Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00001
         (615 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.      25   1.9  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            25   2.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   4.5  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   4.5  

>AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.
          Length = 110

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 400 ITKYYHTHIVRFQVKAIP 347
           + KY HTH+++    AIP
Sbjct: 56  LPKYEHTHVMQLSTSAIP 73


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
 Frame = +3

Query: 279 YRSCYGLK---NIQAEEMVEFSSGLKGMALTWNLTMWVW*YLVM 401
           YR  Y  K   ++  ++M+ F+   K      N T W W Y  +
Sbjct: 491 YRKAYRDKLSFSVSNDQMISFAQFCKDTTPECNYTFWEWLYAAL 534


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/14 (71%), Positives = 12/14 (85%), Gaps = 1/14 (7%)
 Frame = +3

Query: 168 QPPTKLPR-SPPSS 206
           QPP K+PR +PPSS
Sbjct: 319 QPPEKMPRLNPPSS 332


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = +3

Query: 120 RWRYPQWPWHLENYMSQPPTKLPRSPPSSKRGSLEPRPR 236
           RW   + P       S  PT  PRS P+SK   L  R R
Sbjct: 267 RWPSCRSPPARRRSRSTRPTSWPRSRPTSKPKRLPRRRR 305


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,929
Number of Sequences: 2352
Number of extensions: 13088
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)