Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_L02
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58757-2|AAC47915.2|  402|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U39676-1|AAB37030.1|  186|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AL110485-20|CAB60368.2|  600|Caenorhabditis elegans Hypothetical...    29   3.8  
Z93383-6|CAB07623.1|  283|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U13072-3|AAK31396.4|  326|Caenorhabditis elegans Serpentine rece...    27   8.7  

>U58757-2|AAC47915.2|  402|Caenorhabditis elegans Hypothetical
           protein C01B10.3 protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 338 SSAVMCQCLAVTERFYTIFRGAESFCSTKLESFSSLELYK 219
           ++ V+C C+      Y  F  + +F  TKL    +L L+K
Sbjct: 59  AARVICGCITDNPEIYRAFDSSMAFFDTKLTGLGNLYLFK 98


>U39676-1|AAB37030.1|  186|Caenorhabditis elegans Hypothetical
           protein C23F12.4 protein.
          Length = 186

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 136 CESNTRKVNEPRVQSTTPHVALRESD*GLYNSNDENDSSFVLQKL 270
           CE +     +PR +S T  V LR+    L  ++D+N+ +FVL+ L
Sbjct: 33  CEQHG-STEDPRKESITARVFLRKRMKELPETDDKNNKAFVLRAL 76


>AL110485-20|CAB60368.2|  600|Caenorhabditis elegans Hypothetical
           protein Y46G5A.25 protein.
          Length = 600

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = -2

Query: 191 CGVVLCT-RGSFTFLVFDSQNLALAFYVTAVRGCVFYFTEIYIRWHRSSLAQIPGR 27
           CGV+L T  G + F +FD         ++A   C+       +R  R+ +A + GR
Sbjct: 409 CGVILTTDAGIYWFALFDEYGSGFGALISATSMCIIISYIYGMRNFRADIASMLGR 464


>Z93383-6|CAB07623.1|  283|Caenorhabditis elegans Hypothetical
           protein F54B8.6 protein.
          Length = 283

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 161 FTFLVFDSQNLALAFYVTAVRGCVFYFTEIY 69
           + FLVFD+    L F +T  R    YF   Y
Sbjct: 86  YPFLVFDTMRYTLGFLITFDRFIAIYFPVFY 116


>U13072-3|AAK31396.4|  326|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 3 protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -2

Query: 185 VVLCTRGSFTFLVFDSQNLALAFYVTAVRGCVFYF 81
           V L  R    FL+F+S    L FY  ++  C  YF
Sbjct: 69  VQLTARSIQIFLIFNSAEDGLVFYYASLARCTCYF 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,666,973
Number of Sequences: 27780
Number of extensions: 219033
Number of successful extensions: 513
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)