%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 KCDVDIRKDLYANTVLSGGTTCTLE-SPTVCKRNHSSRPSTMKIKIIAPPERKYSVWIGG 686
KCDVDIRKDLY N VLSGGTT + + K + PS+MKIK++APPERKYSVWIGG
Sbjct: 286 KCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 345
Query: 687 SILASLSTF 713
SILASLSTF
Sbjct: 346 SILASLSTF 354
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 169 bits (411), Expect = 2e-42
Identities = 82/84 (97%), Positives = 82/84 (97%)
Frame = +2
Query: 2 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 181
ANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH
Sbjct: 116 ANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 175
Query: 182 AILRLDLAGRDLTDYLMKILTERG 253
AILRLDLAGRDLTD LMKILTERG
Sbjct: 176 AILRLDLAGRDLTDSLMKILTERG 199
Score = 150 bits (364), Expect = 8e-37
Identities = 71/83 (85%), Positives = 76/83 (91%)
Frame = +1
Query: 259 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 438
FTTTAEREIVRDIKEKL YVALD+EQE+ TA SSSS+EK+YELPDGQVITIG ERFRCPE
Sbjct: 202 FTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPE 261
Query: 439 ALFQPSFLGMEACGIHETTYNSI 507
LFQPS +GMEA GIHETTYNSI
Sbjct: 262 VLFQPSLIGMEAPGIHETTYNSI 284
Score = 94.7 bits (225), Expect = 6e-20
Identities = 47/69 (68%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 KCDVDIRKDLYANTVLSGGTTCTLE-SPTVCKRNHSSRPSTMKIKIIAPPERKYSVWIGG 686
KCDVDIRKDLY N VLSGG+T + + K + PS+MKIK++APPERKYSVWIGG
Sbjct: 286 KCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 345
Query: 687 SILASLSTF 713
SILASLSTF
Sbjct: 346 SILASLSTF 354
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 169 bits (411), Expect = 2e-42
Identities = 82/84 (97%), Positives = 82/84 (97%)
Frame = +2
Query: 2 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 181
ANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH
Sbjct: 116 ANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 175
Query: 182 AILRLDLAGRDLTDYLMKILTERG 253
AILRLDLAGRDLTD LMKILTERG
Sbjct: 176 AILRLDLAGRDLTDALMKILTERG 199
Score = 153 bits (370), Expect = 1e-37
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = +1
Query: 256 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 435
SFTTTAEREIVRDIKEKLCY+ALD+EQE+ TA +SSS+EK+YELPDGQVITIG+ERFRCP
Sbjct: 201 SFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCP 260
Query: 436 EALFQPSFLGMEACGIHETTYNSI 507
E L+QPS +GME GIHETTYNSI
Sbjct: 261 EVLYQPSMIGMENAGIHETTYNSI 284
Score = 96.3 bits (229), Expect = 2e-20
Identities = 48/69 (69%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 KCDVDIRKDLYANTVLSGGTTCTLE-SPTVCKRNHSSRPSTMKIKIIAPPERKYSVWIGG 686
KCDVDIRKDLY N VLSGGTT + + K + PS+MKIK++APPERKYSVWIGG
Sbjct: 286 KCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 345
Query: 687 SILASLSTF 713
SILASLSTF
Sbjct: 346 SILASLSTF 354
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 169 bits (411), Expect = 2e-42
Identities = 82/84 (97%), Positives = 82/84 (97%)
Frame = +2
Query: 2 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 181
ANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH
Sbjct: 116 ANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 175
Query: 182 AILRLDLAGRDLTDYLMKILTERG 253
AILRLDLAGRDLTD LMKILTERG
Sbjct: 176 AILRLDLAGRDLTDALMKILTERG 199
Score = 153 bits (370), Expect = 1e-37
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = +1
Query: 256 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 435
SFTTTAEREIVRDIKEKLCY+ALD+EQE+ TA +SSS+EK+YELPDGQVITIG+ERFRCP
Sbjct: 201 SFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCP 260
Query: 436 EALFQPSFLGMEACGIHETTYNSI 507
E L+QPS +GME GIHETTYNSI
Sbjct: 261 EVLYQPSMIGMENAGIHETTYNSI 284
Score = 96.3 bits (229), Expect = 2e-20
Identities = 48/69 (69%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 KCDVDIRKDLYANTVLSGGTTCTLE-SPTVCKRNHSSRPSTMKIKIIAPPERKYSVWIGG 686
KCDVDIRKDLY N VLSGGTT + + K + PS+MKIK++APPERKYSVWIGG
Sbjct: 286 KCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 345
Query: 687 SILASLSTF 713
SILASLSTF
Sbjct: 346 SILASLSTF 354
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 154 bits (373), Expect = 6e-38
Identities = 72/83 (86%), Positives = 78/83 (93%)
Frame = +2
Query: 5 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 184
NREKMTQIMFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHA
Sbjct: 118 NREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHA 177
Query: 185 ILRLDLAGRDLTDYLMKILTERG 253
ILRLDLAGRDLT+YL KI+ ERG
Sbjct: 178 ILRLDLAGRDLTEYLTKIMMERG 200
Score = 140 bits (340), Expect = 6e-34
Identities = 62/84 (73%), Positives = 75/84 (89%)
Frame = +1
Query: 256 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 435
++TT+AEREIVRDIKEKLCY+A+D+EQEM A +SS+++++YELPDGQVITIG ERFRCP
Sbjct: 202 TYTTSAEREIVRDIKEKLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVITIGAERFRCP 261
Query: 436 EALFQPSFLGMEACGIHETTYNSI 507
E LFQ S +GME GIHETTYNSI
Sbjct: 262 EVLFQTSLIGMETSGIHETTYNSI 285
Score = 92.7 bits (220), Expect = 2e-19
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 KCDVDIRKDLYANTVLSGGTTCTLE-SPTVCKRNHSSRPSTMKIKIIAPPERKYSVWIGG 686
KCDVDIRKDLY N VLSGGTT + + K ++ P +MKIK++APPERKYSVW+GG
Sbjct: 287 KCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGG 346
Query: 687 SILASLSTF 713
SILASLS+F
Sbjct: 347 SILASLSSF 355
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 146 bits (355), Expect = 1e-35
Identities = 66/84 (78%), Positives = 78/84 (92%)
Frame = +2
Query: 2 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 181
ANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH
Sbjct: 105 ANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPH 164
Query: 182 AILRLDLAGRDLTDYLMKILTERG 253
ILRLDL GRDLTDYL++I+TERG
Sbjct: 165 GILRLDLGGRDLTDYLIEIMTERG 188
Score = 121 bits (292), Expect = 4e-28
Identities = 56/84 (66%), Positives = 66/84 (78%)
Frame = +1
Query: 256 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 435
++TT+AEREIVRDIKEKLCYVALD+EQEM +++K+Y LPDGQ ITI ERF CP
Sbjct: 190 TYTTSAEREIVRDIKEKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCP 249
Query: 436 EALFQPSFLGMEACGIHETTYNSI 507
E LFQPS +G E+ GIHE T NSI
Sbjct: 250 EVLFQPSVIGKESSGIHEATRNSI 273
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 KCDVDIRKDLYANTVLSGGTTCTLE-SPTVCKRNHSSRPSTMKIKIIAPPERKYSVWIGG 686
KC VD R+D+Y N +++GGTT + K ++ PS+MK+K++ PPE + SVWIGG
Sbjct: 275 KCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGG 334
Query: 687 SILASLSTF 713
SILASLSTF
Sbjct: 335 SILASLSTF 343
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 141 bits (342), Expect = 4e-34
Identities = 68/87 (78%), Positives = 76/87 (87%)
Frame = +2
Query: 2 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 181
A+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ VPIYEG ALPH
Sbjct: 71 ADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPH 130
Query: 182 AILRLDLAGRDLTDYLMKILTERGSRS 262
AILRLDLAGR LT+YLMKI+ ERG S
Sbjct: 131 AILRLDLAGRHLTNYLMKIMMERGYTS 157
Score = 130 bits (314), Expect = 9e-31
Identities = 58/81 (71%), Positives = 69/81 (85%)
Frame = +1
Query: 265 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 444
T+AERE+VRDIKE+ Y+ALD+EQEM A SS+++++YELPDGQVITIG ERFRCPE L
Sbjct: 156 TSAEREVVRDIKEQFGYIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVL 215
Query: 445 FQPSFLGMEACGIHETTYNSI 507
FQPS +GME GIHE TYNSI
Sbjct: 216 FQPSLIGMETSGIHEKTYNSI 236
Score = 87.8 bits (208), Expect = 6e-18
Identities = 44/69 (63%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 KCDVDIRKDLYANTVLSGGTTCTLE-SPTVCKRNHSSRPSTMKIKIIAPPERKYSVWIGG 686
KCD DIRKDLY N VLSGGTT + K ++ + M+IKI+APPERKYSVWIGG
Sbjct: 238 KCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGG 297
Query: 687 SILASLSTF 713
SILASLST+
Sbjct: 298 SILASLSTY 306
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 104 bits (250), Expect = 5e-23
Identities = 44/83 (53%), Positives = 63/83 (75%)
Frame = +2
Query: 5 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 184
NREKM + MFE +N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY+ PH
Sbjct: 116 NREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHL 175
Query: 185 ILRLDLAGRDLTDYLMKILTERG 253
R+++AGR +T YL+ +L+ RG
Sbjct: 176 TKRMNVAGRHITAYLVDLLSRRG 198
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/89 (41%), Positives = 57/89 (64%)
Frame = +1
Query: 244 RARLSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNER 423
R + TA+ E VR+IKEKLCY++ D+++E ++ L K+Y LPDG+VI +G ER
Sbjct: 196 RRGYAMNKTADFETVREIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTER 255
Query: 424 FRCPEALFQPSFLGMEACGIHETTYNSIR 510
F+ PEALF P + +E G+ + + I+
Sbjct: 256 FQAPEALFTPELIDVEGDGMADMVFRCIQ 284
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Frame = +3
Query: 507 QKCDVDIRKDLYANTVLSGGTTCTLESP-------------TVCKRNHSSRPSTMKIKII 647
Q+ D+D R LY + VLSGG+T P TV K N ++++I
Sbjct: 284 QEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKK-LRLRIE 342
Query: 648 APPERKYSVWIGGSILASL 704
PP RK+ V++GG++LA +
Sbjct: 343 DPPRRKHMVYLGGAVLAGI 361
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 85.0 bits (201), Expect = 4e-17
Identities = 42/105 (40%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Frame = +2
Query: 5 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGY 169
+RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +H VP+ EGY
Sbjct: 134 SREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEGY 193
Query: 170 ALPHAILRLDLAGRDLTDYLMKILTERGSRSLPPPSGKSFVTSRR 304
+ I + +AG+D+T ++ +++ ERG ++PP SF +R+
Sbjct: 194 VIGSCIKSIPIAGKDVTLFIQQLMRERG-ENIPPED--SFDVARK 235
Score = 35.9 bits (79), Expect = 0.027
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 17/86 (19%)
Frame = +3
Query: 507 QKCDVDIRKDLYANTVLSGGTTCTLESPTVCKRN-----------HSSRPS------TMK 635
Q +D R+ LY N VLSGG+T + +R+ +++R ++
Sbjct: 314 QSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVE 373
Query: 636 IKIIAPPERKYSVWIGGSILASLSTF 713
+ +++ P ++++VW GGS+L+S F
Sbjct: 374 VNVVSHPVQRFAVWFGGSVLSSTPEF 399
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/92 (39%), Positives = 56/92 (60%)
Frame = +2
Query: 8 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 187
REK ++MFE + PA+++A VL+ +A+GR T +V+D G G + P+++GY L A+
Sbjct: 140 REKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAV 199
Query: 188 LRLDLAGRDLTDYLMKILTERGSRSLPPPSGK 283
+ L G LTD L+K L +G + P S K
Sbjct: 200 VSSPLGGEFLTDCLLKSLESKGIKIRPRYSFK 231
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/72 (43%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Frame = +3
Query: 510 KCDVDIRKDLYANTVLSGGTTCTLESPTVCKRNH-SSRPSTMKIKIIAP---PERKYSVW 677
KCDVDIR++LY++ +L+GGT+ + +++ P + ++K++A ER++SVW
Sbjct: 347 KCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVW 406
Query: 678 IGGSILASLSTF 713
IGGSILASL +F
Sbjct: 407 IGGSILASLGSF 418
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +1
Query: 256 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 435
S+ +R IV DIK+ +C V + + S+ SYELPDGQ + IG +RF+ P
Sbjct: 253 SYKLFCQRMIVGDIKDSICRVP---DTPYDDKSYSNIPTTSYELPDGQTLEIGADRFKVP 309
Query: 436 EALFQPSFL 462
+ +F PS +
Sbjct: 310 DVMFNPSIV 318
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/73 (46%), Positives = 43/73 (58%)
Frame = +2
Query: 2 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 181
A RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG
Sbjct: 102 AIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHI 161
Query: 182 AILRLDLAGRDLT 220
A R +L G +LT
Sbjct: 162 ASKRFELGGTELT 174
Score = 54.4 bits (125), Expect = 7e-08
Identities = 31/68 (45%), Positives = 41/68 (60%)
Frame = +1
Query: 286 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 465
V +KE+ A E E+A + + + + LPDGQVI+IG ER+ EALFQPS LG
Sbjct: 195 VEKLKEQYANCA---EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILG 251
Query: 466 MEACGIHE 489
+E GI E
Sbjct: 252 LEEHGIVE 259
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +3
Query: 531 KDLYANTVLSGGTTCTLESPTVCKRNHSSRPSTMKIKIIAPPERK------YSVWIGGSI 692
+ L NTVL GGTT + ++ + S ++ ++ PPE YS W+GG+I
Sbjct: 274 RQLLENTVLCGGTTSMTGFESRFQKEANLCSSAIRPTLVKPPEYMPENLGMYSAWVGGAI 333
Query: 693 LASLSTFP 716
LA + FP
Sbjct: 334 LAKV-VFP 340
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +1
Query: 286 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 465
VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+ E LFQP G
Sbjct: 309 VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAG 363
Query: 466 MEACGIHE 489
M A +H+
Sbjct: 364 MRAMSLHQ 371
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +2
Query: 26 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 166
++F+ N PA+ QAVL+LYA+ RT+GIV++ G V +PI G
Sbjct: 225 VLFD-MNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHG 270
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 540 YANTVLSGGTTCTLESPTVCKRNHSSR-PSTMK--IKIIAPPERKYSVWIGGSILASLST 710
+ VL+GG+ C +R PS++ I++I PP + W G ++++LS
Sbjct: 392 FKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSI 451
Query: 711 FP 716
FP
Sbjct: 452 FP 453
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 51.2 bits (117), Expect = 7e-07
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 10/86 (11%)
Frame = +2
Query: 23 QIMFETFNTPAMYVAI-QAVLSLYASGRTT---------GIVLDSGDGVSHTVPIYEGYA 172
+++FE F ++Y+A Q+++ LY + R +V+D G +H VP+ +
Sbjct: 115 ELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFT 174
Query: 173 LPHAILRLDLAGRDLTDYLMKILTER 250
L HAI R+DL G+ T+YL ++++ R
Sbjct: 175 LNHAIKRIDLGGKAFTNYLKELVSYR 200
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 256 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS-YELPDGQVITIG 414
S E +V D KEKLC+V+LD +++ A + ++L KS Y LPDG T G
Sbjct: 201 SINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKG 254
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/82 (30%), Positives = 39/82 (47%)
Frame = +1
Query: 268 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 447
T + V+D + +++L E+E K ++ + I + NERF PE LF
Sbjct: 250 THTKGYVKDPQAAKRFLSLS-EKESVVVMDKVGERKKADMNKNE-IDLTNERFLVPETLF 307
Query: 448 QPSFLGMEACGIHETTYNSIRS 513
QP+ LGM G+ E +I S
Sbjct: 308 QPADLGMNQAGLAECIVRAINS 329
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 513 CDVDIRKDLYANTVLSGGTTCTLESPTVCKRN-HSSRPSTMKIKIIAPPERKYSVWIGGS 689
C ++ LY + +L+GG+T + + P +KI + VW GGS
Sbjct: 330 CHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGS 389
Query: 690 ILASLSTF 713
+LAS F
Sbjct: 390 LLASSPDF 397
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = +2
Query: 5 NREKMTQIMFETFNTPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGY 169
+R KM +++FET+ PA+ + A S L+ + GIVL G +H++P +G
Sbjct: 131 SRSKMAELLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGE 190
Query: 170 ALPHAILRLDLAGRDLTDYLMKILT 244
+ R ++ G +TDYL ++L+
Sbjct: 191 PIYKGSSRTNIGGYHVTDYLKQLLS 215
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +1
Query: 274 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP---DGQVITIGNERFRCPEAL 444
E E+ R + +L + F Q++ S +S E P + I IG ERFRCPE L
Sbjct: 544 EAELAR-LSSRLQEIDPTFVQKVEGELSQTSGEVPRVRPLTEEDYKIVIGIERFRCPEIL 602
Query: 445 FQPSFLGMEACGIHETTYNSIR 510
F P+ +G++ G+ E SIR
Sbjct: 603 FHPNLIGIDQVGLDEMAGTSIR 624
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +1
Query: 286 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 465
VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+ E LFQP G
Sbjct: 309 VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAG 363
Query: 466 M 468
+
Sbjct: 364 I 364
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +2
Query: 26 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 166
++F+ N PA+ QAVL+LYA+ RT+GIV++ G V +PI G
Sbjct: 225 VLFD-MNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHG 270
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 36.7 bits (81), Expect = 0.015
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
S PP +PS P T PV PP TP+ SPTP P + +PTPS
Sbjct: 98 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 143
Score = 36.7 bits (81), Expect = 0.015
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
S PP +PS P T PV PP TP+ SPTP P + +PTPS
Sbjct: 116 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 161
Score = 35.5 bits (78), Expect = 0.036
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
PP +PS P T PV PP TP+ SPTP P + +PTPS
Sbjct: 83 PPPPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 125
Score = 35.5 bits (78), Expect = 0.036
Identities = 21/48 (43%), Positives = 23/48 (47%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
S PP +PS P T PV PP TP+ SPTP T SP P
Sbjct: 134 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPP 179
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP----CPSTKDTHSPTP 185
S PP +PS P P P S +P V+PTP PS D +PTP
Sbjct: 182 SPPPPTPTPSVPSPPDVTPTPPTPSVPSPPDVTPTPPTPSVPSPPDV-TPTP 232
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTKDTHSP 179
S PP P+ P PV PP TP+ SP TP P T SP
Sbjct: 164 SPTPPV--PTDPMPSPPPPVSPPPPTPTPSVPSPPDVTPTPPTPSVPSP 210
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 35.9 bits (79), Expect = 0.027
Identities = 20/64 (31%), Positives = 26/64 (40%)
Frame = +3
Query: 3 PTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 182
PT + P + +PP T P T PVV P + P PTP P +PT
Sbjct: 142 PTTKPPPSTPKPPHHKPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVVTPPTPT 201
Query: 183 PSCV 194
P +
Sbjct: 202 PPVI 205
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +3
Query: 21 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 194
P S K T+PP ++P P ++ PP S P P P P T +PTP V
Sbjct: 124 PPSTPKPPTKPPPSTPKPPTTK------PPPSTPKPPHHKPPPTPCPPPTPTPTPPVV 175
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 PTERR*PRSCSKHSTRPPCTSPSKPCSR-CTRPVVPPVSCWTPATVS-PTPCPSTKDTHS 176
P + P + +T+PP ++P P + P PP TP V+ PTP P +
Sbjct: 130 PPTKPPPSTPKPPTTKPPPSTPKPPHHKPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPT 189
Query: 177 PTPSCV 194
PTP V
Sbjct: 190 PTPPVV 195
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +3
Query: 3 PTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 182
PT P + + PP +P P T PVV P + P PTP P +PT
Sbjct: 166 PTPTPTPPVVTPPTPTPPVITPPTP----TPPVVTPPTPTPPVITPPTPTPPVITPPTPT 221
Query: 183 PSCV 194
P V
Sbjct: 222 PPVV 225
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 194
PP +P P T PV+ P + P PTP P +PTP V
Sbjct: 192 PPVVTPPTP----TPPVITPPTPTPPVITPPTPTPPVVTPPTPTPPVV 235
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
PP +P P T PV+ P + P PTP P +PTP
Sbjct: 202 PPVITPPTP----TPPVITPPTPTPPVVTPPTPTPPVVTPPTPTP 242
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = +3
Query: 3 PTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 182
P+ + P + +PP T P + PP C P +PTP P +PT
Sbjct: 125 PSTPKPPTKPPPSTPKPPTTKPPPSTPKPPHHKPPPTPCPPP---TPTPTPPVVTPPTPT 181
Query: 183 PSCV 194
P +
Sbjct: 182 PPVI 185
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +3
Query: 51 PPCTSPSKPC---SRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 194
PP +P+ P T PV+ P + P PTP P +PTP +
Sbjct: 165 PPTPTPTPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVITPPTPTPPVI 215
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 161
PP +P P T PVV P + P PTP P T
Sbjct: 212 PPVITPPTP----TPPVVTPPTPTPPVVTPPTPTPPT 244
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 21 PRSCSKHSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 179
P+ + +P PC SP KP + +PV P PA +PTP PS K SP
Sbjct: 85 PKPAPPPAPKPVPCPSPPKPPAPTPKPVPPHGPPPKPAP-APTPAPSPKPAPSP 137
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +3
Query: 54 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
P PS P +PV PP TP P P P + +P P+
Sbjct: 48 PSPCPSPPPKPQPKPVPPPACPPTPPKPQPKPAPPPEPKPAPPPA 92
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCWTPATV-SPTPCPSTKDTHSPTPSCV 194
PP P P +P PP P P PCPS +PTP V
Sbjct: 64 PPPACPPTPPKPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPPAPTPKPV 112
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 45 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
T P P P ++PV PP P SP P P K +P+PS
Sbjct: 5 TPDPSPKPVAPPGPSSKPVAPPGPSPCP---SPPPKPQPKPPPAPSPS 49
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 35.1 bits (77), Expect = 0.047
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = +3
Query: 21 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS------PTPCPSTK-DTHSP 179
P + +T PP SP P + PPV+ PA ++ P P P+TK D+ SP
Sbjct: 78 PPASPPPATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSP 137
Query: 180 TPS 188
+PS
Sbjct: 138 SPS 140
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +3
Query: 45 TRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSPTPCPSTKDTHSPTP 185
T PP +P+ P P PPVS P T SP P + +P P
Sbjct: 24 TSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPP 72
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
S PP T+ P + P PP +P SP P P P
Sbjct: 49 SAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASPPPP 96
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 35.1 bits (77), Expect = 0.047
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = +3
Query: 21 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS------PTPCPSTK-DTHSP 179
P + +T PP SP P + PPV+ PA ++ P P P+TK D+ SP
Sbjct: 78 PPASPPPATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSP 137
Query: 180 TPS 188
+PS
Sbjct: 138 SPS 140
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +3
Query: 45 TRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSPTPCPSTKDTHSPTP 185
T PP +P+ P P PPVS P T SP P + +P P
Sbjct: 24 TSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPP 72
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
S PP T+ P + P PP +P SP P P P
Sbjct: 49 SAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASPPPP 96
>At1g51090.1 68414.m05744 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 171
Score = 34.7 bits (76), Expect = 0.062
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +3
Query: 48 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 197
+PP P P + T P P PA V P P P + +P P +W
Sbjct: 79 KPPQPQPQPP-QKPTAPAPAPAQAQAPALVRPAPVPVLVSSSAPQPMPMW 127
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 34.3 bits (75), Expect = 0.082
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 12 RR*PRSCSKHSTRPPCTSPSKPCSRCTR-PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
+R P C+ S+ PP S C R TR PVV P TP+ P PS SP+P
Sbjct: 378 QRSPGQCAAFSSLPPVDCGSFGCGRSTRPPVVVPSPPTTPSPGGSPPSPSI----SPSP 432
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/48 (47%), Positives = 24/48 (50%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
S PP T PS P S T P PP S +P SP P P T T PTP
Sbjct: 526 SPSPPITVPSPP-STPTSPGSPP-SPSSPTPSSPIPSPPTPST-PPTP 570
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 42 STRPPCTSPSKPC--SRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 194
STRPP PS P S P P +S P TV P + P+PS V
Sbjct: 403 STRPPVVVPSPPTTPSPGGSPPSPSISPSPPITVPSPPTTPSPGGSPPSPSIV 455
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +3
Query: 33 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
S +T P SP P + P+ P TP + P PS+ SP PS
Sbjct: 509 SSPTTPSPGGSPPSPSISPSPPITVPSPPSTPTSPGSPPSPSSPTPSSPIPS 560
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +3
Query: 45 TRPPCT--SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
+ PPC SP P + P PP +PA SP P P +SP P
Sbjct: 749 SHPPCIEYSPPPPPTVHYNPPPPP----SPAHYSPPPSPPVYYYNSPPP 793
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 39 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
HS PP SP P + P PPV P V+P P ++ ++PTPS
Sbjct: 793 HSPPPPVHSPPPPSPIYSPP--PPVFSPPPKPVTPLPPATSPMANAPTPS 840
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +3
Query: 39 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP---CPSTKDTHSPTP 185
HS PP SP P P P S P SP P P HSP P
Sbjct: 725 HSPPPPVQSPPPPPVFSPPPPAPIYSPPPPPVHSPPPPVHSPPPPPVHSPPP 776
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = +3
Query: 3 PTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 182
P ++R P+ S + TSP P + P PPV P SP P HSP
Sbjct: 618 PIKKRRPQPPSPSTEETKTTSPQSPPVH-SPPPPPPVHSPPPPVFSPPP-----PMHSPP 671
Query: 183 P 185
P
Sbjct: 672 P 672
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +3
Query: 54 PCTSPSKPCSRCTRPVVPPVSCWTPATV---SPTPCPSTKDTHSPTPS 188
P SP P + T PP + P T SP P PST T SP PS
Sbjct: 11 PSPSPPSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNST-SPPPS 57
Score = 31.1 bits (67), Expect = 0.77
Identities = 23/55 (41%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 21 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPT 182
P S S +ST PP PS P P PP S TP P+P P T SPT
Sbjct: 44 PPSPSTNSTSPP---PSSPLPPSLPPPSPPGSL-TPPLPQPSPSAPITPSPPSPT 94
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 42 STRPPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
S+ PP T+P S P S T PP S P ++ P P + P PS
Sbjct: 32 SSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPPLPQPS 81
>At1g18280.1 68414.m02282 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein GI:2627141 from (Picea abies); contains
Pfam profile PF00234 Protease inhibitor/seed storage/LTP
family
Length = 180
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/72 (33%), Positives = 29/72 (40%)
Frame = +2
Query: 239 LTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSET 418
LT+ + LP G S C TS T+S PP P P S T+ T S
Sbjct: 92 LTKENALDLPKACGAKADVSL--CKTSAGTNSSSTPPATPKTPPASSTSTGTGSGSTGNA 149
Query: 419 KDSVAQRLSSNP 454
S A+ SS P
Sbjct: 150 APSTAKPTSSAP 161
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTPSCVWT*PV 209
PP +P P +P PPV P T +P PCP T P P T P+
Sbjct: 130 PPPPTPYTPPPPTVKPPPPPVVTPPPPTPTPEAPCPPPPPTPYPPPPKPETCPI 183
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = +3
Query: 39 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 182
H+ +PP P P C P P P TV P P P K PT
Sbjct: 59 HTPKPPTVKPPPPYIPCPPPPYTP----KPPTVKPPPPPYVKPPPPPT 102
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 39 HSTRPPCTSPSKPCSRCTRPVVPP-VSCWTPATVSPTPCPSTKDTHSPTP 185
++ +PP P P +P PP V P V P P P+ K PTP
Sbjct: 80 YTPKPPTVKPPPP--PYVKPPPPPTVKPPPPPYVKPPPPPTVKPPPPPTP 127
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 27 SCSKH-STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
SC + S RPP +P P S + P P+ P SP P +SP P
Sbjct: 387 SCGRSVSPRPPVVTPLPPPSLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPP 440
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +3
Query: 39 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
+S+ PP SP+ CTRP PP P SP P P SP P
Sbjct: 518 YSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPP-PEPYYYSSPPP 565
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 12 RR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 182
+R P C +RPP S C R P P V+ P ++ P P+ + PT
Sbjct: 366 QRSPGQCKAFLSRPPVNCGSFSCGRSVSPRPPVVTPLPPPSLPSPPPPAPIFSTPPT 422
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +3
Query: 45 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
T PP SP P P PP ++P P P P +SP P
Sbjct: 424 TSPPPPSPPPPVYSPPPPPPPPPPVYSPP--PPPPPPPPPPVYSPPP 468
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 32.7 bits (71), Expect = 0.25
Identities = 26/61 (42%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS----TKDTHS-PTPSCVWT*P 206
S PP SP PC + P PPV + P T SP P PS T S P PS V+ P
Sbjct: 521 SPPPPPPSPPPPCPESSPP--PPVVYYAPVTQSPPP-PSPVYYPPVTQSPPPPSPVYYPP 577
Query: 207 V 209
V
Sbjct: 578 V 578
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +3
Query: 39 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 206
+S PP +S P R P PP S +P+ + P P + SP P V++ P
Sbjct: 422 YSPPPPPSSKMSPSVRAYSPPPPPYSKMSPSVRAYPPPP--PPSPSPPPPYVYSSP 475
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPP-VSCWTPATVSPTPCPSTKDTHSPTPS 188
+T+PP TSP P S T+ PP + P P P SP PS
Sbjct: 40 TTQPPATSPPSPPSPDTQTSPPPATAAQPPPNQPPNTTPPPTPPSSPPPS 89
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Frame = +3
Query: 51 PPC-----TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDT-HSPTPSC 191
PPC T + C R + P PP+SC TP PCP + HS T C
Sbjct: 626 PPCLEMIFTDLTCACGRTSIP--PPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/44 (43%), Positives = 20/44 (45%)
Frame = +3
Query: 54 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
P SP P S P PP S TP SP P P + SPTP
Sbjct: 217 PLPSPG-PDSPLPLPGPPPSSSPTPGPDSPLPSPGPPPSPSPTP 259
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 51 PPCTSPSK-PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
PP +SP+ P S P PP TP SP P P D+ P+P
Sbjct: 233 PPSSSPTPGPDSPLPSPGPPPSPSPTPGPDSPLPSPG-PDSPLPSP 277
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 42 STRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTP 149
+T PP T +P+ P + T P+VPPV+ P T++P P
Sbjct: 47 ATFPPVTITPTNPAT--TVPIVPPVTTIPPPTLTPPP 81
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/60 (36%), Positives = 24/60 (40%)
Frame = +3
Query: 6 TERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
T+RR P +S PP SP P P P S P SP P P HSP P
Sbjct: 513 TKRRSPPPAPVNSPPPPVYSPPPPPPPVHSPPPPVHSPPPPPVYSPPPPP--PPVHSPPP 570
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +3
Query: 39 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
HS PP S P + P PPV P SP P S +SP P
Sbjct: 594 HSPPPPAPVHSPPPPVHSPPPPPPVYSPPPPVFSPPPSQSPPVVYSPPP 642
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +3
Query: 39 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP--CPSTKDTHSPTP 185
HS PP SP P P PPV P SP P HSP P
Sbjct: 541 HSPPPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPP 591
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 39 HSTRPPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
H P T+P KP T PV P T P+P P+T H P+P
Sbjct: 426 HKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTT-PVHEPSP 474
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +3
Query: 21 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK-DTHSPTPS 188
P CSK ++PSKP PV P T PTP P+T SP P+
Sbjct: 404 PVDCSKDKCAGGSSTPSKP-----SPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPT 455
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +2
Query: 248 RGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDS 427
RG+ P + S SR + + L SSR W P P P SL P +R++L++ S
Sbjct: 264 RGTSPSPTVNSLSKAPSRGTSPSPTLNSSRPWKP--PEMPGFSLEAPPNLRTTLADRPVS 321
Query: 428 VAQ 436
++
Sbjct: 322 ASR 324
>At3g05690.1 68416.m00636 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 295
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 7 QREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTP 177
+ ED +V + Q+ +RR SRA A V + + R+ + H HL +R P
Sbjct: 132 ETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRP 188
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 31.9 bits (69), Expect = 0.44
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +1
Query: 61 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSR 213
RR PSR+L+ R RSY R R+ +RRR R+ R R+P R S R+R
Sbjct: 121 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRAR 167
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 31.9 bits (69), Expect = 0.44
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +1
Query: 61 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSR 213
RR PSR+L+ R RSY R R+ +RRR R+ R R+P R S R+R
Sbjct: 132 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRAR 178
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 31.9 bits (69), Expect = 0.44
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +1
Query: 61 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSR 213
RR PSR+L+ R RSY R R+ +RRR R+ R R+P R S R+R
Sbjct: 162 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRAR 208
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSPTPCPSTKDTHSPTP 185
+T PP T+ + P + P PPVS P TP P+ T P P
Sbjct: 36 TTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAP 85
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 45 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
T PP +P+ P + PV+ P TP P P++ T SP P
Sbjct: 72 TPPPAVTPTSPPAPKVAPVISPA---TPPPQPPQSPPASAPTVSPPP 115
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 54 PCTSPSKPCSRCTRPVVPP-VSCWTPATVSPTPCPS 158
P + P P S PV PP V +P ++ P P P+
Sbjct: 136 PASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPA 171
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/77 (24%), Positives = 40/77 (51%)
Frame = +2
Query: 8 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 187
+E +T ++ E + A+ V + + +++ +G TT +++ G S V + +G +LP+
Sbjct: 253 KEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTSTVVCVEDGVSLPNTE 311
Query: 188 LRLDLAGRDLTDYLMKI 238
L G D+ L+ I
Sbjct: 312 KILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/77 (24%), Positives = 40/77 (51%)
Frame = +2
Query: 8 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 187
+E +T ++ E + A+ V + + +++ +G TT +++ G S V + +G +LP+
Sbjct: 265 KEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTSTVVCVEDGVSLPNTE 323
Query: 188 LRLDLAGRDLTDYLMKI 238
L G D+ L+ I
Sbjct: 324 KILPFGGEDICRCLLWI 340
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
PP SPS P T P PP +P +P+P T P+PS
Sbjct: 118 PPDASPSPPAPTTTNP--PPKPSPSPPGETPSPPGETPSPPKPSPS 161
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 51 PPCTSPSKPC-SRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
PP SPS P + T P PP + +P + +PT PST PTP
Sbjct: 155 PPKPSPSTPTPTTTTSPPPPPATSASPPSSNPTD-PSTL-APPPTP 198
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 206
S+ PP S P + P PPV P TV+ +P P SP PS T P
Sbjct: 53 SSSPPPPVVSSPPPSSSPPPSPPVITSPPPTVASSPPPPVV-IASPPPSTPATTP 106
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
S+ PP +SP T P S P V +P PST T P P
Sbjct: 62 SSPPPSSSPPPSPPVITSPPPTVASSPPPPVVIASPPPSTPATTPPAP 109
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 36 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 161
K S PP +PS P + P P + T SP P P+T
Sbjct: 136 KPSPSPPGETPSPPGETPSPPKPSPSTPTPTTTTSPPPPPAT 177
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 30 CSKHSTRPPCTSPSKPCSRC-TRPVVPPVSCWTPATVSPTPC 152
C K S C P+ CS C +P P SCW T C
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCWKCLKCPDTEC 384
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +3
Query: 3 PTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 182
PT P + +T PP +P P + PP + PAT P+ PS D + +
Sbjct: 28 PTATPPPATPPPVATPPPVATPP-PAATPAPATPPPAATPAPATTPPSVAPSPADVPTAS 86
Query: 183 P 185
P
Sbjct: 87 P 87
>At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family member At5g52430
[Arabidopsis thaliana];
Length = 449
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 30 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 182
CS PP P + T+PV PPV ++ T P+ P T SP+
Sbjct: 115 CSLTVNEPPSAFTIGPYAHETQPVTPPV--FSAFTTEPSTAPFTPPPESPS 163
>At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identical
to gi|10880497|gb|AAG24278; supported by Ceres cDNA
265772
Length = 127
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 3 PTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 182
P+ + PR+ + + P +P+ + PV PP P++ SP P P T T
Sbjct: 34 PSPAQPPRTAAPTPSITPTPTPTPSATPTAAPVSPPAGSPLPSSASP-PAPPTSLTPDGA 92
Query: 183 P 185
P
Sbjct: 93 P 93
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 31.1 bits (67), Expect = 0.77
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 9/58 (15%)
Frame = +3
Query: 39 HSTRPPCTSPSKPC---------SRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
H T P T PS C S + P PP TP+T S TP P T +H+PTP
Sbjct: 45 HGTPPSHTPPSSNCGSPPYDPSPSTPSHPS-PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 31.1 bits (67), Expect = 0.77
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 9/58 (15%)
Frame = +3
Query: 39 HSTRPPCTSPSKPC---------SRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
H T P T PS C S + P PP TP+T S TP P T +H+PTP
Sbjct: 45 HGTPPSHTPPSSNCGSPPYDPSPSTPSHPS-PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +3
Query: 21 PRSCSKHSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKD 167
P C + PPC PS P S + PP PA P P P T D
Sbjct: 67 PPPCPPPPSPPPCPPPPSPPPSPPPPQLPPPPQLPPPAPPKPQPSPPTPD 116
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Frame = +3
Query: 21 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPATVSPTPCPSTKDTHSPTP 185
P C PPC P P C P PP S P P P P PTP
Sbjct: 58 PADCPPPPPPPPCPPPPSP-PPCPPPPSPPPSPPPPQLPPPPQLPPPAPPKPQPSPPTP 115
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +2
Query: 284 SFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPR 457
SF SR S L T+S PP P P+ S + PT+ +S+ + R S+ R
Sbjct: 21 SFSPSRISSPIKLSTASPPLPPPPPPPPNESTLSNPTLFDMMSDEHNRELPRRKSHAR 78
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 161
P SPS P P VP S TP+ SP P P T
Sbjct: 47 PKYPSPSIPSPSVPTPSVPTPSVPTPSVPSPNPTPVT 83
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 63 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 194
SP P + P +P S TP+ PTP T SP P+ V
Sbjct: 41 SPKVPSPKYPSPSIPSPSVPTPSV--PTPSVPTPSVPSPNPTPV 82
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 33 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTPS 188
S +T T S S P P S TP+T +P TP PST +PTPS
Sbjct: 258 SSGNTYKDTTGSSSGASPSGSPTPTP-STPTPSTPTPSTPTPSTPTPSTPTPS 309
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 33 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
S T P PSK SR + P P++ + AT + P S SP P+
Sbjct: 295 SSTPTSRPTLPPSKTISRSSTPTRRPIASASAATTTANPTISQIKPSSPAPA 346
>At5g08550.1 68418.m01017 expressed protein
Length = 908
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 163 RIRTPPRHPASGLSRSRPHRLPHEDPHRARLSFTTTAERE 282
++ TP P S LS S+P L P + LSF E E
Sbjct: 23 KVATPSSKPTSTLSSSKPKTLSASAPKKKLLSFADDEEEE 62
>At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family
protein
Length = 635
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +2
Query: 305 SCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAAS 484
S A++ TSS PLH ++P +F + ++++ AQ +S+PR W+ + A S
Sbjct: 126 SGASATSTSSTS-SPLHSSSPF----SFGSAPAAITSVSSGPAQSPASSPRLWIDRFATS 180
Query: 485 TRPHITPS 508
+ T S
Sbjct: 181 SSASATSS 188
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVV----PPVSCWTPATVSPTPCPST---KDTHSPTPSCVWT*PV 209
PP T+ P PV+ PP ++P T SP P P T SP PS V+ PV
Sbjct: 641 PPVTASPPPPPVYYTPVIQSPPPPPVYYSPVTQSPPPPPPVYYPPVTQSPPPSPVYYPPV 700
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +3
Query: 27 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
S S +T PP +S P R T P PP S +P+ V P P + P+P
Sbjct: 464 SPSFRATPPPPSSKMSPSFRATPP--PPSSKMSPS-VKAYPPPPPPPEYEPSP 513
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +3
Query: 39 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP--STKDTHSPTPSCVWT*PV 209
++T+ P P P PP + P T SP P P T SP P V+ PV
Sbjct: 613 YATQSPPPPPPPTYYAVQSPPPPPPVYYPPVTASPPPPPVYYTPVIQSPPPPPVYYSPV 671
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +3
Query: 21 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
P S ST PP P + V P S T + SP+ PS + SP+ S
Sbjct: 655 PSSLVSPSTSPPAGHLGSPSDTPSSVVTPSASPSTSPSASPSVSPSAFPSASPSAS 710
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 182
+ +PP TSP KP P PPV +P PT P T PT
Sbjct: 130 TVKPPTTSPVKP------PTTPPVQ--SPPVQPPTYKPPTSPVKPPT 168
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 48 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 200
+PP T+P T PV PP + P T +P P+ PTP V T
Sbjct: 165 KPPTTTPPVKPPTTTPPVQPPT--YNPPT-TPVKPPTAPPVKPPTPPPVRT 212
>At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 182
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 30 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTKDTHSPTPS 188
C+ P +P P + P VP TP+ SP+ P PS P+P+
Sbjct: 30 CNPSPKPRPLPNPKVPSPKVPTPSVPSPYVPTPSVPSPSVPTPSVPSPSVPSPN 83
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 27 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
SC + P T+ + P + +PPV+ TP+ ++ P P + T +PT S
Sbjct: 18 SCLAQAPAPAPTTVTPPPT-----ALPPVTAETPSPIASPPVPVNEPTPAPTTS 66
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
S PP +SPS P PP +P++ P P PS+ S +PS
Sbjct: 37 SPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPP-PSSSPLSSLSPS 84
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3
Query: 42 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
S PP +SPS P PP +P++ P P PS+ S +PS
Sbjct: 86 SPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPP-PSSSPLSSLSPS 133
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/55 (34%), Positives = 22/55 (40%)
Frame = +3
Query: 21 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
P S S S P SPS P P PP P S +P S + SP+P
Sbjct: 40 PPSSSPSSAPPSSLSPSSPPPLSLSPSSPP-----PPPPSSSPLSSLSPSLSPSP 89
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/56 (33%), Positives = 23/56 (41%)
Frame = +3
Query: 39 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 206
+S PP SP P + P P V P SP P HSP P V++ P
Sbjct: 550 YSPPPPVHSPPPPVY--SSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPP 603
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +3
Query: 39 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
HS PP SP P PP+ TP T +PTP S++ T PTPS
Sbjct: 623 HSPPPPVYSPPPPTFSPPPTHNTNQPPMGAPTP-TQAPTP--SSETTQVPTPS 672
>At1g11130.1 68414.m01274 leucine-rich repeat family protein /
protein kinase family protein contains leucine
rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leucine-rich
repeat transmembrane protein kinase 2 [Zea mays]
gi|3360291|gb|AAC27895
Length = 768
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTR-PVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 206
PP P R P +PPVS PA +P + P+P VW+ P
Sbjct: 252 PPVVDPPPATHRAPPVPRIPPVSGVPPAPFAPFAPLQPQQHPPPSPPLVWSPP 304
>At4g00060.1 68417.m00006 nucleotidyltransferase family protein
contains Pfam profile: PF01909 nucleotidyltransferase
domain
Length = 839
Score = 29.1 bits (62), Expect = 3.1
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 164 GYALPHAILR-LDLAGRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSR- 337
G +LP+ ILR + + ++Y T+ + PP+ + +R + +L R
Sbjct: 294 GDSLPYPILRPIIIPNMSKSEYKRSYDTKSPN---VPPTRREHPRIKRPPSPVVLCVPRA 350
Query: 338 -KWPPLHPAAPSRSLTNFPTVRSSLSETK 421
+ PP P + SR+ FPTVRS S +
Sbjct: 351 PRPPPPSPVSNSRARRGFPTVRSGSSSPR 379
>At1g15280.2 68414.m01829 glycine-rich protein
Length = 585
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 230 MKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSL 409
M L R S + P + ++++ A S L+S+ PP +P+APS ++ + V
Sbjct: 249 MPHLDSRRSPTAPAKTENQGAHAKKNVAVSSLSSAS--PPFYPSAPSSNVVHGIQVSMER 306
Query: 410 SETKDSV 430
T +SV
Sbjct: 307 LHTNESV 313
>At1g15280.1 68414.m01828 glycine-rich protein
Length = 584
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 230 MKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSL 409
M L R S + P + ++++ A S L+S+ PP +P+APS ++ + V
Sbjct: 248 MPHLDSRRSPTAPAKTENQGAHAKKNVAVSSLSSAS--PPFYPSAPSSNVVHGIQVSMER 305
Query: 410 SETKDSV 430
T +SV
Sbjct: 306 LHTNESV 312
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = +3
Query: 36 KHSTRPPCTSPS-KPCSRCTRPVVPPVSCWTPATVSPTPC---PSTKDTHSPTP 185
K +P T P KP T P P TP P P P+ K T +PTP
Sbjct: 52 KPKPKPAPTPPKPKPAPAPTPPKPKPAPAPTPPKPKPKPAPTPPNPKPTPAPTP 105
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 54 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
P +P+ P + T PP PA +PTP P K P P
Sbjct: 88 PKPAPTPPNPKPTPAPTPPKPKPAPAP-APTPAPKPKPAPKPAP 130
>At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 175
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = +3
Query: 21 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 200
P ++S PP + S P SRC P VP C P P PST +SP +T
Sbjct: 66 PPPSPQYSPPPPPSQSSPPRSRC--PPVPTTGC---CNQPPGPPPST--MYSPPYPYFYT 118
Query: 201 *P 206
P
Sbjct: 119 PP 120
>At4g24175.1 68417.m03469 expressed protein
Length = 306
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +3
Query: 360 QLPREVLRTSRRSGHHYRK------RKIPLPRGSLPTLVL 461
QL R + + S + HH+R +K+P P S+PTL+L
Sbjct: 3 QLIRPIRQLSPQCNHHFRNLRYLFSKKLPNPPSSIPTLLL 42
>At4g02430.2 68417.m00330 pre-mRNA splicing factor, putative / SR1
protein, putative strong similarity to SP|O22315
Pre-mRNA splicing factor SF2 (SR1 protein) {Arabidopsis
thaliana}; cDNA NCBI_gi:15810292 supports a truncated
version while protein evidence supports a longer model.
Length = 278
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 242 TERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAP-SRSLTNFPTVRSSLSET 418
+ R SRS P G+S+ SR + + SR +P ++SL P +S S
Sbjct: 195 SRRDSRS--PSRGRSYSKSRSRGRSPSRSRSRSRSRSKSRSPKAKSLRRSPAKSTSRSPR 252
Query: 419 KDSVAQRLSSNPRSWV 466
S ++ S +PR WV
Sbjct: 253 SRSRSKSRSLSPRGWV 268
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +3
Query: 36 KHSTRPPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
KH PP T P KP P PP T P P P + +P P
Sbjct: 488 KHFAPPPPTPPAFKPLKGSAPPPPPPPPLPTTIAAPPPPPPPPRAAVAPPP 538
>At5g61090.1 68418.m07665 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420;
common family members: At4g18570, At3g25690, At4g04980
[Arabidopsis thaliana]
Length = 344
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 45 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
TRP T+PS + T V PVS P +V+P+P + + + P
Sbjct: 157 TRPTSTAPSPVSAHPTSVVPSPVSV-HPTSVAPSPVSACLTSEASKP 202
>At4g01985.1 68417.m00265 expressed protein
Length = 579
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -2
Query: 184 GVGECVSFVDGHGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHGG 50
GVG V G VG V G +GG +G G G V GG
Sbjct: 507 GVGGGVRGAVGGAVGGGVGGAGRGSGGASGGAGAGGGAGGGVGGG 551
>At4g00890.1 68417.m00120 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 431
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +3
Query: 21 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
P++ H ++ P PS + P+ +PAT++ P P + TPS
Sbjct: 272 PKASENHQSKSPMPPPSPTAQISLSSLKSPIP--SPATITAPPPPFSSPLSQTTPS 325
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 63 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
SPS P S + P P TP+T S P P + + S PS
Sbjct: 124 SPSTPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPS 165
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +3
Query: 12 RR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
+R R CS +RP S C R PP+ P P+P P +SP PS
Sbjct: 374 QRSSRQCSAFLSRPSVDCGSFGCGRSVVKPSPPIVA-LPPPPPPSP-PLPPPVYSPPPS 430
>At3g20560.1 68416.m02603 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 483
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 552 VLSGGTTCTLESPTVCKRNH 611
VL G CT E P +CKRNH
Sbjct: 199 VLLGNVDCT-EEPALCKRNH 217
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = +3
Query: 39 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
HS PP SP P + P PPV P SP P HSP P
Sbjct: 600 HSPPPPVHSPPPPVY--SPPPPPPVHSPPPPVFSPPP-----PVHSPPP 641
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 96 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
P PP SC TP+ P+P P K + P+P
Sbjct: 53 PSPPPPSC-TPSPPPPSPPPPKKSSCPPSP 81
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 21 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP--TPS 188
P+S S S P SPS S P +P + SP+ P+ +HSP TPS
Sbjct: 182 PKSSSPIS-HTPALSPSHATSHSPATPSPSPKSPSPVSHSPSHSPAHTPSHSPAHTPS 238
>At5g29020.1 68418.m03592 hypothetical protein
Length = 847
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 60 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT-PSCV 194
++P+KPC T PV PP + P PS + +PT PS V
Sbjct: 26 SNPAKPCGSRTLPVNPPYPTTGKRKRADPPKPSRGLSPNPTDPSGV 71
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 155
PP + P P + P+ PP S P +SP P P
Sbjct: 1087 PPSSLPPPPPAALFPPLPPPPSQPPPPPLSPPPSP 1121
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 21 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPA 131
P + S P + P +RP +P V+CW PA
Sbjct: 1356 PSAASNLQAVPAIPGHTAPQMLPSRPDIPTVNCWRPA 1392
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Frame = +3
Query: 63 SPSKPCSRCTRPVVPPVSCWTPATVSP----TPCPSTKDTHSPT 182
+PS P + PV PP TP+ SP P P D + T
Sbjct: 89 NPSPPAPEGSTPVTPPAPPQTPSNQSPERPTPPSPGANDDRNRT 132
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRP---VVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
PP T+P P + P + PP+S PA P P +T P P
Sbjct: 99 PPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKP 146
>At4g19110.1 68417.m02819 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 461
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 317 SLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSVA 433
S + S+ PP + P+ SL RSS+SET D +A
Sbjct: 366 SSVRDSKYRPPGKKSPPAASLNKNRVTRSSVSETADKLA 404
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVS------CWTPATVSPT-PCPSTKDTHSPTPSCVW 197
PP SPS P RP PP+S WT T S P P P PS W
Sbjct: 68 PP--SPSPPPPPPPRPPPPPLSPGSETTTWTTTTTSSVLPPPPPPPPPPPPPSSTW 121
>At2g33780.1 68415.m04143 VQ motif-containing protein contains
PF05678: VQ motif
Length = 204
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 338 KWPPLHPAAPSRSLTNFPTVRS-SLSETKDSVAQRLSSNP 454
++PP H P +++TN S LSE ++S+ L+ NP
Sbjct: 67 RFPPFHSIPPIKAVTNKKQSSSFRLSERRNSMKHYLNINP 106
>At2g23990.2 68415.m02866 plastocyanin-like domain-containing
protein
Length = 226
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = +3
Query: 72 KPCSRCTRPVVPPVSCWTPAT---VSPTPCP-STKDTHSPTPS 188
KP P +PP TPA PTP P S+ T +P P+
Sbjct: 154 KPGPAAVTPTLPPKPSTTPAAPAPAPPTPSPKSSTSTMAPAPA 196
>At2g23990.1 68415.m02865 plastocyanin-like domain-containing
protein
Length = 207
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = +3
Query: 72 KPCSRCTRPVVPPVSCWTPAT---VSPTPCP-STKDTHSPTPS 188
KP P +PP TPA PTP P S+ T +P P+
Sbjct: 135 KPGPAAVTPTLPPKPSTTPAAPAPAPPTPSPKSSTSTMAPAPA 177
>At2g22510.1 68415.m02670 hydroxyproline-rich glycoprotein family
protein similar to proline-rich cell wall protein
[Gossypium barbadense] gi|451544|gb|AAA79364; contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 124
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
PP T+ P T P PP + T P P PS++ P P+
Sbjct: 36 PPVTTTFPPLPTTTMPPFPPSTSLPQPTAFP-PLPSSQIPSLPNPA 80
>At2g18840.1 68415.m02194 integral membrane Yip1 family protein
contains Pfam domain, PF04893: Yip1 domain
Length = 281
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 266 PPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFP 391
P P+ S S S ++ + S+ PPLHP++ ++ +T+ P
Sbjct: 41 PSPTRPSIPVSSSSSSSPFMQSNL--PPLHPSSSAQKVTHVP 80
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 33 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 179
+K S PP P+ T+P +PP + SP P + K T++P
Sbjct: 153 NKPSLSPPVYKPTLSPPVYTKPTLPPPVYKKSPSYSPPPPFAPKPTYTP 201
>At1g50950.1 68414.m05728 thioredoxin-related contains weak hit to
Pfam PF00085: Thioredoxin; contains 2 predicted
transmembrane domains
Length = 484
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 552 VLSGGTTCTLESPTVCKRNH 611
VL G CT E PT+CK NH
Sbjct: 200 VLLGSVDCT-EEPTLCKSNH 218
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 106 HRYRAGLRRRCL-PHRAHLRRIRTPPRHPASG 198
+ ++AG R R L P + L +R PPR PA+G
Sbjct: 601 YTFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
>At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 162
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Frame = +3
Query: 30 CSKHSTRPPCTSP---SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
CS + PP SP S P + C P PP S + P P S + P P
Sbjct: 43 CSPVQSSPPPPSPPPPSTPTTACPPPPSPPSSGGGSSYYYPPPSQSGGGSKYPPP 97
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Frame = +3
Query: 39 HSTRPPCTSPSKPCSRCTRPVV-----PPVSCWTPATVSPTPCPSTKDTHSPTP 185
+S P SP PC +P PP + P SP P PS + P P
Sbjct: 382 YSPPPYAYSPPPPCPDVYKPPPYVYSSPPPYVYNPPPSSPPPSPSYSYSSPPPP 435
>At3g56590.1 68416.m06293 hydroxyproline-rich glycoprotein family
protein
Length = 477
Score = 27.5 bits (58), Expect = 9.5
Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +3
Query: 3 PTERR*PRSC-SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 179
PT+ P S +KHS PP P R RP S T PTP P H P
Sbjct: 356 PTKGFAPASAPTKHSPLPPRNPPCPYEQR--RP--KGNSALNHHTAPPTPAPHRSQPHPP 411
Query: 180 TPS 188
P+
Sbjct: 412 APN 414
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +3
Query: 54 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP---CPSTKDTHSPTPS 188
P SPS P + P P S TP+ PTP P HS +PS
Sbjct: 122 PKKSPSPPPTPSLPPPAPKKSPSTPSLPPPTPKKSPPPPPSHHSSSPS 169
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCW-TPATVSPTPCPSTKDTHSPTP 185
P +P++P P PV+ T T P P P+T + +P P
Sbjct: 117 PVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAP 162
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCW-TPATVSPTPCPSTKDTHSPTP 185
P +P++P P PV+ T T P P P+T + +P P
Sbjct: 117 PVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAP 162
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 710 GREGGEDRSTDPYGVLPLWRSNDLNLHCRWARA 612
G E GEDR DP + + R NDL + + A
Sbjct: 47 GMEEGEDRPIDPISDIDITRINDLMFNSNFRAA 79
>At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 485
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
PP PS P + PV+PP+ + P + D H PS
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPS 63
>At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 514
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
PP PS P + PV+PP+ + P + D H PS
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPS 63
>At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 483
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +3
Query: 51 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
PP PS P + PV+PP+ + P + D H PS
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPS 63
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 680 DPYGVLPLWRSNDLNLHCRW 621
DP GVL W S+ + HC W
Sbjct: 45 DPNGVLSSWVSDSSSNHCSW 64
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,287,616
Number of Sequences: 28952
Number of extensions: 440272
Number of successful extensions: 2350
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 1796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2228
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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