Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_L13
(577 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 275 8e-74
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 275 8e-74
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 275 8e-74
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 275 8e-74
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 228 9e-60
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 118 1e-26
CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein. 31 3.8
BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying pro... 31 3.8
AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein. 31 3.8
AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens ... 31 3.8
BC037399-1|AAH37399.1| 446|Homo sapiens KIAA0415 protein protein. 29 8.9
BC008841-1|AAH08841.2| 391|Homo sapiens KIAA0415 protein protein. 29 8.9
AB007875-1|BAA24845.1| 634|Homo sapiens KIAA0415 protein. 29 8.9
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 275 bits (674), Expect = 8e-74
Identities = 125/162 (77%), Positives = 142/162 (87%)
Frame = +1
Query: 91 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 270
R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+
Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDS 106
Query: 271 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 450
TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF
Sbjct: 107 TPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 166
Query: 451 HTGRLLACVASRPGQCGRADGYILEGKELEFHLRKIKSKRAK 576
G+LLAC+ASRPGQCGRADGY+LEGKELEF+LRKIK+++ K
Sbjct: 167 QQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
Score = 48.0 bits (109), Expect = 2e-05
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +3
Query: 3 RAPIRKQXKYELGRPAANTRLGPQRIHS 86
R P K+ KYELGRPAANT++GP+RIH+
Sbjct: 18 RKPYHKKRKYELGRPAANTKIGPRRIHT 45
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 275 bits (674), Expect = 8e-74
Identities = 125/162 (77%), Positives = 142/162 (87%)
Frame = +1
Query: 91 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 270
R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+
Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDS 106
Query: 271 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 450
TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF
Sbjct: 107 TPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 166
Query: 451 HTGRLLACVASRPGQCGRADGYILEGKELEFHLRKIKSKRAK 576
G+LLAC+ASRPGQCGRADGY+LEGKELEF+LRKIK+++ K
Sbjct: 167 QQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
Score = 48.0 bits (109), Expect = 2e-05
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +3
Query: 3 RAPIRKQXKYELGRPAANTRLGPQRIHS 86
R P K+ KYELGRPAANT++GP+RIH+
Sbjct: 18 RKPYHKKRKYELGRPAANTKIGPRRIHT 45
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 275 bits (674), Expect = 8e-74
Identities = 125/162 (77%), Positives = 142/162 (87%)
Frame = +1
Query: 91 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 270
R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+
Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDS 106
Query: 271 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 450
TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF
Sbjct: 107 TPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 166
Query: 451 HTGRLLACVASRPGQCGRADGYILEGKELEFHLRKIKSKRAK 576
G+LLAC+ASRPGQCGRADGY+LEGKELEF+LRKIK+++ K
Sbjct: 167 QQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
Score = 48.0 bits (109), Expect = 2e-05
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +3
Query: 3 RAPIRKQXKYELGRPAANTRLGPQRIHS 86
R P K+ KYELGRPAANT++GP+RIH+
Sbjct: 18 RKPYHKKRKYELGRPAANTKIGPRRIHT 45
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 275 bits (674), Expect = 8e-74
Identities = 125/162 (77%), Positives = 142/162 (87%)
Frame = +1
Query: 91 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 270
R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+
Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDS 106
Query: 271 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 450
TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF
Sbjct: 107 TPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 166
Query: 451 HTGRLLACVASRPGQCGRADGYILEGKELEFHLRKIKSKRAK 576
G+LLAC+ASRPGQCGRADGY+LEGKELEF+LRKIK+++ K
Sbjct: 167 QQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
Score = 48.0 bits (109), Expect = 2e-05
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +3
Query: 3 RAPIRKQXKYELGRPAANTRLGPQRIHS 86
R P K+ KYELGRPAANT++GP+RIH+
Sbjct: 18 RKPYHKKRKYELGRPAANTKIGPRRIHT 45
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 228 bits (558), Expect = 9e-60
Identities = 110/157 (70%), Positives = 128/157 (81%)
Frame = +1
Query: 106 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 285
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 91
Query: 286 WYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRL 465
WYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF G+L
Sbjct: 92 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKL 151
Query: 466 LACVASRPGQCGRADGYILEGKELEFHLRKIKSKRAK 576
LAC+ASRPGQCGRADGY+LEGKELEF+LRKIK+++ K
Sbjct: 152 LACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
Score = 48.0 bits (109), Expect = 2e-05
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +3
Query: 3 RAPIRKQXKYELGRPAANTRLGPQRIHS 86
R P K+ KYELGRPAANT++GP+RIH+
Sbjct: 18 RKPYHKKRKYELGRPAANTKIGPRRIHT 45
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 118 bits (284), Expect = 1e-26
Identities = 53/80 (66%), Positives = 66/80 (82%)
Frame = +1
Query: 337 LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGY 516
LT EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCGRADGY
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGY 60
Query: 517 ILEGKELEFHLRKIKSKRAK 576
+LEGKELEF+LRKIK+++ K
Sbjct: 61 VLEGKELEFYLRKIKARKGK 80
>CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein.
Length = 201
Score = 30.7 bits (66), Expect = 3.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 316 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 462
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying
protein 6 protein.
Length = 201
Score = 30.7 bits (66), Expect = 3.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 316 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 462
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein.
Length = 201
Score = 30.7 bits (66), Expect = 3.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 316 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 462
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ11749 fis, clone HEMBA1005558, weakly similar to
NUCLEAR PROTEIN SNF7. ).
Length = 201
Score = 30.7 bits (66), Expect = 3.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 316 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 462
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>BC037399-1|AAH37399.1| 446|Homo sapiens KIAA0415 protein protein.
Length = 446
Score = 29.5 bits (63), Expect = 8.9
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3
Query: 485 RLATQASKRPVWNCSSRAPSTL 420
R A AS+RP+W+ S RAPS L
Sbjct: 329 RSAPAASERPLWDTSLRAPSCL 350
>BC008841-1|AAH08841.2| 391|Homo sapiens KIAA0415 protein protein.
Length = 391
Score = 29.5 bits (63), Expect = 8.9
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3
Query: 485 RLATQASKRPVWNCSSRAPSTL 420
R A AS+RP+W+ S RAPS L
Sbjct: 69 RSAPAASERPLWDTSLRAPSCL 90
>AB007875-1|BAA24845.1| 634|Homo sapiens KIAA0415 protein.
Length = 634
Score = 29.5 bits (63), Expect = 8.9
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3
Query: 485 RLATQASKRPVWNCSSRAPSTL 420
R A AS+RP+W+ S RAPS L
Sbjct: 506 RSAPAASERPLWDTSLRAPSCL 527
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,928,816
Number of Sequences: 237096
Number of extensions: 1679272
Number of successful extensions: 3960
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3960
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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