Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00001
(615 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55653| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 2e-26
SB_34970| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_7724| Best HMM Match : ATP-synt_ab_C (HMM E-Value=0) 36 0.026
SB_54174| Best HMM Match : EGF (HMM E-Value=0.21) 32 0.42
SB_48206| Best HMM Match : LTXXQ (HMM E-Value=3) 30 1.3
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16) 30 1.7
SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 30 1.7
SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_13658| Best HMM Match : MbeD_MobD (HMM E-Value=2.3) 29 3.0
SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3) 29 3.0
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 3.0
SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_20721| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_36343| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_12036| Best HMM Match : G_glu_transpept (HMM E-Value=0) 28 5.2
SB_54815| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 27 9.1
SB_23580| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_34234| Best HMM Match : Galactosyl_T (HMM E-Value=0.0098) 27 9.1
SB_24292| Best HMM Match : LTXXQ (HMM E-Value=1.7) 27 9.1
>SB_55653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 116 bits (278), Expect = 2e-26
Identities = 59/75 (78%), Positives = 66/75 (88%), Gaps = 1/75 (1%)
Frame = +2
Query: 356 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGN-L*WQGTIDT 532
LNLEPDNVGVVVFGND+LIKEGDIVKRTGAIVDVPVGE++LGRVVDALGN + +G
Sbjct: 3 LNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNPIDGKGPTG- 61
Query: 533 KSRMRVGIKAPGIIP 577
+R RVG+KAPGIIP
Sbjct: 62 GTRARVGVKAPGIIP 76
>SB_34970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -1
Query: 327 PPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSRMV 196
PPSP G +S+H+ S T+ N+ ++ S S L AP +S+ +V
Sbjct: 197 PPSPTHGVASTHSASPTVPNSSPLSLFSTSPLTDAPHHVSNPLV 240
>SB_7724| Best HMM Match : ATP-synt_ab_C (HMM E-Value=0)
Length = 448
Score = 35.9 bits (79), Expect = 0.026
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 383 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGN-L*WQGTIDTKSRMRVGIK 559
+ + G + LI+ G TG + +PVG + LGR+++ +G + +G ++T R + +
Sbjct: 124 IAMDGTEGLIR-GQKCVDTGGPITIPVGPETLGRIINVIGEPIDERGPVETDKRAAIHAE 182
Query: 560 APGII 574
AP +
Sbjct: 183 APEFV 187
>SB_54174| Best HMM Match : EGF (HMM E-Value=0.21)
Length = 658
Score = 31.9 bits (69), Expect = 0.42
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 551 RPSYGISCRLSLAIIGFPKRLLHAQGSALR 462
R YG CR S IG P R H QG AL+
Sbjct: 87 RSVYGDYCRTSSPFIGLPPRSPHGQGDALK 116
>SB_48206| Best HMM Match : LTXXQ (HMM E-Value=3)
Length = 513
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
RRTPPS P S S SDT + +V R A A R+ S +
Sbjct: 261 RRTPPSFTPRSSISRRRSDTPKKRRRISVPRRRAGSAQGRLTSKK 305
>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
RRTPPS P S S SDT + +V R A A RI + +
Sbjct: 521 RRTPPSFTPRSSISRRRSDTPKKRRRISVPRRRAGSAQGRITTKK 565
>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = -3
Query: 457 NVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKAIPLRPEENSTISSAW 308
++ S +L+N+ F K+ + + +I R+Q++ + RP+ + S AW
Sbjct: 38 HIESSKPSLENLDFEGKVRKLQEHFKNIPRYQIRKVLGRPDVRNNASLAW 87
>SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
R TPPS P S S SDT N + +V R A A R+ +++
Sbjct: 115 RHTPPSFTPRSSISRRRSDTPKNRRRISVPRRRAGSALGRLTTNK 159
>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1659
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -3
Query: 475 DLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRF 365
D LSDG+ ++T N F D+++ + HT+I RF
Sbjct: 1175 DALSDGS---KSNTSGNYGFMDQIMALSWIHTNIARF 1208
>SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16)
Length = 298
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 330 TPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSRM 199
TPPSP P + S T + D+ + S S+ G++ + S M
Sbjct: 4 TPPSPSPSSTGSSLTDTESNESNDSGIDSVSSTGSSNKFPSDYM 47
>SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 493
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
RRTPPS P S S SDT + +V R A A RI + +
Sbjct: 233 RRTPPSFTPRSSISRRRSDTPKKRRRISVPRRRAGSAQGRITTKK 277
>SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
RRTPPS P S S SDT + +V R A A R+ + +
Sbjct: 90 RRTPPSFTPRSSISRRRSDTPKKRRRISVPRRRAGSAQGRLTTKK 134
>SB_13658| Best HMM Match : MbeD_MobD (HMM E-Value=2.3)
Length = 529
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
RRTPPS P S S SDT + +V R A A R+ + +
Sbjct: 341 RRTPPSFTPRSSISRRRSDTPKKRRRISVPRRRAGSALGRLTTKK 385
>SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3)
Length = 660
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
RRTPPS P S S SDT + +V R A A R+ + +
Sbjct: 472 RRTPPSFTPRSSISRRRSDTPIKQRRISVPRRRAGSALGRLTTKK 516
>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1507
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 132 PQWPWHLENYMSQPPTKLPRSPPS-SKRGSLEPRP 233
PQ P H E PTK P+SP + S SL P P
Sbjct: 117 PQSPLHPEKSPLLSPTKAPKSPSTQSTLASLAPNP 151
>SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1207
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 327 PPSPQPGCSSSHNTSDTITNAQDTTVSSRS 238
PP+P ++S NTS TI++ T SSR+
Sbjct: 849 PPAPTSSLATSGNTSTTISDNTATPTSSRT 878
>SB_20721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 28.7 bits (61), Expect = 4.0
Identities = 23/55 (41%), Positives = 25/55 (45%)
Frame = -1
Query: 348 P*GLRRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSRMVEISA 184
P LRRTPPS P S S SDT T + RS R+L SR SA
Sbjct: 120 PGQLRRTPPSFTPRLSISRRRSDTPTKRRRMHREYRS----GERVLLSRRRPTSA 170
>SB_36343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 189 RSPPSSKRGSLEPRPRLI*KRLSCLEHW*WYR 284
++PP+S ++P P LI + C E+W YR
Sbjct: 4 KNPPTSPPVEVKPTPILIDDNVKCPEYWINYR 35
>SB_12036| Best HMM Match : G_glu_transpept (HMM E-Value=0)
Length = 646
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 350 NGLNLEPDN-VGVVVFGNDKLIKEGDIVKR 436
N LN+ N +G + N K++ EGDIVKR
Sbjct: 247 NALNITNSNSLGEIFTRNGKMLVEGDIVKR 276
>SB_54815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -3
Query: 565 WRLNTDPHTG-FRVDCPLPS*VSQSVYYTPK 476
W+L DP T FR D LP+ V+Q V+Y+PK
Sbjct: 204 WKLLRDPITPVFRSD--LPTLVTQLVHYSPK 232
>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
RRTP S P S S SDT + +VS R A A R+ + +
Sbjct: 115 RRTPSSFTPRSSISRRRSDTPKKRRRISVSRRRAGSALGRLTTKK 159
>SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 183 LPRSPPSSKRGSLEPRPRLI*KRLSCLEHW*WYRSCYGLKNIQAEEMVEFSSGLKGMALT 362
LPRSP S P+L KR+ L+ ++ S +G VE + L+ + +
Sbjct: 308 LPRSPKGSPVSKGGNSPKLNRKRMKVLQEAMYHSSEHG--------FVEIAMELRSLGVP 359
Query: 363 WNLTMW 380
W+L W
Sbjct: 360 WSLHCW 365
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 342 GLRRTPPSPQPGCS 301
GL PPSPQPGC+
Sbjct: 724 GLPPPPPSPQPGCA 737
>SB_23580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 342 GLRRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSS 205
G RR +P ++ +S A D T+S RSA PR LSS
Sbjct: 11 GRRRVVDDSKPLFQTAVESSTVPKTATDVTLSPRSARDMRPRPLSS 56
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = -1
Query: 366 SKLRPFP*GLRRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAP 220
+K +P P G + P P S HN + D S+S+ P
Sbjct: 100 NKNKPQPSGFSQEQSRPSPFASQEHNQTSPFARTMDDNAPSKSSPFVGP 148
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 342 GLRRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSS 205
G RR +P ++ +S A D T+S RSA PR LSS
Sbjct: 2383 GRRRVVDDSKPLFQTAVESSTVPKTATDVTLSPRSARDMRPRPLSS 2428
>SB_34234| Best HMM Match : Galactosyl_T (HMM E-Value=0.0098)
Length = 1028
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 380 GVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDAL 499
G+++FG D + +IVKR + P G+Q +G ++AL
Sbjct: 207 GLIIFGRDFV---DEIVKRNQTLQCHPFGDQAIGLWINAL 243
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 380 GVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDAL 499
G+++FG D + +IVKR + P G+Q +G ++AL
Sbjct: 488 GLIIFGRDFV---DEIVKRNQTLQCHPFGDQAIGLWINAL 524
>SB_24292| Best HMM Match : LTXXQ (HMM E-Value=1.7)
Length = 288
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 339 LRRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
L+RTPPS P S S SDT + +V R A G+A ++++
Sbjct: 121 LQRTPPSFTPRSSISRRRSDTPKGRRRISVPRRRA-GSAQGCITNK 165
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,751,083
Number of Sequences: 59808
Number of extensions: 421132
Number of successful extensions: 1335
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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