Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_K19
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 69 4e-12
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 67 9e-12
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 62 3e-10
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 60 1e-09
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 60 2e-09
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 58 7e-09
Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical pr... 57 9e-09
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical p... 54 7e-08
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 53 2e-07
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 50 1e-06
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 50 2e-06
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 49 3e-06
U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain (pr... 47 1e-05
Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical p... 46 3e-05
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 45 5e-05
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 45 5e-05
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 44 9e-05
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 42 4e-04
AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical ... 42 4e-04
AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain (... 42 5e-04
Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical pr... 35 0.058
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 33 0.13
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 33 0.13
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 31 0.71
Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical pr... 31 0.94
AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein. 31 0.94
Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light c... 30 1.2
U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light ... 30 1.2
U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light ... 30 1.2
U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light ... 30 1.2
U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light ... 30 1.2
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light c... 30 1.6
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 30 1.6
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 29 2.2
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 29 2.2
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 29 2.2
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 29 2.2
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 29 2.2
Z92831-6|CAB07365.2| 355|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z92777-12|CAJ58496.1| 355|Caenorhabditis elegans Hypothetical p... 29 2.9
AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical ... 29 2.9
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 29 3.8
Z75531-7|CAA99798.2| 316|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 28 6.6
AC024819-1|AAF59589.1| 223|Caenorhabditis elegans Hypothetical ... 28 6.6
Z73969-20|CAA98241.1| 643|Caenorhabditis elegans Hypothetical p... 27 8.7
U80024-9|AAK18886.1| 300|Caenorhabditis elegans Serpentine rece... 27 8.7
U70854-12|AAB09150.1| 263|Caenorhabditis elegans Hypothetical p... 27 8.7
U61948-7|AAB03148.1| 195|Caenorhabditis elegans Hypothetical pr... 27 8.7
U21487-1|AAA96949.1| 643|Caenorhabditis elegans ribonucleoprote... 27 8.7
L41729-1|AAC41575.1| 643|Caenorhabditis elegans Ro ribonucleopr... 27 8.7
AL021479-8|CAA16325.1| 643|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical
protein R74.4 protein.
Length = 378
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/67 (46%), Positives = 46/67 (68%)
Frame = +1
Query: 73 IEEIDLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDT 252
+ E+D Y +L ++ A+E+EIK AYRK AL+ HPD+NP+D A E F ++S A +L+D
Sbjct: 13 VSEMDFYQLLGVEKMASEAEIKSAYRKLALKYHPDRNPNDAHAQEEFKKVSIAYSVLSDP 72
Query: 253 SARAAYD 273
+ R YD
Sbjct: 73 NKRRQYD 79
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/68 (48%), Positives = 47/68 (69%)
Frame = +1
Query: 73 IEEIDLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDT 252
++E Y VL ++ A+++E+KKAYRK AL+ HPDKNPD AE F ++SQA E+L+D
Sbjct: 2 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD---GAEQFKQISQAYEVLSDE 58
Query: 253 SARAAYDK 276
R YD+
Sbjct: 59 KKRQIYDQ 66
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = +1
Query: 85 DLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDTSARA 264
D Y +L + A ++IKKAYRK A + HPD+N DD A E F +LS A E+L+D RA
Sbjct: 24 DFYKILGVAKNANANQIKKAYRKLAKELHPDRNQDDEMANEKFQDLSSAYEVLSDKEKRA 83
Query: 265 AYDK 276
YD+
Sbjct: 84 MYDR 87
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 67.3 bits (157), Expect = 9e-12
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = +1
Query: 82 IDLYAVLDLQITATESEIKKAYRKKALQCHPDKNPD-DPKAAETFHELSQALEILTDTSA 258
+ LY VL +Q AT+ EIKKAYRK AL+ HPDKN D DP+ E F E++ A +L++ +
Sbjct: 37 LHLYNVLGIQKNATDDEIKKAYRKLALRYHPDKNLDGDPEKTEMFKEINYANAVLSNPNK 96
Query: 259 RAAYDKV 279
R YD++
Sbjct: 97 RRVYDEM 103
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 62.1 bits (144), Expect = 3e-10
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Frame = +1
Query: 76 EEIDLYAVLDLQITATESEIKKAYRKKALQCHPDK--NPDDPKAAE-TFHELSQALEILT 246
EEID YA+L++ AT+ EI KAYRK+ L HPD+ + D+ K AE F +L +A E+L
Sbjct: 23 EEIDFYAILNVPKDATDDEIIKAYRKRCLMFHPDRFVDNDEKKDAERVFVKLRRAHEVLL 82
Query: 247 DTSARAAYD 273
D RA YD
Sbjct: 83 DPKQRAIYD 91
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/64 (45%), Positives = 41/64 (64%)
Frame = +1
Query: 85 DLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDTSARA 264
D Y VL + AT+ EIKKAYRK AL+ HPDKN + A F E+++A ++L+D +
Sbjct: 4 DYYKVLGISKGATDDEIKKAYRKMALKYHPDKN-KEAGAENKFKEIAEAYDVLSDDKKKK 62
Query: 265 AYDK 276
YD+
Sbjct: 63 IYDQ 66
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = +1
Query: 91 YAVLDLQITATESEIKKAYRKKALQCHPDKNPDD---PKAAETFHELSQALEILTDTSAR 261
Y L + T+ + EIKKAYRK AL+ HPDK+ DD +A + F +++QA EILTD R
Sbjct: 9 YITLGISSTSDDVEIKKAYRKLALKWHPDKHTDDKSKEEAEQKFKKIAQAYEILTDKKKR 68
Query: 262 AAYDK 276
A D+
Sbjct: 69 ADLDR 73
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 85 DLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDTSARA 264
D Y +L ++ A + I+KA++K A++ HPD+N DDP A + F ++++A E+L D + R
Sbjct: 20 DYYELLGVERDADDRTIRKAFKKLAIKKHPDRNTDDPNAHDEFVKINKAYEVLKDENLRK 79
Query: 265 AYDK 276
YD+
Sbjct: 80 KYDQ 83
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 57.6 bits (133), Expect = 7e-09
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Frame = +1
Query: 91 YAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAE-TFHELSQALEILTDTSARAA 267
Y +L L+ T+ EI+KAYR + L+ HPDKN D+ + AE F E +A + L D R
Sbjct: 10 YKILHLEKGCTDKEIQKAYRAQCLKWHPDKNLDNKEEAERRFIEAKEAFDFLYDKEKREE 69
Query: 268 YD---KVLR----------AKASAK-------LRHQELDSXXXXXXXXXXXXXXXAASGT 387
YD + +R A+A K L +E + AA
Sbjct: 70 YDNREERIRMAQEHHSKRMAEADGKRKKLIEDLEKREKEFSNGGKRSADGSTPMTAAQQA 129
Query: 388 HTNLTDSQRLAKEIERLQREGSRLLLEEQQRMKNEIQKSVERMKEPVWDPSLNRIKIKWK 567
TD + +EIE ++R+ + + E+ + K + K+ + + R+ +KWK
Sbjct: 130 KKKKTDQRNFKEEIEAIRRQLEK-EVNEEVKQKATLMKTEREKHQKSQEKLTPRLLLKWK 188
Query: 568 VDKTDQNNSTYDEVTLRKFLKKYGDI 645
+ Y E +RK +G I
Sbjct: 189 TSE----GLDYSEDDIRKLFSTFGII 210
>Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical
protein T04A8.9 protein.
Length = 249
Score = 57.2 bits (132), Expect = 9e-09
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +1
Query: 85 DLYAVLDLQITATESEIKKAYRKKALQCHPDKNP-DDPKAAETFHELSQALEILTDTSAR 261
D Y VL L +A++ +IK AY K + Q HPD NP + +AA+ FH+++ A EIL+ R
Sbjct: 24 DHYKVLGLAQSASQKDIKSAYYKLSKQHHPDTNPTNKEEAAKKFHQVAMAYEILSSEDKR 83
Query: 262 AAYD 273
AYD
Sbjct: 84 KAYD 87
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +1
Query: 91 YAVLDLQITATESEIKKAYRKKALQCHPDKNPDD-PKAAETFHELSQALEILTDTSARAA 267
Y VL+++ A + +IKK YRK AL+ HPDKNPD + + F L A ++L+D R
Sbjct: 30 YEVLEVERDADDDKIKKNYRKLALKWHPDKNPDRIEECTQQFRLLQAAYDVLSDPREREF 89
Query: 268 YDK 276
YD+
Sbjct: 90 YDR 92
>Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical
protein B0035.14 protein.
Length = 401
Score = 54.4 bits (125), Expect = 7e-08
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = +1
Query: 85 DLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDTSARA 264
D Y +L + A++ +I+K YRK AL+ HPDK P A E F L A +L+DT R
Sbjct: 137 DYYEILKIDKKASDDDIRKEYRKLALKLHPDK-CRAPHATEAFKALGNAYAVLSDTDKRR 195
Query: 265 AYDK 276
YD+
Sbjct: 196 QYDQ 199
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +1
Query: 88 LYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDTSARAA 267
LY L+++ A++++IKK+Y K A + HPDKNPD + F E+S A E+L+ R
Sbjct: 14 LYTTLNVRPDASQADIKKSYFKLAKEYHPDKNPDH---GDKFKEISFAYEVLSSPEKRRL 70
Query: 268 YD 273
YD
Sbjct: 71 YD 72
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/64 (39%), Positives = 38/64 (59%)
Frame = +1
Query: 85 DLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDTSARA 264
D Y VL + A+ EIK AY+ A + HPDK D+ A+ F E+++A E+L+D +
Sbjct: 22 DPYKVLGISRRASAKEIKSAYKSLAREWHPDKRKDE-AASGRFMEIAEAYEVLSDPLRKE 80
Query: 265 AYDK 276
YD+
Sbjct: 81 RYDR 84
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = +1
Query: 4 EVTKTQTKNNIGFENLNKMTKINIEEIDLYAVLDLQITATESEIKKAYRKKALQCHPDKN 183
EV + G E+ ++ K + D Y +L ++ A++ EI KAYRK A + HPD
Sbjct: 353 EVNPDHREAKEGLEHAKRL-KTQAGKRDYYKILGVKRNASKREITKAYRKLAQKWHPDNF 411
Query: 184 PDD---PKAAETFHELSQALEILTDTSARAAYDK 276
D+ KA + F +++ A E+L D R +D+
Sbjct: 412 SDEEEKKKAEKKFIDIAAAKEVLQDEEKRRQFDQ 445
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +1
Query: 55 KMTKINIEEIDLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDD---PKAAETFHELS 225
K K + + D Y +L ++ A + EI KAYRK A + HPD D+ KA + F +++
Sbjct: 370 KRAKELVGKRDYYKILGVRRNANKREITKAYRKMAQKWHPDNFQDEKEKKKAEKKFIDIA 429
Query: 226 QALEILTDTSARAAYD 273
A E+L++ R A+D
Sbjct: 430 AAKEVLSNEEKRRAFD 445
>U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 4 protein.
Length = 274
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +1
Query: 91 YAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDTSARAAY 270
Y VL ++ TAT SEIK A+ ++ + HPD N + A +F EL A ++L + R Y
Sbjct: 30 YEVLGVESTATLSEIKSAFYAQSKKVHPD-NSSEESATASFLELKNAYDVLRRPADRRLY 88
Query: 271 DKVLR 285
D LR
Sbjct: 89 DYQLR 93
>Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical
protein K07F5.16 protein.
Length = 155
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 76 EEIDLYAVLDLQITATESEIKKAYRKKALQCHPDK-NPDDPKAAETFHELSQALEILTDT 252
+E LY +L +++ +I YR + CHPDK + + E F EL A ILT
Sbjct: 12 KEPKLYRLLGCDESSSIDQITAEYRARVRDCHPDKVKEHNTNSTEKFMELQNAYSILTSD 71
Query: 253 SARAAYDKVLRA 288
S R YD L +
Sbjct: 72 SRRKTYDSWLHS 83
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 85 DLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAET-FHELSQALEILTDTSAR 261
D Y L + + IKKAY + A + HPD N K A+T F E+S+A E+L+D + R
Sbjct: 44 DYYKTLGVDKKSDAKAIKKAYFQLAKKYHPDVNKT--KEAQTKFQEISEAYEVLSDDTKR 101
Query: 262 AAYD 273
YD
Sbjct: 102 QEYD 105
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 85 DLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAET-FHELSQALEILTDTSAR 261
D Y L + + IKKAY + A + HPD N K A+T F E+S+A E+L+D + R
Sbjct: 44 DYYKTLGVDKKSDAKAIKKAYFQLAKKYHPDVNKT--KEAQTKFQEISEAYEVLSDDTKR 101
Query: 262 AAYD 273
YD
Sbjct: 102 QEYD 105
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 85 DLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDTSARA 264
D Y +L++ A+ EI+ A+RK+ + HPDK P A E ++ A +L D + R
Sbjct: 27 DFYKILNVDKKASPDEIRIAFRKRIREVHPDK-CKHPSATEASKVVNNAFSLLMDPAKRR 85
Query: 265 AYD 273
YD
Sbjct: 86 QYD 88
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +1
Query: 76 EEIDLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDTS 255
++ D Y +L L A E IKKA+R + HPD+ D A+ F ++++A + LTD
Sbjct: 104 KDYDPYQILGLDQGADEKAIKKAWRDMSKIHHPDRGGD----AQFFDKIAKAHQALTDKE 159
Query: 256 ARAAYDK 276
AR ++K
Sbjct: 160 ARENWEK 166
>AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical
protein Y63D3A.6a protein.
Length = 579
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +1
Query: 76 EEIDLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDTS 255
++ D Y +L L A E IKKA+R + HPD+ D A+ F ++++A + LTD
Sbjct: 104 KDYDPYQILGLDQGADEKAIKKAWRDMSKIHHPDRGGD----AQFFDKIAKAHQALTDKE 159
Query: 256 ARAAYDK 276
AR ++K
Sbjct: 160 ARENWEK 166
>AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 30 protein.
Length = 238
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 91 YAVLDLQITATESEIKKAYRKKALQCHPDKNPDD-PKAAETFHELSQALEILTD 249
Y VL + + KK Y+K +L HPDKNPDD +A + F + +A++ + D
Sbjct: 43 YEVLQIDLDTDIEAAKKKYKKLSLLVHPDKNPDDRERADKAFDIVKKAIKQMED 96
>Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical
protein T24H10.3 protein.
Length = 242
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +1
Query: 88 LYAVLDLQITATESEIKKAYRKKALQCHPDKN---PDDPKAAET-FHELSQALEILTDTS 255
LY +L ++ E +KK Y +++++ HPDK+ +D + T F L++A +IL+D
Sbjct: 15 LYELLGVKKDCDEKALKKGYYRQSMRWHPDKSNLVEEDMQTYTTKFQLLNKAYQILSDEE 74
Query: 256 ARAAYDK 276
R YD+
Sbjct: 75 KRKIYDE 81
>Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical
protein B0035.2 protein.
Length = 337
Score = 35.5 bits (78), Expect = 0.033
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +1
Query: 37 GFENLNKMTKINIEEIDLYAVLDLQITATESEIKKAYRKKALQCHPD--KNPDDP-KAAE 207
G EN + ++N EE D + ++ KAYR A + HPD KN ++ A E
Sbjct: 33 GLENCYDVLEVNREEFD------------KQKLAKAYRALARKHHPDRVKNKEEKLLAEE 80
Query: 208 TFHELSQALEILTDTSARAAYDKVL 282
F ++ A E L D A+ YD L
Sbjct: 81 RFRVIATAYETLKDDEAKTNYDYYL 105
>Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical
protein C01G10.12 protein.
Length = 191
Score = 34.7 bits (76), Expect = 0.058
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +1
Query: 91 YAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDTSARAAY 270
Y ++ + +AT EI+ A+ KK Q HPD++ K+ + + E + AY
Sbjct: 20 YEIIGVSASATRQEIRDAFLKKTKQLHPDQSRKSSKSDSRVGWATGSSETEQFMLVKEAY 79
Query: 271 DKVLRAKASAK 303
D VLR + K
Sbjct: 80 D-VLRNEEKRK 89
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 133 IKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDTSA 258
I++ Y K A + HPDKNP+ E F ++ A E+L+ +A
Sbjct: 1341 IRRQYYKLAAKYHPDKNPE---GREMFERINAAYELLSSETA 1379
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 133 IKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDTSA 258
I++ Y K A + HPDKNP+ E F ++ A E+L+ +A
Sbjct: 1341 IRRQYYKLAAKYHPDKNPE---GREMFERINAAYELLSSETA 1379
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 133 IKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTDTSA 258
I++ Y K A + HPDKNP+ E F ++ A E+L+ +A
Sbjct: 1341 IRRQYYKLAAKYHPDKNPE---GREMFERINAAYELLSSETA 1379
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 31.1 bits (67), Expect = 0.71
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 49 LNKMTKINIEEIDLYAVLDL---QITATESEIKKAYRKKALQCHPDK 180
L K+ + + D Y VL L + AT EI+ YR+K L+ HPDK
Sbjct: 86 LMKLDPNDCKNQDHYKVLGLSKLRWQATSDEIRFCYRQKVLKHHPDK 132
>Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical
protein W07A8.3 protein.
Length = 784
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +1
Query: 121 TESEIKKAYRKKALQCHPDKNPDDPK---AAETFHELSQA 231
T +IKK YRK L HPDK P A F EL+ A
Sbjct: 734 TPDQIKKHYRKACLVVHPDKLTGSPHLSLAKMAFTELNDA 773
>AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein.
Length = 784
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +1
Query: 121 TESEIKKAYRKKALQCHPDKNPDDPK---AAETFHELSQA 231
T +IKK YRK L HPDK P A F EL+ A
Sbjct: 734 TPDQIKKHYRKACLVVHPDKLTGSPHLSLAKMAFTELNDA 773
>Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light
chain (isoform 1) protein.
Length = 540
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 130 EIKKAYRKKALQCHPDK-NPDDPKAAETFHELSQA 231
E++K Y K+AL+ + K PDDP A+T + LS A
Sbjct: 350 EVEKYY-KRALEIYESKLGPDDPNVAKTKNNLSSA 383
>U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light
chain protein 2,isoform b protein.
Length = 540
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 130 EIKKAYRKKALQCHPDK-NPDDPKAAETFHELSQA 231
E++K Y K+AL+ + K PDDP A+T + LS A
Sbjct: 350 EVEKYY-KRALEIYESKLGPDDPNVAKTKNNLSSA 383
>U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light
chain protein 2,isoform c protein.
Length = 501
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 130 EIKKAYRKKALQCHPDK-NPDDPKAAETFHELSQA 231
E++K Y K+AL+ + K PDDP A+T + LS A
Sbjct: 350 EVEKYY-KRALEIYESKLGPDDPNVAKTKNNLSSA 383
>U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light
chain protein 2,isoform a protein.
Length = 522
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 130 EIKKAYRKKALQCHPDK-NPDDPKAAETFHELSQA 231
E++K Y K+AL+ + K PDDP A+T + LS A
Sbjct: 371 EVEKYY-KRALEIYESKLGPDDPNVAKTKNNLSSA 404
>U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light
chain protein 2,isoform d protein.
Length = 531
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 130 EIKKAYRKKALQCHPDK-NPDDPKAAETFHELSQA 231
E++K Y K+AL+ + K PDDP A+T + LS A
Sbjct: 350 EVEKYY-KRALEIYESKLGPDDPNVAKTKNNLSSA 383
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +1
Query: 403 DSQRLAKEIE---RLQREGSRLLLEEQQRMKNEIQKSVERMKE 522
+ +RL KE E R+QRE + +EQ R++ E ++ + R +E
Sbjct: 2633 EEERLRKEAEERMRIQRENEERVRQEQMRLEAEERERIRRAEE 2675
>Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light
chain (isoform 2) protein.
Length = 522
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 130 EIKKAYRKKALQCHPDK-NPDDPKAAETFHELSQA 231
E++K Y K+AL+ + K PDDP A T + LS A
Sbjct: 371 EVEKYY-KRALEIYESKLGPDDPNVANTKNNLSSA 404
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/42 (33%), Positives = 29/42 (69%)
Frame = +1
Query: 397 LTDSQRLAKEIERLQREGSRLLLEEQQRMKNEIQKSVERMKE 522
L + ++ +E++RL+ + LLEEQQR++ ++++ ER+ E
Sbjct: 211 LEEQRKRNEELKRLRIAEEKRLLEEQQRLREQMER--ERLAE 250
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/103 (24%), Positives = 42/103 (40%)
Frame = +1
Query: 211 FHELSQALEILTDTSARAAYDKVLRAKASAKLRHQELDSXXXXXXXXXXXXXXXAASGTH 390
F L +E + AY +V + R EL S T
Sbjct: 423 FEGLRHDMEQTMSKMEKTAYAQVENLEHQLTERSTELKSLKGDLDDTVTARKVAEKRATQ 482
Query: 391 TNLTDSQRLAKEIERLQREGSRLLLEEQQRMKNEIQKSVERMK 519
TN +LA E++ +RE +++L ++QQ K +++K +E K
Sbjct: 483 TN-EKVNKLANELKD-EREINQMLRKDQQVWKGQVEKLIESQK 523
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 85 DLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHEL 222
D Y+V L+ ++ +IK+ Y++ A PDK D AA+ +EL
Sbjct: 660 DAYSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTID--AADQVYEL 703
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 85 DLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHEL 222
D Y+V L+ ++ +IK+ Y++ A PDK D AA+ +EL
Sbjct: 660 DAYSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTID--AADQVYEL 703
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 85 DLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHEL 222
D Y+V L+ ++ +IK+ Y++ A PDK D AA+ +EL
Sbjct: 660 DAYSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTID--AADQVYEL 703
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 85 DLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHEL 222
D Y+V L+ ++ +IK+ Y++ A PDK D AA+ +EL
Sbjct: 659 DAYSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTID--AADQVYEL 702
>Z92831-6|CAB07365.2| 355|Caenorhabditis elegans Hypothetical
protein F22G12.1 protein.
Length = 355
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 385 THTNLTDSQRLAKEIERLQREGSRLLLE-EQQRMKNEIQKSVERMKEPVWDPSLNRIKIK 561
+H N D ++L E+E ++R+G + + E EQQR E Q++ + + LN K +
Sbjct: 85 SHKN--DKKKLESELESIKRKGEKDVREIEQQREALEKQRTEDLVNHQETMRKLNETKFE 142
Query: 562 WKVDKTDQNNS 594
K D+ +
Sbjct: 143 AIKKKRDEQQT 153
>Z92777-12|CAJ58496.1| 355|Caenorhabditis elegans Hypothetical
protein F22G12.1 protein.
Length = 355
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 385 THTNLTDSQRLAKEIERLQREGSRLLLE-EQQRMKNEIQKSVERMKEPVWDPSLNRIKIK 561
+H N D ++L E+E ++R+G + + E EQQR E Q++ + + LN K +
Sbjct: 85 SHKN--DKKKLESELESIKRKGEKDVREIEQQREALEKQRTEDLVNHQETMRKLNETKFE 142
Query: 562 WKVDKTDQNNS 594
K D+ +
Sbjct: 143 AIKKKRDEQQT 153
>AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical
protein Y51A2D.12 protein.
Length = 334
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = -2
Query: 561 LNLNSIQTWIPNRFFHSF-YTFLY--FIFH 481
LNLN+ + W P FH+F + F Y +IF+
Sbjct: 82 LNLNNTENWFPLNIFHTFHFEFAYTQYIFN 111
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 388 HTNLTDSQRLAK-EIERLQREGSRLLLEEQQRMKNEIQKSVERMKEPVWDPSLNRIKIKW 564
H + RL K E +RL++ E +++ +N +K E + S+ R +K+
Sbjct: 623 HNKTKEDFRLEKIETKRLRKALKESQKESEEKSQNIAEKDQEMLLLKEHVESIQREFLKY 682
Query: 565 KVDKTDQNNST 597
K D + NN T
Sbjct: 683 KSDMNNVNNET 693
>Z75531-7|CAA99798.2| 316|Caenorhabditis elegans Hypothetical
protein C54D10.8 protein.
Length = 316
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 409 QRLAKEIERLQREGSRLLLEEQQRMKNEIQKSVERMKEPV-WDPSLNRIKIKWKVDKTDQ 585
++L + E Q+ ++ E R+K E ++S+E+M E + L+RIKI ++ Q
Sbjct: 60 EQLVAQRESEQKVKDQMAHFENMRLKQETKRSLEKMDEDLERSRELHRIKIAKINNQFMQ 119
Query: 586 NNSTYDE 606
N + E
Sbjct: 120 NKKDFAE 126
>Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical
protein F01G4.3 protein.
Length = 1266
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +1
Query: 67 INIEEIDLYAVLDLQITATESEIK--KAYRKKALQCHPDKNPDDPK 198
INIEE+D++ +LD+ +T+ E I A KK+ ++ P+D K
Sbjct: 181 INIEEMDMFDLLDM-VTSNEYIIHTVAAPVKKSESIESEETPEDDK 225
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/47 (25%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +1
Query: 403 DSQRLAKEIERLQREGSRLLLEEQQRMKNE---IQKSVERMKEPVWD 534
+ QRLA+ I++++R + +E+Q+ +NE ++ ++E +++ + D
Sbjct: 499 ERQRLAEHIDQVRRNAEKDAMEQQKTYQNEMTQLKATIENLQKELSD 545
>AC024819-1|AAF59589.1| 223|Caenorhabditis elegans Hypothetical
protein Y55B1AL.1 protein.
Length = 223
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = +1
Query: 415 LAKEIERLQREGSRLLLEEQQR---MKNEIQKSVERMKEPVWDPSLNRIKI 558
+ E+E ++R G+RLL +Q+ + + I++ +E+ KE V +L R+++
Sbjct: 72 IENELEEIERTGARLLSIVEQKDNFLASRIRRFMEKSKELVGIETLLRLQL 122
>Z73969-20|CAA98241.1| 643|Caenorhabditis elegans Hypothetical
protein C12D8.11 protein.
Length = 643
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 388 HTNLTDSQRLAKEIERLQREGSRLLLEEQQRMKNEIQKSVERMK--EPVWD 534
H NL DS+ + +RL+RE + +K + + SVE + E VWD
Sbjct: 259 HPNLMDSRSHGQSEDRLEREQLFRFAVKGDLVKRKRKMSVEEVAEVEKVWD 309
>U80024-9|AAK18886.1| 300|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 10 protein.
Length = 300
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -2
Query: 171 VAL*SLFSVCFFDLRFGCSYL*IKHSI*VNFFNIYFRHFI*IFK-AYVIFCLSFSYFS 1
+ + S F F ++ F I+H + F+ I+ + AY+IFC+ +SYF+
Sbjct: 26 IGILSSFFTIFMNIYFIKKITRIRHRMIFFFYRIFVDISYGVLACAYMIFCILYSYFT 83
>U70854-12|AAB09150.1| 263|Caenorhabditis elegans Hypothetical
protein F38A5.6 protein.
Length = 263
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 22 TKNNIGFE-NLNKMTKINIEEIDLYAVLDLQITATESEIKKAYRKKALQCHPDKNP 186
TK FE N++K+T + + V++LQ+ + KA KKA+ C P +NP
Sbjct: 47 TKLEPRFERNIDKLTSYHNLIYKIVNVIELQVQF----MPKAMAKKAVLCAPGENP 98
>U61948-7|AAB03148.1| 195|Caenorhabditis elegans Hypothetical
protein C46A5.8 protein.
Length = 195
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 484 KNEIQKSVERMKEPVWDPSLNRIKIKWKVDKTDQNNSTYDEV 609
KN I+ + ER+K W +++ WK+ KT QN ST D++
Sbjct: 95 KNRIENACERLKPCEWSKTID----TWKI-KT-QNPSTRDQI 130
>U21487-1|AAA96949.1| 643|Caenorhabditis elegans ribonucleoprotein
Ro autoantigenhomolog protein.
Length = 643
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 388 HTNLTDSQRLAKEIERLQREGSRLLLEEQQRMKNEIQKSVERMK--EPVWD 534
H NL DS+ + +RL+RE + +K + + SVE + E VWD
Sbjct: 259 HPNLMDSRSHGQSEDRLEREQLFRFAVKGDLVKRKRKMSVEEVAEVEKVWD 309
>L41729-1|AAC41575.1| 643|Caenorhabditis elegans Ro
ribonucleoprotein autoantigen protein.
Length = 643
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 388 HTNLTDSQRLAKEIERLQREGSRLLLEEQQRMKNEIQKSVERMK--EPVWD 534
H NL DS+ + +RL+RE + +K + + SVE + E VWD
Sbjct: 259 HPNLMDSRSHGQSEDRLEREQLFRFAVKGDLVKRKRKMSVEEVAEVEKVWD 309
>AL021479-8|CAA16325.1| 643|Caenorhabditis elegans Hypothetical
protein C12D8.11 protein.
Length = 643
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 388 HTNLTDSQRLAKEIERLQREGSRLLLEEQQRMKNEIQKSVERMK--EPVWD 534
H NL DS+ + +RL+RE + +K + + SVE + E VWD
Sbjct: 259 HPNLMDSRSHGQSEDRLEREQLFRFAVKGDLVKRKRKMSVEEVAEVEKVWD 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.128 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,383,556
Number of Sequences: 27780
Number of extensions: 197715
Number of successful extensions: 757
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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