Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_K19
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          25   0.63 
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    25   0.84 
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    25   0.84 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   2.6  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   3.4  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   3.4  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    23   3.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.5  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   7.8  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 43  ENLNKMTKINIEEIDLYAVLDLQITATE 126
           EN+N   +IN E +D Y    L   ATE
Sbjct: 123 ENVNNAARINWEYLDKYKPTPLGAVATE 150


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +1

Query: 91  YAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALE 237
           Y  +D+ +      +  AY    + C  D+ P  P AAE    L  ALE
Sbjct: 28  YDNVDIDVVLNTERLLNAY----VNCLLDQGPCTPDAAELKRNLPDALE 72


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +1

Query: 91  YAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALE 237
           Y  +D+ +      +  AY    + C  D+ P  P AAE    L  ALE
Sbjct: 28  YDNVDIDVVLNTERLLNAY----VNCLLDQGPCTPDAAELKRNLPDALE 72


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 164 NATQTKIQMTLKRQKHFTNYPKH*KY 241
           N T T +QM +K    FT+     KY
Sbjct: 579 NQTYTSLQMAMKNPIEFTDLSNERKY 604


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 187 LDFCLGGIVKPFFC 146
           L FC   ++ PFFC
Sbjct: 46  LPFCGPNVINPFFC 59


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 187 LDFCLGGIVKPFFC 146
           L FC   ++ PFFC
Sbjct: 45  LPFCGPNVINPFFC 58


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = +1

Query: 421 KEIERLQREGSRLLLEEQQRMKNEIQKSVERMKE 522
           +E ER QRE S  +  +QQ+ + + Q+  ++ ++
Sbjct: 73  REREREQREHSDRVTSQQQQQQQQQQQQDQQQQQ 106


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 408 SETCKRD*KATKRGKSSIIGRATKNEK*NTKK 503
           S TCK+D K    G    I +A K  K   +K
Sbjct: 577 SSTCKKDKKNAGSGSRFTIYKANKASKKKREK 608


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 434 GYKEREVVYYW 466
           GY +R+V+Y W
Sbjct: 152 GYTKRDVIYKW 162


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.314    0.128    0.350 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,681
Number of Sequences: 438
Number of extensions: 2422
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)