Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_K08
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein glycotr... 53 3e-08
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 1.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 1.8
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.1
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 3.1
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 26 5.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.2
SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|... 25 7.2
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 25 9.5
SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory... 25 9.5
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 25 9.5
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 9.5
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 25 9.5
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 25 9.5
>SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein
glycotransferase subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 53.2 bits (122), Expect = 3e-08
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 2/144 (1%)
Frame = +3
Query: 183 HSQFFKSLQERGYGLTFKLADDANLVLSKYGEYLYKNLIVFAPSVLEFGGQVDSEAITKF 362
+S F +SL +R + + D + L +YGE LY NLI+ + G +++ +F
Sbjct: 35 YSTFLQSLTDRDFDVKTSYIKDESAKLFEYGERLYDNLILLSSQSKSLGPVFSPKSLLEF 94
Query: 363 IDDXXXXXXXXXXXXXDVYREIASECGFEMDEESAAVIDHFNYDVTDEGDHTRIVVSPKN 542
+ + RE+ + + E + V+DHFN+ EG I++
Sbjct: 95 VQSGGNLFVVAGSQLPEGIRELGRQLDMFLAERQSVVVDHFNH---AEGSDDIILLD--G 149
Query: 543 LIKAPTIVGEQN--TQPLLFEGTG 608
+ + P I+ ++ P+L++G G
Sbjct: 150 ISENPYIISDETRAAGPILYKGIG 173
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.9 bits (59), Expect = 1.4
Identities = 26/124 (20%), Positives = 54/124 (43%)
Frame = -2
Query: 598 SNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSISNPHSEAISL 419
S++ S +I + + T+ + S S+ +S L S T + +S+ + + SL
Sbjct: 122 SSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSL 181
Query: 418 YTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANTMRFLYKYSPYFDRTRFASSA 239
++ A+ SS+N ++ +T SST +N+ S + T A++
Sbjct: 182 SSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATAT 241
Query: 238 SLNV 227
S ++
Sbjct: 242 SSSI 245
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 1.8
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Frame = -2
Query: 622 LSTISPVPSNSRGCVFCSPTIVGALIRF--LGDTTMRVWSPSSVTS*LKWSMTAADSSSI 449
LS+ S V S+S S T+ + + + T+ S SS S S TA+ SSS
Sbjct: 210 LSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSS 269
Query: 448 SNPHSEAISLYTSPAAALPAI------RRFPPSSMNLVMASLSTCPPNSSTEGANTM--R 293
S+ S + S +SP + I P S+ + + +S S+ SST +++M
Sbjct: 270 SSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSS 329
Query: 292 FLYKYSPYFDRTRFASSAS 236
+ SP + +SS+S
Sbjct: 330 SSFSSSPTSSSSTISSSSS 348
Score = 25.4 bits (53), Expect = 7.2
Identities = 25/107 (23%), Positives = 50/107 (46%)
Frame = -2
Query: 619 STISPVPSNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSISNP 440
S+ S P+++ + S + + L ++M S SS S S ++ SSS S+P
Sbjct: 294 SSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSM---SSSSSFSSSPTSSSSTISSSSSSP 350
Query: 439 HSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANT 299
S + S TS + + + SS + ++L++ +SS +++
Sbjct: 351 SSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSS 397
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 397 LPAIRRFPPSSMNLVMASLSTCPPNSST 314
+P++ + PPSS+ A ST PP+ S+
Sbjct: 1498 IPSVAQQPPSSVAPATAPSSTLPPSQSS 1525
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 26.6 bits (56), Expect = 3.1
Identities = 24/109 (22%), Positives = 47/109 (43%)
Frame = -2
Query: 625 ILSTISPVPSNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSIS 446
+ S++ P G + C + ++ S SSV+S SSS S
Sbjct: 90 VSSSLCTTPCPGYGSLMCGGDLYWSVYLTGNGVLQTTVSSSSVSS-------TTSSSSSS 142
Query: 445 NPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANT 299
+P S + + TSP+++ + SS + +S S+ +SS+ +++
Sbjct: 143 SPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 191
Score = 25.0 bits (52), Expect = 9.5
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = -2
Query: 529 TTMRVWSPSSVTS*LKWSMTAADSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNLVM 350
+T SPSS +S S +++ SSS S+ S + S +S +++ + SS +
Sbjct: 148 STTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----SSSSSSSS 202
Query: 349 ASLSTCPPNSSTEGANT 299
+S S+ P SST +++
Sbjct: 203 SSSSSVPITSSTSSSHS 219
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.8 bits (54), Expect = 5.5
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 10/164 (6%)
Frame = -2
Query: 601 PSNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSI------SNP 440
PS+S+ S +I G+ + L +T+ SP+ V+S + ++ ++ DSSS S+
Sbjct: 643 PSSSQTTPTSSSSITGS--QSLKETS----SPAYVSSTVSYTSSSVDSSSTYNSTGSSSS 696
Query: 439 HSEAIS--LYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANTMRFLYKYSPYF 266
S++ S Y+ P + + SS + +S+S + G NT+ S
Sbjct: 697 DSQSFSGTTYSDPTTTITSEVSSILSSPTSMQSSVSRPQSSGDASGFNTIFTSISQSSDG 756
Query: 265 DRTRF--ASSASLNVKP*PRSCNDLKNCECVSLIFKLSIRTKVS 140
+ + + +S++S N P++ + I + SI T VS
Sbjct: 757 ETSGYTISSNSSQNSASEPQTAFTSSSSSATPTITQSSISTSVS 800
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 7.2
Identities = 21/96 (21%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Frame = -2
Query: 565 TIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSISNPHSEAISLYTSPAAALPAI 386
++ + + ++++ S + ++S S + S+ S SE S S ++A+P+
Sbjct: 462 SVASSSVSVPSSSSVQPQSSTPISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPST 521
Query: 385 RRFPPSS------MNLVMASLSTCPPNSSTEGANTM 296
PSS M V++S S+ P +SS++ ++++
Sbjct: 522 SSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSI 557
>SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 540
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = -2
Query: 463 DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGAN 302
+S+ IS P+SE + Y ++ +++ + ++TC P S E N
Sbjct: 35 NSTKISPPYSENVEGYPKVKIEKSLPYKYDNCKLSICVPIVTTCIPYHSVENLN 88
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 25.0 bits (52), Expect = 9.5
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = -2
Query: 460 SSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANTMRFLYK 281
SSS N + + + + A +I R PPS++ SL PP S+ G +
Sbjct: 25 SSSGVNGTNGGMKQVSPVSTARTSIARRPPSTVGSQTGSLVNAPPKRSS-GIERFDHVTG 83
Query: 280 YSPYFDRTRFASSASLNVKP 221
+ +T ++ NVKP
Sbjct: 84 TAENRPQTPSTKASVANVKP 103
>SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory
subunit Dfp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 545
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 80 ENHDNFRDIDHFF 118
EN+DNF+D+D F
Sbjct: 523 ENNDNFKDLDELF 535
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 442 PHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSST 314
P+S + T+PA+A P PS+ N S S+ N T
Sbjct: 388 PNSSTSNPSTAPASASPLASTLKPSTANDTNGSSSSSSSNPRT 430
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 162 NLNIKETHSQFFKSLQERGYGLTFKLADDANLVLSKYGEYLYKNLIVFAPSVLE 323
NLN + F +L+E +NLV YGE Y N++ P V E
Sbjct: 3 NLNTELDFFVSFSALKEENISQLKVYWAQSNLVELYYGESFYINIVCSRPIVDE 56
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 376 PPSSMNLVMASLSTCPPNSSTEG 308
PP S+N ASL T P+ S EG
Sbjct: 623 PPISLNHFKASLRTIRPSVSQEG 645
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 472 TAADSSSISNPHSEAISLYTSPAAALPAIRRFPPSS 365
T A SS S HSE I+ TS + PPSS
Sbjct: 106 TKATSSRTSYDHSEGITSTTSASPPSAPAPPLPPSS 141
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,595,067
Number of Sequences: 5004
Number of extensions: 51511
Number of successful extensions: 178
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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