Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_K15
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    51   8e-09
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    51   8e-09
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   1.9  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               21   7.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.8  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 51.2 bits (117), Expect = 8e-09
 Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
 Frame = +2

Query: 62  VTNMTSLLSYETLVHAIAGATGSVVGMTIFYPLDTLRSRIQVEDSK---KLQGSTL-ELL 229
           V   T  L Y     A  GA G+   +   YPLD  R+R+  +  K   + + + L   L
Sbjct: 105 VDKNTQFLRYFVGNLASGGAAGAT-SLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCL 163

Query: 230 IKLANEEGIESLYRGLSPVLQSLSVSNFVYFYSFHALRKLYSQPTSALRDLLFGL--IAG 403
            K+   +GI  LYRG    +Q + +    YF  +   R +   P      + +G+  +  
Sbjct: 164 TKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVT 223

Query: 404 SINVILTSPLWVVNTRIKLEKNNYKN--LFEGLLE----LARTEGAKGLWSGTVPSLLLV 565
           ++  I++ P   V  R+ ++    K+  L++  L     + +TEG    + G   ++L  
Sbjct: 224 TVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILRG 283

Query: 566 SNPAIQFMVYESLK 607
           +  A+  ++Y+ +K
Sbjct: 284 TGGALVLVLYDEIK 297



 Score = 30.3 bits (65), Expect = 0.017
 Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
 Frame = +2

Query: 353 SQPTSALRDLLFGLIAGSINVILTSPLWVVNTRIKL--------EKNNYKNLFEGLLELA 508
           + P +  +D L G +A +I+    +P+  V   +++        E+  YK + +  + + 
Sbjct: 5   ADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIP 64

Query: 509 RTEGAKGLWSGTVPSLL-LVSNPAIQFMVYESLKRKFMSQGSFHTYTSFL 655
           + +G    W G + +++      A+ F   +  K+ F+  G     T FL
Sbjct: 65  KEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFL--GGVDKNTQFL 112


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 51.2 bits (117), Expect = 8e-09
 Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
 Frame = +2

Query: 62  VTNMTSLLSYETLVHAIAGATGSVVGMTIFYPLDTLRSRIQVEDSK---KLQGSTL-ELL 229
           V   T  L Y     A  GA G+   +   YPLD  R+R+  +  K   + + + L   L
Sbjct: 105 VDKNTQFLRYFVGNLASGGAAGAT-SLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCL 163

Query: 230 IKLANEEGIESLYRGLSPVLQSLSVSNFVYFYSFHALRKLYSQPTSALRDLLFGL--IAG 403
            K+   +GI  LYRG    +Q + +    YF  +   R +   P      + +G+  +  
Sbjct: 164 TKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVT 223

Query: 404 SINVILTSPLWVVNTRIKLEKNNYKN--LFEGLLE----LARTEGAKGLWSGTVPSLLLV 565
           ++  I++ P   V  R+ ++    K+  L++  L     + +TEG    + G   ++L  
Sbjct: 224 TVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILRG 283

Query: 566 SNPAIQFMVYESLK 607
           +  A+  ++Y+ +K
Sbjct: 284 TGGALVLVLYDEIK 297



 Score = 30.3 bits (65), Expect = 0.017
 Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
 Frame = +2

Query: 353 SQPTSALRDLLFGLIAGSINVILTSPLWVVNTRIKL--------EKNNYKNLFEGLLELA 508
           + P +  +D L G +A +I+    +P+  V   +++        E+  YK + +  + + 
Sbjct: 5   ADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIP 64

Query: 509 RTEGAKGLWSGTVPSLL-LVSNPAIQFMVYESLKRKFMSQGSFHTYTSFL 655
           + +G    W G + +++      A+ F   +  K+ F+  G     T FL
Sbjct: 65  KEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFL--GGVDKNTQFL 112


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -1

Query: 386 KVDRAMLMLAGNIVFVMH-GMN 324
           KV      + GN+VFV H GMN
Sbjct: 792 KVGNVQAYIDGNVVFVCHNGMN 813


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 391 FNCWKYQCYFNITAMGCKYKNKVRK 465
           F+  K+  Y N T M    K+ +RK
Sbjct: 72  FDVSKFDVYLNDTDMDMDLKDSIRK 96


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 146 IFYPLDTLRSRIQVEDSKKLQGST 217
           +F P   +R ++ + D  K QGS+
Sbjct: 764 LFQPDKNIRRKVTMGDKSKKQGSS 787


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 146 IFYPLDTLRSRIQVEDSKKLQGST 217
           +F P   +R ++ + D  K QGS+
Sbjct: 854 LFQPDKNIRRKVTMGDKSKKQGSS 877


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,264
Number of Sequences: 438
Number of extensions: 3530
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)