Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_K10
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          29   0.052
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.4  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    22   4.5  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    22   4.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   5.9  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   7.8  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 0.052
 Identities = 19/52 (36%), Positives = 22/52 (42%)
 Frame = -1

Query: 269 CSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTXPEPLST 114
           C VP      PSV    S P     PR   T+ + HH    RP T  EP +T
Sbjct: 121 CEVPESRDGPPSVSLS-SPPREPGTPRINFTKLKRHHPRYKRPRTTFEPRAT 171


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 368  LRVAPEEHPVLLTEAPLNPKANREKM 445
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +1

Query: 511 AVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRP 642
           ++  +++HR        C P   +L +I + P HP +  S S P
Sbjct: 62  SLTAQAHHRLYPAFSSSCDPVPGNLEQIGSRPLHPPAS-STSLP 104


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 155 LRNRPCTXPEPLSTTNAAT 99
           LR  PC  P P S  N A+
Sbjct: 623 LRTLPCLLPRPKSENNFAS 641


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 155 LRNRPCTXPEPLSTTNAAT 99
           LR  PC  P P S  N A+
Sbjct: 591 LRTLPCLLPRPKSENNFAS 609


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 164 HHLLRNRPCTXPEPLSTTNAATSSS 90
           HHL   +    PEP  ++ ++T SS
Sbjct: 342 HHLHVAKQMASPEPPKSSESSTGSS 366


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 571 VGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 479
           VGD +A ++ D  G    +  E+G  G   G
Sbjct: 42  VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,884
Number of Sequences: 438
Number of extensions: 5249
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)